Basic Information

Insect: Trichomalopsis sarcophagae
Gene Symbol: -
Assembly: GCA_002249905.1
Location: NNAY01000980.1:9851-17343[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.032 3.4 8.1 4.2 1 23 431 453 431 453 0.98

2 18 3.3e-05 0.0035 17.5 1.1 2 23 489 510 488 510 0.95

3 18 0.0004 0.043 14.1 3.5 1 23 516 538 516 538 0.99

4 18 0.0011 0.12 12.7 0.1 3 23 546 567 544 567 0.93

5 18 0.24 26 5.4 1.8 1 23 574 597 574 597 0.98

6 18 3.8e-05 0.004 17.3 1.2 1 23 601 623 601 623 0.97

7 18 0.0079 0.85 10.0 0.6 1 23 629 651 629 651 0.95

8 18 3.6e-05 0.0038 17.4 1.3 1 23 657 679 657 679 0.97

9 18 0.00066 0.071 13.4 0.1 1 17 684 700 684 701 0.90

10 18 0.15 16 6.0 1.0 1 19 1143 1161 1143 1165 0.85

11 18 6.5e-05 0.0069 16.6 4.4 1 23 1200 1222 1200 1222 0.98

12 18 0.017 1.8 9.0 0.6 1 23 1228 1250 1228 1250 0.98

13 18 5.8e-05 0.0062 16.7 0.4 2 23 1257 1278 1256 1278 0.97

14 18 1.5 1.6e+02 2.8 0.9 1 23 1284 1307 1284 1307 0.90

15 18 2.9e-05 0.0031 17.7 2.0 1 23 1311 1333 1311 1333 0.97

16 18 0.016 1.7 9.0 0.4 1 23 1338 1360 1338 1360 0.97

17 18 3.3e-07 3.5e-05 23.8 0.9 1 23 1366 1388 1366 1388 0.98

18 18 0.00013 0.014 15.6 0.6 1 21 1393 1413 1393 1414 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.032	3.4	8.1	4.2	1	23	431	453	431	453	0.98
2	18	3.3e-05	0.0035	17.5	1.1	2	23	489	510	488	510	0.95
3	18	0.0004	0.043	14.1	3.5	1	23	516	538	516	538	0.99
4	18	0.0011	0.12	12.7	0.1	3	23	546	567	544	567	0.93
5	18	0.24	26	5.4	1.8	1	23	574	597	574	597	0.98
6	18	3.8e-05	0.004	17.3	1.2	1	23	601	623	601	623	0.97
7	18	0.0079	0.85	10.0	0.6	1	23	629	651	629	651	0.95
8	18	3.6e-05	0.0038	17.4	1.3	1	23	657	679	657	679	0.97
9	18	0.00066	0.071	13.4	0.1	1	17	684	700	684	701	0.90
10	18	0.15	16	6.0	1.0	1	19	1143	1161	1143	1165	0.85
11	18	6.5e-05	0.0069	16.6	4.4	1	23	1200	1222	1200	1222	0.98
12	18	0.017	1.8	9.0	0.6	1	23	1228	1250	1228	1250	0.98
13	18	5.8e-05	0.0062	16.7	0.4	2	23	1257	1278	1256	1278	0.97
14	18	1.5	1.6e+02	2.8	0.9	1	23	1284	1307	1284	1307	0.90
15	18	2.9e-05	0.0031	17.7	2.0	1	23	1311	1333	1311	1333	0.97
16	18	0.016	1.7	9.0	0.4	1	23	1338	1360	1338	1360	0.97
17	18	3.3e-07	3.5e-05	23.8	0.9	1	23	1366	1388	1366	1388	0.98
18	18	0.00013	0.014	15.6	0.6	1	21	1393	1413	1393	1414	0.94

