Tni004008.1
Basic Information
- Insect
- Trichoplusia ni
- Gene Symbol
- FTZ-F1_1
- Assembly
- GCA_003590095.1
- Location
- NC:2121831-2122711[+]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.4e-53 1.7e-49 169.0 0.6 239 408 1 167 1 168 0.98
Sequence Information
- Coding Sequence
- GTCGACGACCAGATGAAGCTGCTGCAGCACTCATGGTCCGACATGTTGGTGTTAGACCACCTCCACCAGAGGATGCACAACGGCCTGCCCGATGAGACTACCCTTCACAACGGCCAGAAATTTGACCTCCTGTGCCTGGGACTCCTAGGCGTACCGTCTCTCGCTGATCACTTCAATGAGCTACAGAACAAACTCGCAGAGCTCAAATTTGATGTACCAGACTACATTTGCGTAAAATTCTTGCTTCTACTAAACCCAGAAGTGAGAGGCATCGTCAACGTCAAGTGCGTCCGAGATGGCTATCAGACAGTACAAGCTGCTCTTCTCGACTACACTCTCACCTGTTACCCCACGATACAGGACAAATTCGGCAAACTAGTAATGGTGGTACCTGAGATCCACGCTCTGGCTGCCCGAGGAGAAGAACATCTATACCAGCGGCATTGCGCTGGCCAAGCGCCCACACAAACACTTCTCATGGAAATGCTGCACGCTAAGCGCAAGTGA
- Protein Sequence
- VDDQMKLLQHSWSDMLVLDHLHQRMHNGLPDETTLHNGQKFDLLCLGLLGVPSLADHFNELQNKLAELKFDVPDYICVKFLLLLNPEVRGIVNVKCVRDGYQTVQAALLDYTLTCYPTIQDKFGKLVMVVPEIHALAARGEEHLYQRHCAGQAPTQTLLMEMLHAKRK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00686401; iTF_01529250; iTF_00737539; iTF_00361738; iTF_00737585; iTF_00361685; iTF_01529304; iTF_00686461; iTF_00844484; iTF_00844409; iTF_00642375; iTF_00642466; iTF_00751239; iTF_00179523; iTF_00799363; iTF_00675205; iTF_00179398; iTF_00800267; iTF_00800236; iTF_00675182; iTF_00799318; iTF_00801017; iTF_00801052; iTF_00751262; iTF_00318152; iTF_00033865; iTF_01176232; iTF_01083466; iTF_01496675; iTF_00922956; iTF_01140978; iTF_01415997; iTF_00022911; iTF_00207052; iTF_00353136; iTF_00674352; iTF_00994413; iTF_00791253; iTF_00055481; iTF_01451513; iTF_00341437; iTF_00063704; iTF_00341376; iTF_01091998; iTF_01017791;
- 90% Identity
- iTF_00844484; iTF_00844409; iTF_00642375; iTF_00642466;
- 80% Identity
- -