Tnig000111.3
Basic Information
- Insect
- Trichopria nigra
- Gene Symbol
- ct
- Assembly
- GCA_030522945.1
- Location
- JAPYZR010000011.1:52936-64888[-]
Transcription Factor Domain
- TF Family
- CUT
- Domain
- Homeobox|CUT
- PFAM
- PF02376
- TF Group
- Helix-turn-helix
- Description
- The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.8e-27 2.3e-23 83.5 0.0 3 72 442 512 440 517 0.95 2 3 2.4e-32 3.2e-28 99.1 0.0 2 77 841 917 840 919 0.96 3 3 2.4e-29 3.2e-25 89.5 0.0 4 76 1078 1151 1076 1154 0.96
Sequence Information
- Coding Sequence
- ATGAAAATCAACCATAAGACATTATCGAAGGTCGTCGAACGCGAGGGTGTTAACTCCACCTGTCCTTTGCGCGCGAAATCCCTTAACGATACTCCGCCAAGCatTGCTCATTATGTGGAAGAGGTATCCAGGTTGCAAATGAGTTTTCAACGCCTTCAAGAAACGAGTGCCCAGGCGACGGCACGCCTGGAGGAGGAGCTAGAATCGCGTCTGCAGCACATCAACCGACTCGAGAGCAAACTCGAAAGGCAGAAGGATTACGATGACTTAAAACGCGAGATCACCATCCTGAGGTCCATCGACCTATCTCAAATTCCAACGGGTGAGCCTGGCAAAAGCCTTGAACACCTGCTTATAGAACGTTCTAAGGCATTTCAACAAGCTGAGACGCTGAAACCTCCGAGCACTCCCGATGCACTCGGAGGACTATCGTCACCCCTGCAACGGGCCGCGACCGCTTCGCCCCACGGGGCAGTGAATGCACCGTGCTCCCTCGTATCCTCCCAGCAAGCACTTCCAACACGTTCCACTCCAACACCGTCCTCCGCAACATCGACGACTTCAAGTCTCCTTTTTCCACCGCCTCTTCAAAACGTTGAGACCTTCGGTTCCTTCCTTGGTGAAGAAATCGTCGCTAACTGGAGGCGGTCTTTGGAGAGATCGATCATGagtcagcagcagcagcaacagcagcagcagcagcagcaacaactaCCATCGTCCCAAGTTTCCCATCAACAGCAACAACAAATACAAACGCCATCCGTTGGCCTTCATCCTCCAACAACGCCCATTAGTCTAAATCATCTTCCATCACCAACAGATCCAATTTCATCGTCGAACACACCGGCCAAGTCGAGCACACCGCTGGGAGGTGCTGGGTGTCTGGATTCCACGGAAAAAGCATCGACGCCTATTCCTGGACACGAAACTCCAGCTCCGCCAACTCCTTCATCTACAACGGCTCTCATCTCACCGCCTACCTTACAACCACCGACATCGCTCGCAGATTCTACTTCCATTAATGGTGGCATAACTAGCGTATCAACGGCTCCACCGCCTAAAAGCCCAGCTGAAGAATCCTGTCATAATAACAACAACAGCCATCATttagcaaataataatattggtaGTCTTAGTGCACTGGACTCTCTCAAAAGTCCTTTCCGTTTCGACGATCGTACGCACCCTTTTCGGTTTGGTGACGAATTTGGAGCCGCTGGTATGGCTGGAAGACTCGGCGAATCCCTCATTCCAAAAGGCGATCCCATGGAGGCCCGATTACAAGAGATGCTACGGTATAATATGGACAAATACGCAACGCAAAATCTCGATACTTTACATATCGCTAGAAGAGTTCGTGAATTACTGTCTATACATAACATTGGCCAGAGACTCTTCGCTAAGTACGTTCTTGGATTAAGTCAAGGCACCGTAAGTGAACTTCTGAGCAAACCAAAACCCTGGGACAAGCTGACGGAAAAGGGACGCGATAGCTATCGGAAAATGCACGGTTGGGCGTGTGATGACAACGCAGTGCTGCTGCTGAAATCCCTCATCCCCAAGAAAGAGTATGTTTCAGGCAAAGAGCAGGGAATGCCGCCATTCGCTCGCGGTCCCCAGGAGGGAGGACCAACCGATATGAGCGACGAGCGAATCGTTCATATGCTCTCCGAATCCGGGCATATTCAATTAAATAGGAGCGAACACGAAATGTCGAATGACGCGGACAGCAAAAGTCCAAATCGCGTTGGTGCTTGCCCGAGTCCATTCAGCAAAGATCGCCTTGACAGCCAGAATCGACGATTGAAGAAGTATGAGAACGATGACATTCCACAGGAAAAGGTTATGAGGATTTATCAGGAGGAGCTTGCCAAACTTATGGGACGCCGGCCGGATGACATGCGTGGACCACGAGAATTTCCTTCCAGTGCGATGTTTCCACACTTTTTCAGTGGCCAAGGCCTGGGTGTAGAGCGTACTCAGGAGGAAATTCGCCTCGCCCTGGACGCTTATCATCGAGAATTGCAGAAGTTGAACGCACCGGGACTTCCATATCCTCCGCAGATCTCGGGGCTTTTAGCGCTTCAGCAACATGCGCTCCAGCAGCAACATTTGGCAACCAATGGCGGTGGAGCGGCTCAAGATCTCAGCCTAGGCAATATTCTCCGAAACAAAATGATCAACGGCGTTTCAGAAGAGGAGAAGGAGAAGATGGAAGAAGCCATGAGACACGCTGGAAGCGCATTCTCGTTGGTCAAGCCGAAACAGGAAGCGAGTGGTCCACAATCAACGCCCGGTGGTTCAAGCGCGAGTTCACCGTTGGGCAACTCGATTCTTCCTCCGGCGATGACACCGAGCGAGGAGTTCTCCGGTGCAACCGCGGCGAGTCCATTGCAGAGGATGGCGTCCATTACGAATAGTTTGATCAGCCAACCGTCCACGCCCACTCATCACTCTTCTAATCAGAGGCCACTGAAAGCTGTTCTTCCGCCAATCACGCAGCAGCAATTCGACGTGTACAACAATCTCAATACCGAAGATATTGTGAAGAGGGTAAAAGAACAGCTTTCACAATATTCGATCTCGCAGCGTCTATTCGGAGAGTCTGTCTTAGGCTTGTCACAGGGTTCCGTGTCTGACCTTCTGGCGCGACCTAAGCCGTGGCATATGCTGACGCAAAAGGGCAGAGAACCGTTCATACGAATGAAAATGTTCCTGGAAGATGACAATGCCGTGCACAAACTCGTTGCCAGCCAGTATAAAATCGCACCTGAGAAGCTGATGAGGACCGGCGGCTACGGCGGCCTGCCTCGTAAGTTTAACTCAGcGTGCGGAACTCCGATGAAACCGATGCCACCAACGAAGCTTGTCCAGGAACAACTGCAGAATGCCGCAAAAGCTCAGGCCGCGGCACAAGCGGCAGCGCAAGCAGCAGCACAACACCAGCAGGAGAGCCAAATGCAACTGGGACCGTCGCAGCAGAGTCCTCAGCTTTCGTCGCATCCGCATTCGCAACCGCCGCCACCGATGATGCTGACACCGACAGGTTCGATTCTCCCGCACACGCAATTGGCGATGCAGGAACTTCAGAAGAAACAACAGCAACatcaacaacagcagcagcaaatGAACTTGCATTCACCTCATCATCAAATGGCACCGTCTCCATTACTCGCATTACAGCCTCATCATTCGCAGAGCGTTTACGAAGTGGCCGCGCTCACCCCAGAGCTAGATACGCAGACTATCAcgacgaaaataaaagaagctTTGTTGGCGAATAATATCGGTCAAAAGATTTTTGGCGAGGCGGTACTCGGCCTGTCGCAAGGTTCGGTAAGTGAACTTTTGAGTAAACCGAAACCGTGGCACATGCTAAGCATCAAAGGTCGGGAGCCTTTCGTTCGAATGAATTTTTGGCTCGCGAATCCGCTCAACATAGACAAACTACAAGCGCTCAAAAACGAACGACGAGAAGCTAACAAACGGCGTCGAAGCAGCGGACCCGGTCACGACAACAGTTCCGATACATCGAGTAACGACACCGCCGAGTTTTACCATGCCGCATCGCCCGGACCGGGACCAACATCCGCTAAAAAGCAAAGAGTCTTGTTCAGCGAGGAACAAAAAGAAGCGCTGCGATTGGCCTTCGCCCTCGATCCCTATCCCAACGTCGCCACCATTGAATTTCTCGCTACCGAGTTGGCCCTCTCTTCGCGAACAATAACCAACTGGTTCCACAATCATCGCATGAGGTTGAAGCAACAGACACCCCACGGCCAACCCGAGCCTCAGTCGCCGCGGGAACCAGCTCAGCCCTTCGACCCCGTTCAATTTCGACTGCTCTTGAACCAAAGACTGCTAGATATTCAGAAGGAGAGACTAGGCTTAAGCAACGTTCAGCTCGCGTATCCTCCTTATTTTAATCCGAATATTGCCGCTCTCGTCGGCAATGCCCTTAAGGAGCAGTGTTCCGGCCTTGATTTGTCGATGGGCTCGCTGAAGCGAGAGCCTAATCAAGAGTTCGAAGACGACGACGTCGAAGATGCCATGAGTAATCTCGGCAGCGAAGACTCCGAGGGATCCGCCGGTAGCATAAAGCGCGAACCTGCGGAGGCACCGGCCCCGACAGCCGTCAGGTCGAACCGACGGAAACCGGCGGCGCCCCAGTGGGTGAATCCCGAATGGCAGGAGGCCCCGCGAACCGGCGACGAGGTCATCATCAACGGCGTCTGCGTCATGCAGACCGATGACTACGGCGTCAAGCGGGAATCCGAAGAGACCGTCCGGGTGGAGCCGACGCCGGTTCAGGACAGATACGAGGAAGATGCCCAGAGCGACATGTCCTCGGTATCCGGAAACAATGGCCCGGACCACGACAGTCCGGTACCGAGCCCGAAGTCGGCGCAGAACAGTCCGGCGACCTCGCCGAGGCCTTCGTCAACTTCGCTCGCTCACCCAGCGACGGAGGAGAGTCCGAAAGAAGTCGTGAAACACGAACCGGAAGAGCCGTGGGACTACTAG
- Protein Sequence
- MKINHKTLSKVVEREGVNSTCPLRAKSLNDTPPSIAHYVEEVSRLQMSFQRLQETSAQATARLEEELESRLQHINRLESKLERQKDYDDLKREITILRSIDLSQIPTGEPGKSLEHLLIERSKAFQQAETLKPPSTPDALGGLSSPLQRAATASPHGAVNAPCSLVSSQQALPTRSTPTPSSATSTTSSLLFPPPLQNVETFGSFLGEEIVANWRRSLERSIMSQQQQQQQQQQQQQLPSSQVSHQQQQQIQTPSVGLHPPTTPISLNHLPSPTDPISSSNTPAKSSTPLGGAGCLDSTEKASTPIPGHETPAPPTPSSTTALISPPTLQPPTSLADSTSINGGITSVSTAPPPKSPAEESCHNNNNSHHLANNNIGSLSALDSLKSPFRFDDRTHPFRFGDEFGAAGMAGRLGESLIPKGDPMEARLQEMLRYNMDKYATQNLDTLHIARRVRELLSIHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHGWACDDNAVLLLKSLIPKKEYVSGKEQGMPPFARGPQEGGPTDMSDERIVHMLSESGHIQLNRSEHEMSNDADSKSPNRVGACPSPFSKDRLDSQNRRLKKYENDDIPQEKVMRIYQEELAKLMGRRPDDMRGPREFPSSAMFPHFFSGQGLGVERTQEEIRLALDAYHRELQKLNAPGLPYPPQISGLLALQQHALQQQHLATNGGGAAQDLSLGNILRNKMINGVSEEEKEKMEEAMRHAGSAFSLVKPKQEASGPQSTPGGSSASSPLGNSILPPAMTPSEEFSGATAASPLQRMASITNSLISQPSTPTHHSSNQRPLKAVLPPITQQQFDVYNNLNTEDIVKRVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGLPRKFNSACGTPMKPMPPTKLVQEQLQNAAKAQAAAQAAAQAAAQHQQESQMQLGPSQQSPQLSSHPHSQPPPPMMLTPTGSILPHTQLAMQELQKKQQQHQQQQQQMNLHSPHHQMAPSPLLALQPHHSQSVYEVAALTPELDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFVRMNFWLANPLNIDKLQALKNERREANKRRRSSGPGHDNSSDTSSNDTAEFYHAASPGPGPTSAKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLATELALSSRTITNWFHNHRMRLKQQTPHGQPEPQSPREPAQPFDPVQFRLLLNQRLLDIQKERLGLSNVQLAYPPYFNPNIAALVGNALKEQCSGLDLSMGSLKREPNQEFEDDDVEDAMSNLGSEDSEGSAGSIKREPAEAPAPTAVRSNRRKPAAPQWVNPEWQEAPRTGDEVIINGVCVMQTDDYGVKRESEETVRVEPTPVQDRYEEDAQSDMSSVSGNNGPDHDSPVPSPKSAQNSPATSPRPSSTSLAHPATEESPKEVVKHEPEEPWDY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01394913;
- 90% Identity
- iTF_01488321;
- 80% Identity
- iTF_01489272;