Tnig015034.1
Basic Information
- Insect
- Trichopria nigra
- Gene Symbol
- dmd-4
- Assembly
- GCA_030522945.1
- Location
- JAPYZR010009161.1:3298-11046[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-25 1.2e-21 77.8 10.8 1 47 19 65 19 65 0.99 2 2 2.3 2.4e+04 -3.2 0.3 3 8 333 338 332 340 0.74
Sequence Information
- Coding Sequence
- ATGTTACgaggaaaatcgaaaaaatcggAAGAAGTAGAAGGAGACCGCAAGCAACGAAGACCTAAATGCGCAAGATGCAGAAATCATGGACTGATTTCGTGGCTACGTGGACACAAAAGAGAGTGTCGTTATCGGGAATGTTTTTGTCCAAAATGCTCCCTTATCGCCGAACGGCAAAGAGTTATGGCTGCACAGGTTGCATTGAAAAGGCAGCAAGCTGCTGAAGATGCAATTGCACTGAGCATGGCCAAGGTGACTACAGGCCAGAAATTAAATCGACTTCCGCCTGGAAAAATATTTGGGATGACAGTCACCGAGCCAGATACTACTGCAACGCCAAAACAAACCGACTCCAATTTTCCAGGTTCAAAAACGACATTTGAAGATTCGATTACGGACGAAACGAAAGGATCGATTGTAACTGGAAATTCTGAAAAAGTTTCGCAGTCCCCTACGGTCGGCGATGCCGAAACGACATCATGCCAAAAGGACATCGAAAAATCGCAACAATCTCCAAAATCTCCGTCGATCTCGCAAACATCCGTGGAGACTCTCGCGCGCTTATTTCCGGGTACGAAAATATCGGTTCTGCAATTGGTTCTTCAACGGTGTGGTCAAGATTTGTTGAAAGCCATCGAATATTTCGCACACAGTGAACATAACCCGTCTGCATCCCGCACTTCCGCTTTTCGGCCACCGCAAACCGGAAGACACGTAGACGCTTCGGGGACACTTCCGATTACGGAGCGTGCGGATGGCTTCTCGCTCTCACCGATATATTCCGCAAATCTGCACGGAGACGCCTGTTGCCTCTTCAATGTTGTCTCCGACTCGGTACCAGTGGGTGTCGAAGTTTGCACCGGCGGGTTTCAACTGGGCAAGCAATCGACTTACGAACGTGGCTTTTTTGAGACCGGAAATCAACAACATCAACAACTTCCGCAAAGGCCCATTTTTCATCTGCCACCATTCATCCCTGGAATTCCGTGCGTGCAACCTAATTGTTTGTTGTGCTATAAATTTACTTGA
- Protein Sequence
- MLRGKSKKSEEVEGDRKQRRPKCARCRNHGLISWLRGHKRECRYRECFCPKCSLIAERQRVMAAQVALKRQQAAEDAIALSMAKVTTGQKLNRLPPGKIFGMTVTEPDTTATPKQTDSNFPGSKTTFEDSITDETKGSIVTGNSEKVSQSPTVGDAETTSCQKDIEKSQQSPKSPSISQTSVETLARLFPGTKISVLQLVLQRCGQDLLKAIEYFAHSEHNPSASRTSAFRPPQTGRHVDASGTLPITERADGFSLSPIYSANLHGDACCLFNVVSDSVPVGVEVCTGGFQLGKQSTYERGFFETGNQQHQQLPQRPIFHLPPFIPGIPCVQPNCLLCYKFT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01488603;
- 90% Identity
- -
- 80% Identity
- -