Basic Information

Gene Symbol
ct
Assembly
GCA_030407085.1
Location
CM059585.1:117508853-117521479[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 3e-27 4.8e-23 83.3 0.0 3 72 620 690 618 695 0.95
2 3 3.3e-32 5.2e-28 99.2 0.0 2 77 1020 1096 1019 1098 0.96
3 3 8.8e-31 1.4e-26 94.6 0.0 3 76 1253 1327 1251 1330 0.96

Sequence Information

Coding Sequence
ATGCCCGCTAGCTGTGTATCCTGTAAGGAGGACGGTTTGGAGGGGATGAGATGCGAGCAGTGCACGCTACCTCCTTCCCTCCTCTTACGATATGCCCGTCTcactctttctctttctctcttagTCCCTCGCGACCCATCGCCTCACGTAGTTCCACACCCTCGCATCACGAGCCCCTTTCTCTCTTGGTATATTTCCCCTTCAACCCCTTTTGTTGCTTCGGTTGCCCCCCTCCTACACCCGCAGCTCTGGCCGTCATACCACCCTCAGGCCGCTCTCTTCCCTCGTCTCTTCTTCCATAGGCATCCTCTTGCCGCCGAACGTATCCAGTCCTTGCATATTAATCCTACCCATAATTCCCACTTCCCAGTTTGGGCAACCCTTCGTTCGTTCTGTAGAATAAGAGAGAAAGAGTTAGGAGCAGAGAGGGACCGAGACGCGGGCAGGCTAAACCACCTATCGATTGGGCTTTCTTTCCGAGCTGGGCTTTTAATTGGCATACTCCTGCGGCAAGAAGAGCGAGAGAGAAAGGGAGATGTACCAAACGAAAATAAGAGAAAAAGTGGAGAAGGCGGGAAAGAAAGAGGAAGAGAAGAGCCGATGATGCCTAGGGGCGATTCGCGGACCGAAAGGGTTGTTGCTTCCATGatCGCTCACTATGTGGAAGAGGTATCCAGGTTGCAAATGAGTTTACAACGCCTTCAAGAAACGAGTGCTCAGGCTACGGCACGCCTGGAGGAGGAGCTAGAATCGCGTTTACAGCACATCAACCGACTTGAGAGTAAGCTCGAAAGGCAGAAGGATTATGATGATTTAAAACGCGAGATCACCATCCTGAGGTCCATCGACCTATCGCAAATTCCAACCGGCGAGCCTGGTAAAAGCCTCGAACACCTGCTTATAGAACGTTCTAAAGCATTTCAACAAGCGGAGACGTTGAAACCTCCAAGTACTCCTGATGCAATCGGAGGACTATCGTCACCCCTGCAACGAGCCGCGACCGCTTCGCCCCACGGGGCAGTGAATGCACCGTGCTCCCTCGTATCCTCCCAGCAAGCACTTCCAACACGTTCCACTCCAACACCTTCCTCCGCTACATCGACGACTTCAAGTCTCCTTTTTCCACCGCCTCTTCAAAACGTTGAAACCTTCGGTTCCTTCCTTGGCGAAGAAATCGTCGCTAACTGGAGGCGGTCTTTGGAGAGATCGATCATGAGtcagcagcagcaacagcagcagcaacaactaCCATCATCCCAAGTTTCCcatcaacaacaacaacaaatacAAACGCCATCTATTGGCCTTCATCCTTCAACAACGCCTATTAGTCTAAATCATCTTCCATCGCCAACAGATCCAATTTCGTCATCGAATACACCAGCCAAGTCGATTACACCTCTAGGAAGTGCAGGATGTTTAGATTCTACGGAAAAAGCATCGACGCCTATTCCTGGCCACGAAACTCCAGCGCCACCTACACCTTCATCCACGACGGCTCTCATCTCGCCGCCCAGTCTACAGCCACCTACTTCATTAGCAGATTCTACTTCCATTAACGGCGGTATGACTAGTCTGTCAGCGGCACCTCCGCCAAAAAGTCCGGCCGAAGAATCTTGTCACAACAATAATAACAGTCATCATTTAGCAAATAATAACATCGGTGGTCTTAGTGCCCTGGAATCTCTGAAAAGTCCTTTCCGATTTGATGATCGTACGCATCCTTTTCGATTTGGTGATGAATTTGGTGCAGCTGGTATGGCTGGAAGACTCGGCGAATCTCTCATTCCGAAAGGAGATCCCATGGAGGCCCGATTACAAGAGATGCTACGTTATAATATGGATAAATATGCCACGCAAAACCTCGATACTTTACATATCGCCAGAAGGGTTCGTGAATTACTCTCTATTCATAACATCGGGCAGAGACTCTTTGCGAAGTACGTTCTTGGACTAAGTCAGGGCACCGTCAGTGAACTTCTAAGCAAACCAAAACCATGGGACAAGCTGACAGAAAAGGGGCGTGATAGCTATCGGAAAATGCATGGTTGGGCATGTGATGACAACGCAGTGCTGCTGCTGAAATCCCTCATCCCCAAGAAAGAGTATGTTTCAGGCAAGGAACAGGGAATGCCACCATTCGCTCGCGGTCCTCAAGACGGAGGTCCGACTGACATGAGTGATGAGCGAATCGCACATATGCTCTCCGAATCTGGACATATGCAGTTAAATAGGAGCGAACACGAGATGTCGAATGACGCGGACAGCAAGAGTCCGAATCGTCTCGGTGGCTGTCCGAGTCCATTTAGTAAGGAACGTCTCGATAGTCAAAATCGACGATTAAAGAAGTACGAGAACGATGACATTCCACAGGAAAAAGTTATGAGGATTTACCAAGAGGAGCTTGCCAAACTTATGGGACGGCGGCCTGAAGATATGCGAGGACCTCGTGAATTTCCTTCCAGTGCGATGTTTCCACACTTTTTCAGTGGCCAAGGTATGCAAGGAGTTGAGCGTACCCAGGAGGAAATTCGCCTTGCTTTAGACGCTTATCATAGAGAACTGCAGAAATTGAACGCGCCAGGCCTTCCATATCCGCCGCAAATCTCTGGGCTTTTAGCGCTTCAACAGCATGCAATCCAGCAACATCATTTAGCAACCAATGGCGGTGGAGCTGCTCAAGATCTTAGCCTCGGCAATATTCTCCGAAATAAAATGATCAATGGCGTTTCTGaagaggaaaaggaaaaaatggaagaagCCATGAGACATGCTGGAAGCGCATTCTCGTTGGTGAAGCCAAAGCAAGAAGCAAGTGGACCACAGTCAACGCCTGGTGGTTCAAGTGCGAGTTCACCGTTAGGAAACTCTATTCTTCCCCCGGCGATGACACCGAGTGAGGAGTTCTCCGGTGCGACCGCCGCCAGTCCGTTACAGAGGATGGCGTCCATAACAAACAGTTTGATCAGCCAACCGTCCACGCCTACTCATCACTCATCTAATCAGCGGCCACTAAAAGCTGTTCTTCCACCAATTACACAGCAGCAATTCGACATGTACAACAATCTTAATACTGAAGACATTGTAAAGAGGGTAAAAGAACAGCTTTCACAATATTCGATCTCGCAGCGTCTATTCGGAGAGTCTGTCTTAGGCTTGTCACAGGGCTCCGTATCTGACCTTCTGGCGCGACCGAAACCTTGGCATATGCTCACGCAAAAAGGCAGGGAACCATTCATTCGTATGAAAATGTTCCTGGAGGACGACAACGCCGTCCATAAACTCGTTGCAAGCCAATACAAAATCGCACCAGAGAAATTGATGAGGACCGGCGGCTACGGCGGCCTGCCTCGTAAGTTTAACTCAGCATGTGGAACTCCGATGAAACCGATGCCTCCAACGAAGCTTGTCCAAGAGCAACTGCAGAACGCCGCAAAGGCTCAGGCAGCAGCCCAAGCGGCAGCACAAGCAGCAGCACAACATCAACAAGAGAGCCAAATGCAACTGGGTCCTTCGCAACAGAGCCCGCAGCTGTCTGGACATCCGCATTCGCAGCCACCACCACCAATGATGCTGACACCAACCGGTTCAATTCTCCCACATTCACAGCTGGCGATGCAAGAACTTCAAAAGAAACAGCAACATCAACAGCAACaaatgaatctacattcacctCACCATCAAATGGCACCATCGCCATTGCGCACACTGCAACCACATGTTTCACAGAGCATATACGAAAGGGCTGCTCTCACGCAAGACCTTGACACCCAAACTATTACGACAAAAATTAAAGAGGCTttattagcaaataatattGGCCAAAAGATTTTTGGTGAGGCGGTACTCGGGTTATCGCAAGGTTCAGTAAGTGAACTTCTTAGTAAACCTAAGCCGTGGCATATGCTCAGCATCAAAGGTCGAGAACCTTTTATTCGAATGCAAATCTGGCTCTCGGATCCACATAACATAGATAAACTTCAGGCCCTCAAAAATGAGCGACGAGAAGCTAATAAACGGCGTCGAAGTAGCGGACCAGGTCACGACAATAGTTCCGATACATCGAGCAATGATACTGCTGAATTCTACCACGCCGCATCACCTGGACCTGGACCAAACTCAGCTAAAAAGCAAAGAGTCTTGTTCAGTGAAGAACAAAAAGAAGCACTACGGTTGGCTTTCGCACTTGATCCTTATCCGAATGTAGCTACCATAGAATTTCTTGCAAGCGAGTTGGCTCTAGCTTCACGCACAATAACGAACTGGTTTCACAATCATCGCATGAGGCTCAAACAGCAGCCACCTCATGGCCAGCCAGAGCCACAGTCTCCGCGAGAACCAGCTCAACCTTTCGACCCTGTTCAATTCCGACTGCTCTTGAACCAAAGACTGCTAGATATTCAGAAGGAGAGACTAGGGTTGGGCAACGTCCCACTTACTTACCCTCCTTATTTCAATCCAAATCTTGCTGCTCTCGTCGGCAATGCCCTTAAGGAGCAATATTCTGGTCTTGACTTGTCGATGGGCTCTCTAAAGCGAGAGCCTAACCAAGAATTTGAAGATGAGGATGTCGAAGATGCCATGAGCAATCTCGGCAGCGAAGATTCCGAAGGATCCGCTGGTAGTATCAAGCGCGAGCCCACGGAAGCACCGGCTCCGGCTGCTGCTGGAAGATCCAATCGGCGAAAACCAGCGGCACCACAGTGGGTGAATCCCGAATGGCAAGATGCTCCTCGAACTGGCGATGAGGTGATTATCAACGGCGTTTGCGTCATGCAAACTGACGATTACGGCGTTAAGCGAGAATCTGAGGAGACTGTAAGGGTGGAACCAACGCCAGTTCAGGATAGATACGAGGAAGACGCTCAGAGTGACATGTCCTCGGTTTCCGGAAATAATGGACCGGAGCACGACAGTCCGGTACCGAGTCCGAAATCGACGCAGAATAGTCCGGCGACTTCACCGAGGCCTTCGTCGGTCTCGCTCGCTCATCCAACGACAGAGGAAAGTCCGAAAGAAGTCGTTAAACACGAGCCAGAAGAGGCGTGGGACTACTAG
Protein Sequence
MPASCVSCKEDGLEGMRCEQCTLPPSLLLRYARLTLSLSLLVPRDPSPHVVPHPRITSPFLSWYISPSTPFVASVAPLLHPQLWPSYHPQAALFPRLFFHRHPLAAERIQSLHINPTHNSHFPVWATLRSFCRIREKELGAERDRDAGRLNHLSIGLSFRAGLLIGILLRQEERERKGDVPNENKRKSGEGGKERGREEPMMPRGDSRTERVVASMIAHYVEEVSRLQMSLQRLQETSAQATARLEEELESRLQHINRLESKLERQKDYDDLKREITILRSIDLSQIPTGEPGKSLEHLLIERSKAFQQAETLKPPSTPDAIGGLSSPLQRAATASPHGAVNAPCSLVSSQQALPTRSTPTPSSATSTTSSLLFPPPLQNVETFGSFLGEEIVANWRRSLERSIMSQQQQQQQQQLPSSQVSHQQQQQIQTPSIGLHPSTTPISLNHLPSPTDPISSSNTPAKSITPLGSAGCLDSTEKASTPIPGHETPAPPTPSSTTALISPPSLQPPTSLADSTSINGGMTSLSAAPPPKSPAEESCHNNNNSHHLANNNIGGLSALESLKSPFRFDDRTHPFRFGDEFGAAGMAGRLGESLIPKGDPMEARLQEMLRYNMDKYATQNLDTLHIARRVRELLSIHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHGWACDDNAVLLLKSLIPKKEYVSGKEQGMPPFARGPQDGGPTDMSDERIAHMLSESGHMQLNRSEHEMSNDADSKSPNRLGGCPSPFSKERLDSQNRRLKKYENDDIPQEKVMRIYQEELAKLMGRRPEDMRGPREFPSSAMFPHFFSGQGMQGVERTQEEIRLALDAYHRELQKLNAPGLPYPPQISGLLALQQHAIQQHHLATNGGGAAQDLSLGNILRNKMINGVSEEEKEKMEEAMRHAGSAFSLVKPKQEASGPQSTPGGSSASSPLGNSILPPAMTPSEEFSGATAASPLQRMASITNSLISQPSTPTHHSSNQRPLKAVLPPITQQQFDMYNNLNTEDIVKRVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGLPRKFNSACGTPMKPMPPTKLVQEQLQNAAKAQAAAQAAAQAAAQHQQESQMQLGPSQQSPQLSGHPHSQPPPPMMLTPTGSILPHSQLAMQELQKKQQHQQQQMNLHSPHHQMAPSPLRTLQPHVSQSIYERAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQIWLSDPHNIDKLQALKNERREANKRRRSSGPGHDNSSDTSSNDTAEFYHAASPGPGPNSAKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLASELALASRTITNWFHNHRMRLKQQPPHGQPEPQSPREPAQPFDPVQFRLLLNQRLLDIQKERLGLGNVPLTYPPYFNPNLAALVGNALKEQYSGLDLSMGSLKREPNQEFEDEDVEDAMSNLGSEDSEGSAGSIKREPTEAPAPAAAGRSNRRKPAAPQWVNPEWQDAPRTGDEVIINGVCVMQTDDYGVKRESEETVRVEPTPVQDRYEEDAQSDMSSVSGNNGPEHDSPVPSPKSTQNSPATSPRPSSVSLAHPTTEESPKEVVKHEPEEAWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01394913;
80% Identity
iTF_01488435;