Tvar004945.1
Basic Information
- Insect
- Trilocha varians
- Gene Symbol
- Zmiz1
- Assembly
- GCA_030269945.2
- Location
- AP028261.1:7313598-7321540[+]
Transcription Factor Domain
- TF Family
- zf-MIZ
- Domain
- zf-MIZ domain
- PFAM
- PF02891
- TF Group
- Zinc-Coordinating Group
- Description
- This domain has SUMO (small ubiquitin-like modifier) ligase activity and is involved in DNA repair and chromosome organisation [1][2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.12 1.1e+03 0.1 0.9 4 24 453 473 450 478 0.88 2 2 1.1e-25 1e-21 77.1 4.6 1 50 537 586 537 586 0.98
Sequence Information
- Coding Sequence
- ATGAGCAAAGTTTTATTGTATGGGACGGCGAACTCTGATAGTACGGCAGGGTACGCGGGGTCAACTGTTACATACGCGGGAGCACCAGCTCCCAGTAGTGGGAAAAGAAATCCTCTGCAAGGAACAATTGGATACCGAGTTAATGTCCCTGGAAGCTATGGGTACGCCGGCGGTCCGGGCGCGATGAGCGGTGGCGGCGAAAACGCTCAGTTTGGCGCCACCGCCGCCATGGTAGCCGCGGCCACGACGGCCGCGATGCAGGATTCGCAGCCATTTTCCCAGatGCAGAGCAACATGACGATGGGAAATCCTCAATATGGTGCGATGAACGGCTACGGCCAACAACGCAGTCATAATCCGGGAGTCACCGGAATGGGGATGGGAGGAAATGGAAGTATGAATGGCATGAACGGAATGAATGGTATGGCCGGAATGGGTCAAATGGGAAATGCTGCCATGAACGGTATGAATGGAATGAACCCTATGGCACAGATGGCAAATATGGGCATGCATGCCAATATGATGCCTGGACAGATGGGTCCCGGCCAAATGAGTACCTCAACAAAAATGGGACCCAGTTATCAAAGGCGGCATACGCCATATCCATCAGGAACAATGCTCATGGGACAGCGAAAATCGCAATACATGGGTGGACAACCTAATTTTGGACCAAACCAGTACCCCGCAGGGTACGGCGGGCGGCCCGGTTTCCAAAGTCAGTACCCTCCTCAGCAACCTTTAGGCCCTAGTGGTAATTTTGGAGCTGCAATGAGGGGAACCATAAGACAGTCAACACCGCCTTATACGAATCAGCAACAATATTTCAACGGCGGCGTGCCGAATCAATTTCCACAACACCAAAGTGGGACTGCGCAGTATGCAGGACAATATGGCGGACAATTTGCTCAGGAAGTAGCCATGAGAACAAACATGAGTTACCAACATAGTCCAGTGCCAGGAAATCCAACTCCGCCTTTAACACCAAGTATACAACCATATATTAGTCCGAATGGTGACGTGAAACCCCACTTCAACGAGCTCAAACCACCGATTGGCATGCAGCAAAatgATGAACTCCGGTTAACATTCCCTGTAAGAGATGGTATTATACTACCGCCATTTAGATTAGAACATAATTTAGCAGTTAGTAACCATGTATTCCAATTAAAACCCACAGTCCACTCAACGTTGATTTGGAGGTCTGATCTGGAGTTACAACTAAAATGCTTCCATCATGAAGATCGTCAAATGAACACAAATTGGCCAGCAAGTGTTCAGGTGTCAGTCAATGCGACACCATTAGTAATAGATAGAGGGGAAAATAAAACATCACATAAGCCATTGTACCTGAAAGAAGTTTGCCAGCCAGGCAGAAACACCATCCAAATCACCGTCTCCGCCTGCTGTTGTtcacACTTATTCGTATTACAATTAGTTCATCGACCGAGCGTGCGAAGTGTACTGCAAGGTTTATTAAGAAAAAGGTTATTGACGGCAGATCATTGCAtcgctaaaataaaaatgaatttcaaCCAGTCACCTACTGCAGGAAACAACAATTCCAACACACCAAATGATAGGGACAGTGTAGAACAGACTGCGTTAAAAGTATCATTAAAATGTCCTATCACATTCAAGAAAATAACGTTACCTGCTCGAGGTCACGAGTGTAAACACATACAATGTTTTGACTTAGAATCATACTTACAACTAAACTGTGAACGAGGGTCATGGAGATGTCCTGTTTGCAACAAACCAGCACAATTAGAAGGCCTAGAAGTAGATCAATACATGTGGGGCATATTAAACACGCTGAATACCTCGGATGTAGATGAAGTCACCATCGATAGTGGAGCTAATTGGAAAGCAGCAAAGAGTCAAAACACAACAGGCATAAAGcaAGAGGATGACAGTGATAACAGTAGCAAGAGGAGCAAAGCAATGTCGCCTGGTTCGATGAATATGCCTACGATGAACAATTGGGACATGAACCAAGCACTTTCACCATATCTCCCACCTGACATGAACACCATCGCCAGCGGCTCTATGATCTCATCGTACAACCAAAGTGGACAAAACCGGAATTCCGGGTCAAATAGTCAAAATTACGACTTTGGAATGAACAACGGCCCTGGCAGCAATGAATTCGCGGGCAACGGTCCACTATCGCATCTCAACGATAGCGTGAATTCACTAGATCCACTAAACGCAATGGAAAAGAGCCTAAACGAACAGATGCCGCACACACCACACACGCCTCACACGCCGGGCTCGGCGCACACCccgggcggcggcggcggcgctcACACCCCCGGATCGTCGCACACGCCCGGCCCGCCCTCGGTCGGACACCACTCGCTCAACGAAGTCGACATCCCCGCTGACCTTAACTTCGATCCAGCGGCCGTCATCGACGGCGAGGGCACGGACAACCTCAATttgCTTCCCGAAACAAGTGTGGATCCAATGGAGTTGTTATCGTATTTGGACGCGCCGGCACTAGGAGAGCTATTAGCGACGCCgccgtcatcgtcatcgtcagcGGGGTCGCAACCTCCGCGCGCACCCTCATCGGACGACCTCCTGGCGCTGTTCGACTGA
- Protein Sequence
- MSKVLLYGTANSDSTAGYAGSTVTYAGAPAPSSGKRNPLQGTIGYRVNVPGSYGYAGGPGAMSGGGENAQFGATAAMVAAATTAAMQDSQPFSQMQSNMTMGNPQYGAMNGYGQQRSHNPGVTGMGMGGNGSMNGMNGMNGMAGMGQMGNAAMNGMNGMNPMAQMANMGMHANMMPGQMGPGQMSTSTKMGPSYQRRHTPYPSGTMLMGQRKSQYMGGQPNFGPNQYPAGYGGRPGFQSQYPPQQPLGPSGNFGAAMRGTIRQSTPPYTNQQQYFNGGVPNQFPQHQSGTAQYAGQYGGQFAQEVAMRTNMSYQHSPVPGNPTPPLTPSIQPYISPNGDVKPHFNELKPPIGMQQNDELRLTFPVRDGIILPPFRLEHNLAVSNHVFQLKPTVHSTLIWRSDLELQLKCFHHEDRQMNTNWPASVQVSVNATPLVIDRGENKTSHKPLYLKEVCQPGRNTIQITVSACCCSHLFVLQLVHRPSVRSVLQGLLRKRLLTADHCIAKIKMNFNQSPTAGNNNSNTPNDRDSVEQTALKVSLKCPITFKKITLPARGHECKHIQCFDLESYLQLNCERGSWRCPVCNKPAQLEGLEVDQYMWGILNTLNTSDVDEVTIDSGANWKAAKSQNTTGIKQEDDSDNSSKRSKAMSPGSMNMPTMNNWDMNQALSPYLPPDMNTIASGSMISSYNQSGQNRNSGSNSQNYDFGMNNGPGSNEFAGNGPLSHLNDSVNSLDPLNAMEKSLNEQMPHTPHTPHTPGSAHTPGGGGGAHTPGSSHTPGPPSVGHHSLNEVDIPADLNFDPAAVIDGEGTDNLNLLPETSVDPMELLSYLDAPALGELLATPPSSSSSAGSQPPRAPSSDDLLALFD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00357101;
- 90% Identity
- iTF_00860070; iTF_01363620; iTF_01362197; iTF_00112199; iTF_01359402; iTF_00341894; iTF_00786450; iTF_01093716; iTF_01539288; iTF_00727001; iTF_00968487; iTF_00064146; iTF_00237150;
- 80% Identity
- -