Tvar016721.3


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Trilocha varians
Gene Symbol
Baz2b
Assembly
GCA_030269945.2
Location
AP028276.1:3171822-3220585[-]

Transcription Factor Domain

TF Family
MBD
Domain
MBD domain
PFAM
PF01429
TF Group
Unclassified Structure
Description
The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [2]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-specific affinity for DNA. In vitro foot-printing with MeCP2 showed the MBD can protect a 12 nucleotide region surrounding a methyl CpG pair [2]. MBDs are found in several Methyl-CpG binding proteins and also DNA demethylase [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 8e-11 2.1e-07 31.1 0.0 4 73 629 701 626 705 0.85

Sequence Information

Coding Sequence
ATGGACAAGGAGGGCGGCGATGGTGCCGAAGCGGCCGGGAAGACGCCTGACGGTTTGCTTGACGCCGCTGGACTCTTTGGCGCATACTGGGGCCGGGATGGCGCTGCGGGCGGCGCTGCGGCCCAGGCCCAGGCTCAGGCCCAGGCGGCCCTGTTCGGGTTCGGGTCGCGCTACCCGCCGCCGACGACGCTTGGAGTCGCCGCCAATCAGGCCGCCTCCTTAGGACTGCATCCTGCTGCAAGTGCAGCATGGTGGTCAATGGCTTCTCATTTAGCTGCCCAGGATTACCTCGCCCGGCTCCAAGCCTCGGGCCTGAACTTCCCACCGCTGGGCGACCCTTACGCTGCCCTGTCCGCGCTCTCCGGCAGCGGCATGAAACAAAACAAGCCTGTTAAACCGCCTGGGAGATCTGAAAGaTCAGGGCGGAGCAGTACATCGTCTAGTGCTTCCACTAAAGAGAAGAGTCCGTCAACTAATAACTCTTCACAACACAATATGGCTGATTGGAGTTCCAGTTACGGTTTCCCAAAGACCTCGTCGCCATCAACAATGCATTCTCAGTCGCTGTCCAGTCTCGCGTCTCTCAACAGTCTTGTATCAGCGCCGCATCAGCAGACCAAACCATCCAAGAGTAGTCAGCCTTCTTCTCAGTCCCGGAAACCATCATCATCGACGCCTTCTAAGAGCAAGGAGCGTGAGCTAGCGTTACTCCGCGGAGACCTGATGTTAGCGCAAGCGGCGGCCCACGGAGCTTACCACGCTGCCGTCGCCGCTGCTAAGGGGAAGaacaTGAATCCCTTATATCCTTTCGGTATGGGTTCCGAGAAGGACCGTCACGCCGGCTTCGATTCACTTACTGGATTACCGCACACTATACTAAGTGCTGCTTTGGAAGGAGGTGATCCGGCATCAGTGTTAGGAGGAGTGAGGCTACCTCCTGATACAGAAATCATCAAATACACATCGTCACTGGCAGGACCCAagGCGCCTCCCGGGTCCACGAATCGTGGTAGAAAGAAGACAATATCCCTCGACCCTCCGCAAGTCTCAGTACATCCATCATCAGGTGACCGGAGTACACCGTTACCGAGCAAAAGGCCAAAAGTGGAGGAGTACGGTTCGTCTCGCTCGTCAGTGGAAGTGATCCGGCTGCCGCACGGGAAGCAGGAGAGGGGAGCGCACAACTCGACACCGCCGCATAACTTCTCGGATTATGCGGGTATATCTCGCGAGTTGCTGCAGACTATAGCTAGTCAGAGCGGAGTGAGCCTGGCTGCGTTGGAGCGACAGCTGGCCGGGTCCGCCGCAACATCGGAATATAACGATACAAAGTCGGGAGTCGGTCTCAACAAGTCTGGAAGTGAAGACAGTCCTCTCGATCTTGGATTAAAAGCTTCCGACGAAGACAAGCCGTTGAATTTATCACTCAAACCTACACCGACGGCTTCCCATGCCTCGGACGCGTTATCTAGACTCACCTCACTCAGCAGCTCACTAAACGCATCTAATGACCGATCATCTCGTCGTAAACCAGGTGTGAAACCTCGAAGAGTAGCACCAGACTTCACGCAGGCTGATTCACCGCGACCTAAATCCAGCGGCAGCGAAGATAGCGAAtCGGTATCCGGTTGGCCGTCACGCGAAGGTAGACCAAGAAACCTGGGCCGCGGTGTCAGCAAACCCAAGAAAAACACCGTCGCATCCCTACTAGCGCAGAGCCGGGCTCTTGGACTAAGACCGGCGTTAGCCCAACAGCTGTTAGGAGAAACGGACTTGGAGAAGTTGAAAGCGTTGCTTGGCGAGACGGCGAGCACTGATTCGGAATGTCCTTCCGACAGTTGCCCTTCCGATTCCGACGCGAGCGACTCCAGTCGGAAACCGAAGGAATCTCTACTTAGACTGCCTTTAGCGCTCGGTTGGAAGCGAGTGACCGTGATCCGTGGATTGTCTCGTAACTGCAGTATTAAAGGCGACGTGAGCTACTCCCCGCCAGAACCACACGCCAACATCAAACTGAACAGCATGCAGGAATTACAGGCGTTCCTAGAATCGAACCCGAGCCCGCCTCTAACACTGGACAGTTTTAGCTTCAGTTCGCGCGCCATTTTGGGAGAGTACGTGCAACCGTGCGCAGATATAGCCGACCCGCTCGTGTTTAATGAAACGGAGATCACTAAGAGgttggaagAAGCAAAAGCATTGAACGCGTTAAGTAATAGACCTACCCCGCCGCCATTGGACCGTCGCATTGAACTAGCGCGTCTACAACAAGCCGCGAGAGATGccaggagagatcactctcttAGGTCCAAAGATCAGGCACGTCTAGTCAGAGAGATAGAAAAGACGGAAAAGGCTGAATTAGCTAAACGCGAGAAAGAGGCTAGGAGTCAGCAATTGTTAGAGCATATCAACAAGAATCGGACACAACTGACCATAGAGCCTGTTCCTTCCGTTTCGAAAGAATGGAAGCTTCCGGAAATATGTATGGGGCCCGCGAAAACGCATAAAGAACGCGCCATGCCCCCCATTAGTTTATCACTCATTCCTGTCGCCTGCCCCGCCCAATCGCCcataaagaatattctagaatGGAAAAGCGATCACGAAGAATATAACGCTTTAGATAAAATGAAAGATTTCGCAGAGAAAGCGGCTTTCGACCTACCCAAACGCAAAGACGAATACCTCAAAACTGACAAGAAAAAACCACCAGACAAAGGGAATAATCTAGAAAAACTGATCGAGTCGTACTCCAGGATAACAGAGTTTATAAATGGCTGCGATTGGTCGAAATTGCAAGCAGACAAAAAGGCCGAAAACGCCGCGGCACTAGAAAAGAAATACTTAGATGCGAAAAACGAGTTCATGTCACAGAATCTAAGTTTGATGCCCAAAGATGGCGGGAAATCAGTTTTAAAAGACGTCATAGATTTAAGCGAAGATGATGATGTCACTGAAGTTAAAAAAGTGCTGGGCCCACCCACGTTTAGTGTTGGGAAAGACTGcgctttatcgatatcgatacaCCAAGGATCGGCCAAAAAGAGGAAACAGGAAGAAATTGAGAAACAAAGAATCGAAGAGCAAGCTAAAAAACAACAGGAAAGAGAAATAAAAAGGCAACAAGCATTATTACTAAAAGAACagGAAAGAGAAAGAAGACGTCAACACACAACATTTATAAGACAACTAGACTCCAGAAAGAGATGGGAAGAGAGGGAGAGAAAGAAACACCAGAACCTACTTGACAGGCTGCTGGTTAAGGAGAAGAAGCTACAACAGAGAAGGAAGGAGATGGAGTTGCTCTCTGAATTGAGGCGACCCCAAGAAGACTCAACCCTCTCGGATCAGAAGCCCTTACCGACCCTCAATAGAATACAAGGGTTGAAACTACCCGGTCAAGCAATGGCGGACATATTACAAGTATACGAATTTATACATAACTTTGGGCAGACTTTAGGATTTGatttagaagcgATGCCCACACTGAGTACATTACAAACGGCTCTGTTGCCCAACTGTGGGACTGAGGCGGAGGAAGATCTCATACAAGTGCTGACTGCGCTGCTCATCACTGCTATTGAGGACCCAGGTATACCTCACCCTGGGCGCCACACCACGCTGCTCGGCCACGCCATCCGCATGGGAGACATCACTCCGCACAACCTGAGTGAGGTGCTGAGGATATACCTGTATGCCAACGCGACGGGGGAGGTCAAGGCTTTGACAGGTTTGACGGCGGAACGAGAGCGCGAGCGGCGAGTAGCTGATCATCATCAGAGCGCGGCCGAGATGGCACAGAGCAGCGCTACCACCAGGAACCTGGCTTACTACAAACATTTACACAACAATAATACTTATAAACTGTCTGAATCTCTCCGCGACAAGCCGTTTTTGTCTCTAAACGCGACATCCAAAGCCAAGATCCTGTCGTTCATCTGCAACGAGCTGCTTCAGAACAAAGCCGTGCTGAGACAGATCGACGGCTCGCTGGAACATCTCACGCAATTGAAGAAGGAACGATACTTACTCGATATGAAGATTAGAAAaGTCCGAGTGCTACATCAACGTAAAGTACGAGCTGAACAGTCAGAGAAACAGCAGGCATTAGCTCTCGAGAGGATGCAACGACTGGTGGAAGAGAGTTCTGTTAATATGAGGGCTTCACCCCATTTGAATGACGACGAACATTCGATCCAAGAGAAACAAGAAACTCCAAAGAAACAATCAAAGGAGCACTCGCCGAATCCGGAAGATAAAACGGATTCACCTTCACCGTACAAAGAACCTTCAAACGTCGATGAAAGCGACAAGGAATTATCGCCCTTAAAGGACTTATCTAACGGTATAAAAAGCAAGGAAATGTTGAACAACAACAAGGATGAGTGCTCTCCCGCCGACAACTCGAAGGTGGACAAGGATAGCGTCATGGGTGACGACGTGCTGAGCGACCTGGACACTGACTCCATACAGCACGATGAGGATGAAGACAAGAACCTTCCAGCGGAGGAGTTGTCCCGGAAACTGGAGAAGTTACTCCGTCAGTCCGAACAGCAGCTGCAGCAGGTCCAGGCCGGCTCGCACGCGCTCAGGGCCACTTGCTATGGACAAGACCGGTATTGGCGTCGCTACTGGTCCCTCGGTAAAGCGGGCGGTATATTCGTGGAAGCGATGGAGTCAGCTCAACCTGAAATACTACACTACCACGAAACTTTAGAGAATAACTTGACGAAAGACAACGATGTAGTTGTTAAGAAAGAAgtaaaagaagaagaacaacCAGCAGAAGAAGAGATAAAAGATGAATCTCAAATACAAGAGGAAGCTCTCAAGTCACAATTGGAACTGAAGAATATAAAATCAGAGTTGAACCTGAGTGACCACACGCAGATCATCAAGTACGAGCCGAATGTCAAACATGGCGCTTGTAAAGTGGAAGGCTCAATAAAAATGGAAGAGAAATTCATTCAGCACAAACAAAACAACGAAGCTCAAGATATGTTAGACATAGAAGACTCCATTCCCACAGCGTTCCTCGTACAAAAGCCAACACACAAACCGATGTACGCTGCACAAGCCGAGCCCGTCGACAAACCGCAAGAAATCGTCAAAATAGAAAACGTTAAAACCGAAGAAGAAACTAAAGATCAATTGGTTAATAATTTAGAAGAATTACGCAAGATGGCCGAAGCTGTATCTTCGCAATTAGACGCGGCTAAGGCAGAAGAAATCAAACAGGAAAACTTGAAATCAGAATCGGAAGAAATGGACGCCCAAGCGTATTTATACTCGAAAATCGTCGAAGGAAAATGGTTCTCAATTCTAAGGCACGAGAGctcatttttaaataacaaaacgtCGTATTGTGATAATGAACATACGTGTGCTGAAGTTGTCATGACTCAAGGTCACAAGTGGGACGTGTCTAATAACCTACACTTGCTCCATGACCCGAGTTTGTTCACATTGAACAGTATGGTGACCAGTGTGCAAGTGCCCGTTAACAATGTGTATGCGGACAGCAGCTTGACCATGTCCGGGCTGGATGAAGAGATGATGGAGGCCAGGATGAGTAGAGATGGAGTTGATGATGAAGATAATAAGGATCAGGAAAACGACCTAGAAAAAGAGCTACAAGCAGACAGCTTAAAAATAGACGCAGCAGCTCAAAAAGCTAAAGCAAACAGCCTCACCAGCTTAGGAATGTTGAACTTCAACGCATTATCGACATATGTCACATGTGACAGCCCTCCGCCCATACAAATGTCGGCTGATGAGTTAGATCAATTagaatattgtaaaatatacgGACTACCGAAGAAAGTTAATGGGAACTATGTTACTAAGGAATTGAGGCATGGTTGGTGGCGCATCACGGAGTCTGGTCAGCTGAAGTCTCTCCTGGATGCTCTCCATCCGCGAGGAGTACGAGAACGGGAGCTGCACGCTTCCTTCCTCACGCATCTACCCACCGTTAATAACAAGTTACACATAGAACTAGGCGACGCTCCGTTAGAGATGGACGTGGATGACGTAGACACCGGATATCCGGCCCCGGACTCGCCTACTTCCTTCTGTGAAGACACCGCAAGAAGAGTCGATATGAATCTATTACAAATGGTGGAACAGCTAGAAGAGCGTGTAGCCGCAGCATCCCTACAAACAAAGGGCTGGCGTCCCTCCCCCCTCTCCCTGCCGCCGCGCACCCCCCCGTCCGCCGTCACGAGCGCCGCGAGACACAAGCTGGCGGCATTAGAAGCGCACATCGAGAGGAGATACCTCAAACCGCCTTTGGTACAAAGGTATGCTAGCACAGCGGAAGCTAATTTAGGCGCCATGTTGTCCGGAGACCACGGAAACTCTTCAGCACCATCGCCACAAAACTCTGATGGAGGAAACGAAACTAAAGACAGTAAAGGCATAGCTCGTGGTTTAGCCACGTGGCGGGAAGCTGTAGCCCGCTGTAATACTTCAGCTCAGCTCGCCATGTTGTTACACGCGTTGGAATCTGCTGTGGCCTGGGATAAGAGCGTTATGAAGGCTAACTGTCAGTTTTGCCTGAACGGCGACAACGAAGACCAGCTGTTGTTGTGCGACGCTTGCGATAAAGGATACCACACGTACTGCTTCAAGCCGAGGATGGACAAGATACCTGAAGGGGACTGGTACTGCTGGGAGTGCGTGAACAAGGCGCGGGGCGAGCGCGTGTGCATCGTGTGCGGTAACGCCAACCCGGGCCGCGTCATACCGTGCGCGCTCTGTGTGCGTGCCTACCATCAGGACTGTCACTACCCGCCGCTACCCAAGaatCCACGTGGCAAATGGTACTGTAACAACTGCATTTCCCGCGCTCCGCCCAAGAAACCGCGCAACATGAAGAAACGAGACAACAAACATAAAGACAAGGATAAAGATAGCAGTCTGGATCTAGACCAGAGCATGGTGCCTAGTCCGGCACCATCCCACGCGTCCACATCAACAGTAGCCGAAGAGTGCAGCACCGCGCTCCCCACTCCGGAGAAGGAAGACAAGGTGGACGAAACACAGGAACCTGTTGAACATCCACCCCCTCCTCCGGAGTTGTCGGAGGAAGGTCCCCCGGACAAGCGGAGATGTATGCAGTACGTGGGCGGTAATGGCGCCGTGCACGATGACGAACAGAGCGTCGACAGTGAAGACAGAGACACAGAAAACGTGCCGGTACAACCTCGCGCAAAGAAAGATAAAAACTCTGCTAAGAAACAAGTAAAAGAACTACAATTTTGCAAGACCTTGCTTTGTGAGATGGAATGTCACGAGCACGCATGGCCGTTCCTCTTACCGGTCAACACTAAGCAGTTCCCGCAGTACAAGAAGGTGATCAAGTGTCCCATGGACCTCTCCACTATCAAGAAAAAACTACAGGACAGCACATACAAATGTAAAGAAGAGTTCGCGTCCGACGTCCGCCTGATGTTCAGTAACTGCGAGGTGTTCAACGAGGACTACAGCCCGGTGGGGCGCGCCGGACACAACATGAGACAGTTCTTCGAAGACAAGTGGACGCAGTGTTAG
Protein Sequence
MDKEGGDGAEAAGKTPDGLLDAAGLFGAYWGRDGAAGGAAAQAQAQAQAALFGFGSRYPPPTTLGVAANQAASLGLHPAASAAWWSMASHLAAQDYLARLQASGLNFPPLGDPYAALSALSGSGMKQNKPVKPPGRSERSGRSSTSSSASTKEKSPSTNNSSQHNMADWSSSYGFPKTSSPSTMHSQSLSSLASLNSLVSAPHQQTKPSKSSQPSSQSRKPSSSTPSKSKERELALLRGDLMLAQAAAHGAYHAAVAAAKGKNMNPLYPFGMGSEKDRHAGFDSLTGLPHTILSAALEGGDPASVLGGVRLPPDTEIIKYTSSLAGPKAPPGSTNRGRKKTISLDPPQVSVHPSSGDRSTPLPSKRPKVEEYGSSRSSVEVIRLPHGKQERGAHNSTPPHNFSDYAGISRELLQTIASQSGVSLAALERQLAGSAATSEYNDTKSGVGLNKSGSEDSPLDLGLKASDEDKPLNLSLKPTPTASHASDALSRLTSLSSSLNASNDRSSRRKPGVKPRRVAPDFTQADSPRPKSSGSEDSESVSGWPSREGRPRNLGRGVSKPKKNTVASLLAQSRALGLRPALAQQLLGETDLEKLKALLGETASTDSECPSDSCPSDSDASDSSRKPKESLLRLPLALGWKRVTVIRGLSRNCSIKGDVSYSPPEPHANIKLNSMQELQAFLESNPSPPLTLDSFSFSSRAILGEYVQPCADIADPLVFNETEITKRLEEAKALNALSNRPTPPPLDRRIELARLQQAARDARRDHSLRSKDQARLVREIEKTEKAELAKREKEARSQQLLEHINKNRTQLTIEPVPSVSKEWKLPEICMGPAKTHKERAMPPISLSLIPVACPAQSPIKNILEWKSDHEEYNALDKMKDFAEKAAFDLPKRKDEYLKTDKKKPPDKGNNLEKLIESYSRITEFINGCDWSKLQADKKAENAAALEKKYLDAKNEFMSQNLSLMPKDGGKSVLKDVIDLSEDDDVTEVKKVLGPPTFSVGKDCALSISIHQGSAKKRKQEEIEKQRIEEQAKKQQEREIKRQQALLLKEQERERRRQHTTFIRQLDSRKRWEERERKKHQNLLDRLLVKEKKLQQRRKEMELLSELRRPQEDSTLSDQKPLPTLNRIQGLKLPGQAMADILQVYEFIHNFGQTLGFDLEAMPTLSTLQTALLPNCGTEAEEDLIQVLTALLITAIEDPGIPHPGRHTTLLGHAIRMGDITPHNLSEVLRIYLYANATGEVKALTGLTAERERERRVADHHQSAAEMAQSSATTRNLAYYKHLHNNNTYKLSESLRDKPFLSLNATSKAKILSFICNELLQNKAVLRQIDGSLEHLTQLKKERYLLDMKIRKVRVLHQRKVRAEQSEKQQALALERMQRLVEESSVNMRASPHLNDDEHSIQEKQETPKKQSKEHSPNPEDKTDSPSPYKEPSNVDESDKELSPLKDLSNGIKSKEMLNNNKDECSPADNSKVDKDSVMGDDVLSDLDTDSIQHDEDEDKNLPAEELSRKLEKLLRQSEQQLQQVQAGSHALRATCYGQDRYWRRYWSLGKAGGIFVEAMESAQPEILHYHETLENNLTKDNDVVVKKEVKEEEQPAEEEIKDESQIQEEALKSQLELKNIKSELNLSDHTQIIKYEPNVKHGACKVEGSIKMEEKFIQHKQNNEAQDMLDIEDSIPTAFLVQKPTHKPMYAAQAEPVDKPQEIVKIENVKTEEETKDQLVNNLEELRKMAEAVSSQLDAAKAEEIKQENLKSESEEMDAQAYLYSKIVEGKWFSILRHESSFLNNKTSYCDNEHTCAEVVMTQGHKWDVSNNLHLLHDPSLFTLNSMVTSVQVPVNNVYADSSLTMSGLDEEMMEARMSRDGVDDEDNKDQENDLEKELQADSLKIDAAAQKAKANSLTSLGMLNFNALSTYVTCDSPPPIQMSADELDQLEYCKIYGLPKKVNGNYVTKELRHGWWRITESGQLKSLLDALHPRGVRERELHASFLTHLPTVNNKLHIELGDAPLEMDVDDVDTGYPAPDSPTSFCEDTARRVDMNLLQMVEQLEERVAAASLQTKGWRPSPLSLPPRTPPSAVTSAARHKLAALEAHIERRYLKPPLVQRYASTAEANLGAMLSGDHGNSSAPSPQNSDGGNETKDSKGIARGLATWREAVARCNTSAQLAMLLHALESAVAWDKSVMKANCQFCLNGDNEDQLLLCDACDKGYHTYCFKPRMDKIPEGDWYCWECVNKARGERVCIVCGNANPGRVIPCALCVRAYHQDCHYPPLPKNPRGKWYCNNCISRAPPKKPRNMKKRDNKHKDKDKDSSLDLDQSMVPSPAPSHASTSTVAEECSTALPTPEKEDKVDETQEPVEHPPPPPELSEEGPPDKRRCMQYVGGNGAVHDDEQSVDSEDRDTENVPVQPRAKKDKNSAKKQVKELQFCKTLLCEMECHEHAWPFLLPVNTKQFPQYKKVIKCPMDLSTIKKKLQDSTYKCKEEFASDVRLMFSNCEVFNEDYSPVGRAGHNMRQFFEDKWTQC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00236649; iTF_00235878;
90% Identity
-
80% Identity
-