Tdro044973.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Trichopria drosophilae
Gene Symbol
tfip11
Assembly
GCA_030407085.1
Location
CM059584.1:25215468-25223201[+]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.4e-101 6.6e-97 326.8 15.3 1 275 396 663 396 663 0.99
2 2 0.021 9.9e+02 1.5 0.1 243 271 676 704 667 708 0.82

Sequence Information

Coding Sequence
ATGTCGGAAGACGAAGTCGAACGTTTTGAAATCACAGACTATGATCTGGACAGCGAGTTTTGCCCTAATCGCCGACGCAAACTtacaaaacaacaacaaatgcttgGCATTTGGGCCGATGACAgcgaagaagaagaagatgcAAGACCGTCCTTTAAATCGTTCAAGAAAACACCGAAAAATTATTCTGCTCCAGTTAGTTTCGTGGCTGGAGGAGTACAGCAATCTGGTAAaccaaaagaagaaaaaaaatcagatgacgaaaatgatgatgatgatgatccGTTAGTGATAGGTAGAAGAGGAGACAAGAATTATGTACCGAACAGTTCTAGcgACTCTGAGGAGGAAGTCCCAAGACATAAGAAAGGTAGACAGCAAACCTCCCATTTAAATCACGAGGGAGACATTGCTGGACTGAGGAAAAAGCGAGCTCCTTTAAATCCACACTTAATAAATTCTGGAGTTGGTAGTTGGGAAGTTCACACGAAAGGAATTGGAGCCAAACTATTGCTTCAAATGGGTTTCGAACCAGGGAAAGGTCTGGGTAAACAATTACAGGGTATTAGTGCGCCAGTCGAGGCAACATTACGGAAAGGTCGTGGCGCGATAGGTGCTTACGGACCAGAAAAGACACCAAAGTTAGCtgaaaagaagaaagaagaagaaACCAAAAAGAAAGATGATAAAGTAAAAGTAGCGCATTGGAGAAAAACCAACAATGCAAACGTTAAGAAACAATCGAGTTACAATTATCGCAGCATAGATCAAGTAATTGAAGACGGAAAGTTACGACCCAATCGTAAAATGCAAGTAAGCAGCGAATTAAGTAAAGTGAAGGTTATAGACATGACTGGACCCGAACAACGAGTACTCAGCGGTTATCATGCAATATCCAACATTAATCAACAACCCGACGACACTATTATGTCTACGGAGAAGAAAAATAAAGGATTTTACGAGTTACCAGAGCTACAACATAACTTGGATCTGCTTATGGACATGTGCGAACAAGATATTATTCAAAACGATCGGAGAACAAGGTATTTGAGCGATAGAGTGGTTGCTCTCGAGGCAGAGAAAGAAACACTATCCAAAGTACTCGTTCACCACGCAAAGTTAATAGAAACATCAGAAAATGTATTAGCAATGGTCGAAAGACTCGTCGAGAACAGTGACTTATCATTGAGGGAAATTGCAGAATCGTTTagaaatttgcaagaaaaattCTCTGAAGAATATAGATTGTACGATATTGGAGAGTTAGCCAGTGGATTTGTAACTCCGAAAATTAAAGACTGTTTAAAAGGTTGGAATCCTGTAGCGCAACCGAAGTTACCggtggaattgtttaaagacTGGAAAGCTATCTTGGAATCTGGAGCAAAGTCGCATCAGCAAAGGGAGATGCATCCTTACGACCAACTCGTTTGGAATACTTGGATGCCGTCAATTCGAGGCGTCATTATggAATGGGCATGTAGACAACCGGATCCTTTAATCGATTTATTAGAACATTGGTTGCCGCTACTTCCGAGTTGGATTTTAGAGAATTTGTTGGACATGCTTATACTTCCGAAACTTACTCTCGACGTCGAACAATGGAATCCACTGACCGACACAGTGCCAATTCATACTTGGATTCATCCATGGCTACCGCTCATggGAAGTCGAATGGAAACACTGATTTATCCAGTAATACGCAGAAAGTTGGGTTCGGCTCTCGGTGCTTGGCATCCATCGGACAGATCAGCCAGGTTAATGCTGCAGCCTTGGTCTCAAGTATTTTCGAAAGGGGACATGGAAGCATTCttagtaaaaaacattttaccaaAACTTCAAATTTGTCTATCGGAATTTATCATAAATCCTCATCAGCAACATCTCGACCAATGGAATTGGGTGTACGACTGGAAAGATTTATTCCCGGTTCATACAATGTCTTCGTTGTTGGATAAATTCTTCTTCCCAAAATGGCTTCAGGTTTTGGCATTATGGTTGAATCATAATCCGAATTACGATCAAGTAACGAACTGGTACATGGGATGGAAAAGGATGCTCAGTGAGAAACTTCTTGCCGAGCCAAATGTTAAAGAACATTTCAATAAGGCGTTAACTTTGATGAACAGAGCAGTTTCATCGCCGCAAGGATTATTACCAGGATCTGTTGAACAAGTCTCGTATTTAACAAGTCTCGAAAGAAGTCAACCGCCACCTACGATTCCAGCTATATCGCAGCCAAGAATGGAGAGACTCGCAGAGGCAGTTAGGACAGCATCTCAAATACCTCAAGGATTCAAAGACTTAGTTCAGAAGAAATGCGAAGAGAGGGGAATTCTTTTTATGCCGATGGCCAACCGATACAGAGAAGGGAAACAACTGTATAAAATAGGGAATATTCAAGCTTATTTCGATGGCAATGTCGTGTATATTTGCCACGGGACGAATTGGGCTCCGACTCATTTGAATGCCTTACTCGATATGgcagaaatttaa
Protein Sequence
MSEDEVERFEITDYDLDSEFCPNRRRKLTKQQQMLGIWADDSEEEEDARPSFKSFKKTPKNYSAPVSFVAGGVQQSGKPKEEKKSDDENDDDDDPLVIGRRGDKNYVPNSSSDSEEEVPRHKKGRQQTSHLNHEGDIAGLRKKRAPLNPHLINSGVGSWEVHTKGIGAKLLLQMGFEPGKGLGKQLQGISAPVEATLRKGRGAIGAYGPEKTPKLAEKKKEEETKKKDDKVKVAHWRKTNNANVKKQSSYNYRSIDQVIEDGKLRPNRKMQVSSELSKVKVIDMTGPEQRVLSGYHAISNINQQPDDTIMSTEKKNKGFYELPELQHNLDLLMDMCEQDIIQNDRRTRYLSDRVVALEAEKETLSKVLVHHAKLIETSENVLAMVERLVENSDLSLREIAESFRNLQEKFSEEYRLYDIGELASGFVTPKIKDCLKGWNPVAQPKLPVELFKDWKAILESGAKSHQQREMHPYDQLVWNTWMPSIRGVIMEWACRQPDPLIDLLEHWLPLLPSWILENLLDMLILPKLTLDVEQWNPLTDTVPIHTWIHPWLPLMGSRMETLIYPVIRRKLGSALGAWHPSDRSARLMLQPWSQVFSKGDMEAFLVKNILPKLQICLSEFIINPHQQHLDQWNWVYDWKDLFPVHTMSSLLDKFFFPKWLQVLALWLNHNPNYDQVTNWYMGWKRMLSEKLLAEPNVKEHFNKALTLMNRAVSSPQGLLPGSVEQVSYLTSLERSQPPPTIPAISQPRMERLAEAVRTASQIPQGFKDLVQKKCEERGILFMPMANRYREGKQLYKIGNIQAYFDGNVVYICHGTNWAPTHLNALLDMAEI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01489374;
90% Identity
-
80% Identity
-