Tnig008189.1
Basic Information
- Insect
- Trichopria nigra
- Gene Symbol
- Rel
- Assembly
- GCA_030522945.1
- Location
- JAPYZR010003773.1:5128-11475[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.6e-41 2e-37 130.3 0.7 1 168 87 278 87 279 0.91 2 2 2 1.5e+04 -2.7 0.6 108 127 812 831 770 859 0.60
Sequence Information
- Coding Sequence
- atGCCTGACGTctacgaaaatataaatgtttatcaaAGCTACAATCTGCGTACAGCTTATgatcaagataatttttatacatttccaCATGATCAGCATATGATGAATAGCAGCGACAGCTACAGTCCATATTCAATGGATTCGCCGCATACAATGGAAGCGGTATCACCAGGATCTTTCACTGGTTCACTTTCgcaaactgaaaatattttacacgatCTTCAAAATGCTGAATaTCAAGACCTTGGCTCGCCGCAGTTACAAATTGTTATACAGCCTGTTGATAAATTTAGATTTCGCTACAAATCGGAAATGATGGGAACACATGGAAGTCTTTTGGGTGAAAAGGCTGATAGAAGTACTAGAAAAGAAGTTCCGACTGTGAAgCTTTTTAATGCTCCGCTAATGACCAAAGCAATAATTCGTTGTACATTAGTGACATCGGATGAAGAGCGTAGAATGCCACATGCTCATCATTTAGTCATGCGGCATGGAAACGATGATGAAGATGACCCTCACGAAATCGAAGTTTCAGAGGAAAATAATTATACTGCAGCtttttgcgGTATGGGTATTATACATAccgctaaaaaaaatatcaaagatgAGTTAGTCAGAAAAAGGAAACGGGAGGTTATTGAAGAAAAAGTCAGACAGAAGAAAGGTTCTACATTAACGGTTCGAGAAGAATCAGAGATTAAAATGGAGGTGGAAGCTGCACAAAAGTGGATGAATTTGAATAGTGTAGCACTCTGTTTTCAAGCTTTTGCATTTGACAATAATAGTATTCTAAACCCAATTACTAAGCCGATTTACTCACATCCTATTAACAATTTAAaAAGTGCATTAACTGGGGAATTGAAAATCTgtcgaattgataaaaataccaGTTCTTGCGAAGGTTCAGAGGAAATATGGATCTTGGTGGAAAAAGTTGGCAAAAaaaacataaaaattaaaatttacgagGTAGATGATTATGGTAATGAAACATGGAGCGATTATGGAAGATTTTCCGAACTAGATGTACATCACCAGTATGCCATAGTTTTTCGGACACCACCATATAAAGATAGAAATATCACAAGCCCCAAagaagtttttataaaattggaacGTCCAACAGATGGAGAATGTTCCAACAGTATGCGATTCACGTACAAAGAGTCTAATAAAACACTAAGTAGGAAACGAGCCCGAGTGACGCCATCGTCGGGAAATTCAGACTTTTCTCAGGTTTCCTCGACGATGCAAGTAATGGAGCCAGTTTCGGTAAATGATACTTTTATGAACATTTCTGAAGAATTGTCGCACCTTCTGAATTCTGGGCCTACTCCTCCATCAGACGAGTTCCGACAATACGTTAATGATATAGATGAAGaaTACATGAAATTGCTAATGAATGATGTCCGACCAGAATATCAACTAGTTGCAGATAGCACCGATACCGACAATACTCATCAGTTTGCTCGGGAAAACGTTCTGAAAGCATTAGATATCGTGAAGGATGGAAACAATTCTGCAGAAGCAAAAAAGCAAGTCTTAATGTTGCTGAGAGAATCAACAGTGTACAGCGACACTCCTTTGCATTATGCATTAAGACACGACcaaataaaaattgcgaaaagtaTACTTCAACTTATAGCAAGCGACCTAGCAACTTACAAGCCGAttttagatttacaaaattgttcatTCAAGACTCCTCTACATTATGCGGCAATGAAAAATCAACCTGAAGTTGTGGAAGTTCTGCTGAAACTCGGAGCTGATCCAAATATATGGGATGAATCTAATTATTCGCCTCTGCACGATGCTATTCaagagtCGACCTCAGGGCTGTGCGTTGATGCATTGTTGTTAAGCCCGGGAATTAAAGTGGAGCTGGATGCCATTTCTGAAACTGGCTGGTCAGCGTTACATTTAGCTGCGAAAGTAGGATCTTTGCATTCTGTTCGTTCGCTCGTTAATGCAGGTGCTGATGTCAACATTGGTGAAGACTCATATGGTAGAACCGCTCTTCACATAGCCGTCGAAGGTGGCCACAAAGATATTGTCGCCTATCTTCTGACACATACCAAAATCGATGTGAACAAAAAGAATTATGGTGGTAATACGGCATTACACGGAGCTGTAGTCAGAGGTGGCACTCTCGCTAAAGAACTCTGTGAACTCTTAACGAAACACGGTGCTGACCCAACAATTCAAAACGACAACAACAGCGATGAGGATGATGTTGACAGCTCTGCAGAAAGCAgcaaTCTGAACTCGCCTGCCGTACCCCTTGAGAAAGATAATGAGATTGAGcaacttgtaataaaaattgaaaaagatgaCGACCAAGAAGAGCCAAGAATGGGAAAAACGAGTTTTGATCTTGCCGCAGATAATGTTGAGTTATTGACTCTTTTGGAGTCGAAAAAATCAGCCGAGAAAAAATCAGCCGAGAAAAAATCATTAACCGAACAAATGGAAGAACTGACcgttgataaaataaaacaggaaGTCGAGGAAGAATCTGAGTTAAGCGAAGAAGGCGAAAGAGAACTCGAAGATGAAGAGCTGGACAAAATAGTCAAGATCCTAAATCTAAACAATGGTTGGGAAGAACTTGCTGAAAAGACCGGCAATGGTTTTACAATCAGGTCTTTGAAGAAGTGCTCTAATCCTACATTGCCCTTAATCAACAAAATCAAGCTGAAAGAGAACGGCTTGACGGTGAACCGAATGATCGAACTTTTAGAGTCTCTGGATGAAACAGAAGCACTCAGTGTACTTACTAAGAAAAGAAGATAA
- Protein Sequence
- MPDVYENINVYQSYNLRTAYDQDNFYTFPHDQHMMNSSDSYSPYSMDSPHTMEAVSPGSFTGSLSQTENILHDLQNAEYQDLGSPQLQIVIQPVDKFRFRYKSEMMGTHGSLLGEKADRSTRKEVPTVKLFNAPLMTKAIIRCTLVTSDEERRMPHAHHLVMRHGNDDEDDPHEIEVSEENNYTAAFCGMGIIHTAKKNIKDELVRKRKREVIEEKVRQKKGSTLTVREESEIKMEVEAAQKWMNLNSVALCFQAFAFDNNSILNPITKPIYSHPINNLKSALTGELKICRIDKNTSSCEGSEEIWILVEKVGKKNIKIKIYEVDDYGNETWSDYGRFSELDVHHQYAIVFRTPPYKDRNITSPKEVFIKLERPTDGECSNSMRFTYKESNKTLSRKRARVTPSSGNSDFSQVSSTMQVMEPVSVNDTFMNISEELSHLLNSGPTPPSDEFRQYVNDIDEEYMKLLMNDVRPEYQLVADSTDTDNTHQFARENVLKALDIVKDGNNSAEAKKQVLMLLRESTVYSDTPLHYALRHDQIKIAKSILQLIASDLATYKPILDLQNCSFKTPLHYAAMKNQPEVVEVLLKLGADPNIWDESNYSPLHDAIQESTSGLCVDALLLSPGIKVELDAISETGWSALHLAAKVGSLHSVRSLVNAGADVNIGEDSYGRTALHIAVEGGHKDIVAYLLTHTKIDVNKKNYGGNTALHGAVVRGGTLAKELCELLTKHGADPTIQNDNNSDEDDVDSSAESSNLNSPAVPLEKDNEIEQLVIKIEKDDDQEEPRMGKTSFDLAADNVELLTLLESKKSAEKKSAEKKSLTEQMEELTVDKIKQEVEEESELSEEGERELEDEELDKIVKILNLNNGWEELAEKTGNGFTIRSLKKCSNPTLPLINKIKLKENGLTVNRMIELLESLDETEALSVLTKKRR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -