Tper010963.1
Basic Information
- Insect
- Trionymus perrisii
- Gene Symbol
- tfip11_1
- Assembly
- GCA_900050545.1
- Location
- FIZV01005209.1:1-1443[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.1e-61 7.5e-57 193.6 14.0 100 275 1 173 1 173 0.99 2 2 0.12 1.1e+03 -0.4 0.3 106 124 183 201 174 205 0.52
Sequence Information
- Coding Sequence
- TCGTGGCAATGTCGTCAATGGTCACCTATGGTTGATTTTATTATGAAGTGGATTCCTTTTATATCGaaaggaattttagaaaatattttacaagacATAATATTGAGACGAATTCAACAAGATGTAGACGAATGGAATCCGTTAACCGATTGTGTTCCAATTCACTCTTGGATATATCCTTGGATCAATTTTCTGGgtaaaaatttcgaaaccaGTGTATATCCAACCATTAGACATAAACTTTCCAAAGCTCTGATCAGTTGGCATCCATCTGATGGGTCGGCGAGATTAATGTTGCAGCCGTGGATGAGTGTATTCGACCCGGGAGAAATGAATGCATTTTTGGTAAACAATATCGTACCTAAGTTACGAATCACCTTACACGATTTCGTTATTAATCCTCATCAGCAATGCCTAGATAATTGGAAATGGGTAGTCGAATGGTCTGAAATGATTCCTGCACATACGATGGCTCAACTATTAGATCAAAGCTTCTTTCCTAAATGGTTACAAACGCTTAATGCTTGGCTACATATGAACCCCGATGCTGATCAAATTAACCAATGGCTGACCGGCTGGAAAAGTCTTATACCCGATAACGTCAAAACACAACCCGTTATCAacg
- Protein Sequence
- SWQCRQWSPMVDFIMKWIPFISKGILENILQDIILRRIQQDVDEWNPLTDCVPIHSWIYPWINFLGKNFETSVYPTIRHKLSKALISWHPSDGSARLMLQPWMSVFDPGEMNAFLVNNIVPKLRITLHDFVINPHQQCLDNWKWVVEWSEMIPAHTMAQLLDQSFFPKWLQTLNAWLHMNPDADQINQWLTGWKSLIPDNVKTQPVIN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -