Slit001206.1
Basic Information
- Insect
- Spodoptera litura
- Gene Symbol
- Zmiz1
- Assembly
- GCA_002706865.1
- Location
- NC:9035597-9048017[-]
Transcription Factor Domain
- TF Family
- zf-MIZ
- Domain
- zf-MIZ domain
- PFAM
- PF02891
- TF Group
- Zinc-Coordinating Group
- Description
- This domain has SUMO (small ubiquitin-like modifier) ligase activity and is involved in DNA repair and chromosome organisation [1][2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.071 5.6e+02 0.2 0.9 4 24 384 404 381 409 0.88 2 2 8.1e-25 6.4e-21 73.7 7.5 1 50 468 517 468 517 0.98
Sequence Information
- Coding Sequence
- ATGAGCGGCGGGGGCGAGAACGCGCAGTTCGGCGCCACCGCCGCAATGGTCGCCGCGGCCACCACGGCCGCGATGCAGGACTCGCAGCCATTTTCGCAGATGCAAAGTAACATGACTATGGGAAATCCCCAATATGGTGCGATGAACGGCTATGGTCAACAACGCAGTCATAACCCAGCAATGACTGGGATGGGGATGGGTGGCAACAGCGGGATGAATGGGATGACCGGTATGGGGCAAATGGGAAATGCCGGTATGAACGGTATGAACCCAATGGCTCAGATGGCTAACATGGGTATGCACGCAAACATGATGCCATCGCAAATGGGGCCTGGACAAATGAGCAGCTCGGCAAAAATGGGGCCGGGATACCAGAGGCGGCATACGCCGTATCCGTCCGGTACTATGCTGATGGGCCAGCGGAAGACGCAATACATGAGTGGGCAGCCCAATTTTGGACCGACTCAGTACCCAGCGGGGTACGGTGGTAGGCCGGGCTTCCAGGGGCAATACCCGCCACAGCAACCGTTGGGACCTAGCGGAAATTTCGGTGCAGCAATGAGAGGAACGATGAGGCAGTCGACGCCGCCTTACTCGAATCAGGGGCAATATTTCAATGGTAACGTGCCAAACCAGTTCCCTCAGCACCAGAGCAGTAATGCGCAGTATGGTGGACAATACGGAGGTCAGTTCGCGCAGGAAGTTGCAATGCGCACTAACATGAGCTACCAGCACAGTCCAGTTCCTGGAAATCCGACGCCACCTCTAACGCCTGCCAGCAGTATGCCTCCATATATCAGCCCTAATGGCGATGTGAAACCTCATTTCAACGAGCTGAAACCTTCTATGGGCATGCAAAATGACGAGCTCCGGTTAACATTCCCCGTAAGAGATGGTATTATACTACCACCATTTAGATTAGAACATAATTTAGCTGTTAGCAatcatgtatttcaattaaagcCCACGGTCCATTCGACGTTAATATGgagATCGGACCTTGAGCTACAATTAAAATGCTTCCACCACGAAGATAGGCAGATGAACACAAACTGGCCAGCAAGTGTTCAAGTGTCGGTCAACGCGACTCCATTAGTAATAGATAGAGGAGAGAACAAAACATCACACAAACCATTGTACCTGAAAGAAGTGTGCCAGCCAGGCAGAAACACGATACAGATCACCGTTTCAGCCTGTTGCTGTTCGCATCTGTTTGTATTACAATTAGTTCACCGGCCGAGCGTACGAAGTGTGCTGCAAGGCCTATTAAGAAAACGCCTATTAACAGCAGACCACTGTATCGCGAAGATCAAAATGAACTTCAACCAAACGCCGACAAACGGTAGCAATGGATCTAACACTGCCAATGACAGGGACAGTGTTGAACAAATAGCTTTAAAAGTATCATTAAAATGTCCAATTACGTGTAAGAAGATCACCTTACCAGCACGTGGACACGAATGCAAACACATACAGTGTTTCGATCTGGAATCGTATTTACAACTAAACTGTGAACGGGGGTCATGGCGATGTCCAGTCTGCAATAAACCAGCACAATTAGAAGGGTTAGAAGTCGACCAATACATGTGGGGCATCCTAAACACGTTAAACAGTTCAGATGTAGATGAAGTGACAATCGACAGTGGCGCCAACTGGAAGGCtactaaaataactaacaatACTGGGATTAAGCAAGAAGAAGATAGCAGTGACGGCAGCTTAGGAAAGCGTAGTAAAGCAGTATCACCGGGTTCTATGAACATGCCAACAATGAACAACTGGGATATGAACCAGGCATTATCGCCATACCTTCCTCCTGACATGAACACAATAGCCAGTGGCTCTATGATCTCTTCCTATAACCAAAACGGTCAGAACAGAAATTCAAGTTCGAACAATCAGAATTATGATTTCGGTATGAACAATGGGCCTGGCAGTAACGAGTTTGCTGGAAACGGACCTCTGTCTCATCTGAATGAGAGTGTAAACTCATTAGATCCTCTGAACGCGATGGAGAAGAGTCTTAACGATCAGATGCCACATACACCACACACGCCGCACACGCCGGGCTCAGCGCACACACCGGGCGGTGGCGGCGCCCACACGCCGGGTTCCTCGCACACGCCGGGGCCGCCTTCCGTGGACCACCACTCCCTCACCGATGTCGACATTCCCGCCGACCTCAATTTTGATCCCGCCGCCGTCATAGATGGAGAAGGGACAGATAATCTCAATTTATTGCCGGAGACAAGTGTGGACCCGATGGAGCTATTGTCGTATTTAGACGCACCTGCACTAGGTGAACTACTAGCGACGCCGCCGTCGTCATCATCGTCGGCGGGCAGCCATCCACCGCGTGCGCCTTCCTCCGACGACCTCCTGGCGCTGTTTGAATGA
- Protein Sequence
- MSGGGENAQFGATAAMVAAATTAAMQDSQPFSQMQSNMTMGNPQYGAMNGYGQQRSHNPAMTGMGMGGNSGMNGMTGMGQMGNAGMNGMNPMAQMANMGMHANMMPSQMGPGQMSSSAKMGPGYQRRHTPYPSGTMLMGQRKTQYMSGQPNFGPTQYPAGYGGRPGFQGQYPPQQPLGPSGNFGAAMRGTMRQSTPPYSNQGQYFNGNVPNQFPQHQSSNAQYGGQYGGQFAQEVAMRTNMSYQHSPVPGNPTPPLTPASSMPPYISPNGDVKPHFNELKPSMGMQNDELRLTFPVRDGIILPPFRLEHNLAVSNHVFQLKPTVHSTLIWRSDLELQLKCFHHEDRQMNTNWPASVQVSVNATPLVIDRGENKTSHKPLYLKEVCQPGRNTIQITVSACCCSHLFVLQLVHRPSVRSVLQGLLRKRLLTADHCIAKIKMNFNQTPTNGSNGSNTANDRDSVEQIALKVSLKCPITCKKITLPARGHECKHIQCFDLESYLQLNCERGSWRCPVCNKPAQLEGLEVDQYMWGILNTLNSSDVDEVTIDSGANWKATKITNNTGIKQEEDSSDGSLGKRSKAVSPGSMNMPTMNNWDMNQALSPYLPPDMNTIASGSMISSYNQNGQNRNSSSNNQNYDFGMNNGPGSNEFAGNGPLSHLNESVNSLDPLNAMEKSLNDQMPHTPHTPHTPGSAHTPGGGGAHTPGSSHTPGPPSVDHHSLTDVDIPADLNFDPAAVIDGEGTDNLNLLPETSVDPMELLSYLDAPALGELLATPPSSSSSAGSHPPRAPSSDDLLALFE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00112199;
- 90% Identity
- iTF_01490669;
- 80% Identity
- -