Sequence Information

Coding Sequence: ATGGAGCTCGTGGAGGAGGAAGCCCAGGTTTGCAGGCTCTGCGGTAATTCCGAGAGCATCTACATCGACGTCTTCGGCGAGGAGGGCACCAAGCGTTTCCTCGACTTCAAGATCCGCTCGAAAATTAACATTCTGATAGATGAGAGCGACCCTCTGCCGAAGGCGATCTGCGTTCAGTGTCTGGGGAAACTTGAATTCGTTTGCGACTTCCAAGAGGAGTGTCTACGCACCCAGCAACTGTTACGCGATCAGTACAATCTGCCGCCTTTGTCAGACATTGAAGAAAATAAGtctgaagaaaataaatctcaagATTCTGCTCCTAGTACATCGACTAGCCTTAAGAATAATATAACCATAAATGAGGGAAACAACGCTGGGGGAAATCTAGATAATAATGGTTCAGATAATattaacaacaacaataataatagcgataaaaatttcaacccCCTCAATGATGAACTTGCTCAAGATGCCAGTTCATCTGCGATTTCAAAAAATGCTACCAAGTCACAAAGAAGTCTTCGTAGCCAACAGAATCAATCAAAAACTTCCAATAGTAAAAAAGAACCTTGGCAATCGCGAGTTGACGATAGTAACAAGCAAGCTTCTTCGAGTATACAGCAACCAGAAATTACAACAACTACTCGTAGACTGCGAAGTAGGCAGAGTATAGATGTATCTGAAGGAgataatattgttaaaaatgccAAACGTGCCTCTATAACAAAGAAAAGACTGAGAAGTCACAATAATACTGTAGATAGTACAACAAATTCTAAATCCATTTCTGattcaaatgaaaatgctggaaagaaaaatcaagtggatcaaaataacaaaattcaGATTCCTACCAATACTTTGAATAAAGTATTATCCGCTATAACTAATGCACCTGGTATTGGTGTTTCTGTCAAGGAGTCTACAAATCGCACTAATGATGCTGAAGATATAAGTTTCACTGTTGAACTGTGCAAAAAGCAGGAAACAGAATCTTTAACGGTATTGGCTAAAGTTTTTCCTGATCAAGGATCCTGCTTGGTTGATAAATCTATTGTTACATTCCTAGAAAACGGAACTAGCGAGGAAGTAAATAACCTTGTTAATAATATTGTCAGTCCTAATACTTCAAAAGATGAATCCCGCAGTTTAATCGACAAGTTACAAAATGCTGAGGACATTGCTAATAGTGCTCGAAATCCAGAAGAGCTTTTCAAAATGGATGGCGAAGAAATTCATGTTGATGAAAATGTTGAACAAGTCAATGTAAATAATCAAGTAAGCTATGTTTGTAAACTATGCCGAAAAATGTATGAGCGCAAAGATAAGTGCACTGTGCATGTAAAAACTCATTTGGGTATAAAACAGTACATGTGTATTTTATGCCAAGCTAAATTTGTCTGTAAATCAGATGTCATGAAGCATATCCGATGCTCGCACACTAATCCGCGACCTATTTCATGTCCACACTGTCCAAAAAGATTTAGATCTAAATTTGATTTGGCAGAACACAATAATGTACATAAAGGGGTTAAACCTTATCAATGTGCAGATTGTGATCAAAGTTATCATCATAAAGTTTCTTTACAAATGCATGTAAAATCACACATGCCTCCACAAAATTTAGCTTGTGAATATTGTGGCAAAATCTTTCCTTATCGTACGAGATTACTCAGTCATATTGGCAGTGTCCATATGAAAGATCGACGTAATTTTCGATGTCGTTTCTGTTACAATTTATACTCAAGTTTATCGGTTTTAAATGAGCACATAAAAACTCGTCATACAACAACATACACATGTGAAACTtgcaataaaacttttaaagtTGCATCCAAGTATAAAGCTCATGTGTTACAACATAGTAATCCAAAACCATTTCTATGCAAGATATGTAACAACAGATACGCATCAAAAGCATTTTTGAACGAACATGTGCTAAAGCATCAAGGAGTGCGCAAACATGTCTGTCAAAAGTGTGGGGCTGCATTTGCACAAGCAAGTCACTTGGCTGCTCATCGTCATGTTCATGAGGAAAAAACTCACGCTTGTCCTGAATgtggaaaaatgtttaatcgGCGAGATAACATGAAAatcGAGCCAAATGATGGACTACCTCAAATAATATGTTTGAAATGCTTAGGAACAATAGAATTTTTATGCGATTTTCATAACATGTGCCATAATACTCAAAAGAATTTGGGATCTTCTGTAGagggagcaagcaataatgaaaaatctcaaGATAATCTTGAAAGTGATGGAGAGTCTAATAAAGAGAATGTTTTACCAATTAGTAATGAAAAACCCAAATCCAAGTCATTGCAAACAGATCAAACAAAAGTCTCAAGTAATACTGCAGAAGATGACAAAAATATGGCTCCACAAGAAAAAGAGGTtggaaatgataaaatagCTAACGTACCAAATGAAATCCAAGATTTAGATGCCACTAACTGTAAGAAATCTAGCAatcaaatttctaaaaaagaaaaagcatcTGATAAACCTGTTCCAAATGATGAAAATTCGCAAACCGACCAAACTCCTACATCAGATTCAGTAAAGAATgcagtattaaaaaatcaagttcaACGATCTCGATCAACCAgatctgaaaaaaatgataaaaaaattaatagaagaTCTAAAGCATCATCATCAGTTGTAaatatagtgaaaaaaaataatagtaagcaaacaaaaaaaacgattgataaatattttgaaacacCAGCTCAATGTCAGAATAAAAGTACAAATGTTGAAAATGTTAATCCTAATCAGACACAAGTTGTTACTACTAAAAACTCTAATGAAGATGCAGaacaaaataatgttatatttgaAGGAACCATAATTAATTCTCCAGGTGACACTTCCATTATAATGCCTCTAAAAACGGAATCGTTTAATGATCAATTACGACTTGAGGATGTTGAAATGGCAGATGGCAGTGAAATCGTTCAAGCTCAAGAAATAGTTTGGATATCTAGCAACTCTCAACAATTGCCTGAGCCTGAAACACCAAAAACAATGAACGCAAACCAATCCAAGACTACTAGTCCTGCTCCAGGAGATGAAGCTGAGATTATGAAAATGGATGGAACCTTAATAGTACAAACTTCAGGGCAAGATGTGAATTTAACTACCTCTACTGAAAAAGTAATTGTGCTTGAAGTGCAATTACCCGCCAAAGAAAACTCAGTTGCTTTACCAAAATCTACTGAAGTTCTCAAGAGAAATCGCACTATATCAAATGTTAGTTCGCGTCTCTCTAGTGGAGGGAAATCTCCCAAGATATCCCAGTTAATGACTGATcaacaaaaaaaggaaattgaAACACTTTATTCAATTGACATGACTCGAGTTGACGAAACAAAAGTTAATCAAAATGTCAAAACCCTTGATAAATGCAAATTCGAGTGCAAAATTTGTGATACTGTTTATCCACGCCTTGACAAATGCcaagtTCACGTATGGCGACACTTGGATATGAAACCATACTTATGTAAAGCATGTGATTTCTCCACATTAACAGTCAGCAATATTCGTTGTCATATCAGAAAAAGTCACTTGAAAATTAAACCGTTTGAATGTCATATATGtaataaatgttataattCAACTACATTACTTGAAGAACACCTTAATACGCATACAGGTGCAAGACCTTATCAATGTGATTTTTGCGAATTTGCAAGCTCGAGTAAGCAAGTTCTTGCTCATCACATACTAATtcacaaaaaagaaaagGATATTAAATGTGACATATGTGGTAAAGGATTTTATTCGAAAGGAAGGATGAAGGCTCACAGAATCACTCATAATAAGGAACAGGCATTCAAGTGCAAACTCTGTTCAACCTATGTTTTACACGAAGACGCCCTTGAACGACATTATGCGAACGTTCATACCAAAGATTACGTGTGTAAAATTTGCAACAAGGTTTACAAATCAAAGAAAGCTCTGCATAATCACGAAAGTGTCCATTCTGAAGCAAAATTTGCATGCCCCATTTGCCCCAATGTATATAAAAGCACCCACATATTGAAAGAACATATTTTGAAACATCAAGGAATCAGACAATACAAGTGCAATAGTTGTAGCAAGTCCTTTGCTCAGCAGTCACATCTTGCAGCACATATGGCTGTTCATAGTAACATAACGTACAATTGCCCTGGCTGTCAAAAAGGATTCAATCGACATGACAATATGAAAGTTCACGCTAAACGTTGTGAAAAATTCTTAGCAAACCCTGCACTACAAAGTTTACTAACAAAACGGAAgataagtttttcaaaaaataatacagctaaagtaagtatacaaaaagaaaaccaaaataattctgcaccaaaaaaaaatcgtcaaacCTCGAATAATGATTCCGCTAAGGCTGTACCTCACGAGCCAGCGAAAGATCTACAATCAAAAGATAACAGTACAACTGCAGTTGAAAACATATTATCATCGAAAGAATTTTGA
Protein Sequence: MELVEEEAQVCRLCGNSESIYIDVFGEEGTKRFLDFKIRSKINILIDESDPLPKAICVQCLGKLEFVCDFQEECLRTQQLLRDQYNLPPLSDIEENKSEENKSQDSAPSTSTSLKNNITINEGNNAGGNLDNNGSDNINNNNNNSDKNFNPLNDELAQDASSSAISKNATKSQRSLRSQQNQSKTSNSKKEPWQSRVDDSNKQASSSIQQPEITTTTRRLRSRQSIDVSEGDNIVKNAKRASITKKRLRSHNNTVDSTTNSKSISDSNENAGKKNQVDQNNKIQIPTNTLNKVLSAITNAPGIGVSVKESTNRTNDAEDISFTVELCKKQETESLTVLAKVFPDQGSCLVDKSIVTFLENGTSEEVNNLVNNIVSPNTSKDESRSLIDKLQNAEDIANSARNPEELFKMDGEEIHVDENVEQVNVNNQVSYVCKLCRKMYERKDKCTVHVKTHLGIKQYMCILCQAKFVCKSDVMKHIRCSHTNPRPISCPHCPKRFRSKFDLAEHNNVHKGVKPYQCADCDQSYHHKVSLQMHVKSHMPPQNLACEYCGKIFPYRTRLLSHIGSVHMKDRRNFRCRFCYNLYSSLSVLNEHIKTRHTTTYTCETCNKTFKVASKYKAHVLQHSNPKPFLCKICNNRYASKAFLNEHVLKHQGVRKHVCQKCGAAFAQASHLAAHRHVHEEKTHACPECGKMFNRRDNMKIEPNDGLPQIICLKCLGTIEFLCDFHNMCHNTQKNLGSSVEGASNNEKSQDNLESDGESNKENVLPISNEKPKSKSLQTDQTKVSSNTAEDDKNMAPQEKEVGNDKIANVPNEIQDLDATNCKKSSNQISKKEKASDKPVPNDENSQTDQTPTSDSVKNAVLKNQVQRSRSTRSEKNDKKINRRSKASSSVVNIVKKNNSKQTKKTIDKYFETPAQCQNKSTNVENVNPNQTQVVTTKNSNEDAEQNNVIFEGTIINSPGDTSIIMPLKTESFNDQLRLEDVEMADGSEIVQAQEIVWISSNSQQLPEPETPKTMNANQSKTTSPAPGDEAEIMKMDGTLIVQTSGQDVNLTTSTEKVIVLEVQLPAKENSVALPKSTEVLKRNRTISNVSSRLSSGGKSPKISQLMTDQQKKEIETLYSIDMTRVDETKVNQNVKTLDKCKFECKICDTVYPRLDKCQVHVWRHLDMKPYLCKACDFSTLTVSNIRCHIRKSHLKIKPFECHICNKCYNSTTLLEEHLNTHTGARPYQCDFCEFASSSKQVLAHHILIHKKEKDIKCDICGKGFYSKGRMKAHRITHNKEQAFKCKLCSTYVLHEDALERHYANVHTKDYVCKICNKVYKSKKALHNHESVHSEAKFACPICPNVYKSTHILKEHILKHQGIRQYKCNSCSKSFAQQSHLAAHMAVHSNITYNCPGCQKGFNRHDNMKVHAKRCEKFLANPALQSLLTKRKISFSKNNTAKVSIQKENQNNSAPKKNRQTSNNDSAKAVPHEPAKDLQSKDNSTTAVENILSSKEF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01190662; iTF_00144042;
90% Identity: -
80% Identity: -