Tsar002174.1
Basic Information
- Insect
- Trichomalopsis sarcophagae
- Gene Symbol
- spop-1
- Assembly
- GCA_002249905.1
- Location
- NNAY01002344.1:16076-20813[+]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 8 1.6e-16 2e-14 53.4 0.1 7 106 183 282 178 284 0.91 2 8 1.4 1.8e+02 2.1 0.1 77 109 285 317 281 318 0.89 3 8 1.6e-28 2.1e-26 92.0 0.0 5 106 635 736 632 740 0.93 4 8 1.7 2.2e+02 1.8 0.0 80 109 742 771 738 772 0.84 5 8 0.95 1.2e+02 2.6 0.0 59 107 768 818 764 820 0.82 6 8 1.8e-22 2.3e-20 72.6 0.0 5 106 1063 1165 1060 1169 0.91 7 8 1.1 1.4e+02 2.4 0.0 79 109 1170 1200 1166 1201 0.88 8 8 0.46 60 3.7 0.0 83 109 1223 1249 1215 1250 0.89
Sequence Information
- Coding Sequence
- ATGTATTACAGGGACCCACCGAAGACGGAGGAGGAGAATGACCCATGTTGCCAGCATGGTGATTTCCAAACATTGCCCACCTCGGTAGTGCTTTCCTCCTTCAGCGTGACTGataattataaagaaattgaGGACATCAGGATCTCCAATAAGAAGATCACATTACTCCAAGAGCCGAACGAATCTCTGTCGTTGAGTTGCCAAATCCATCACGATGGTTTTGTTAAAACCGGATCATTGTACGTCTGTAATCTAGAATTATCCTTCGATAACGATCTCCATCACATATCGCAGTCTTACTGCTACGACATAAGCCTGAAGGCAATGATATCCAAGCGCGGCATTGTTTTCCACGTGCCCTTGTCGACGGACAGGCTGATACGcaaggaaaacaaaatatcTTCGTACGTAAACTTTTTCCTGAATACCGACAACATCGATTCAAGCCAAGATTGTCACATGTGCTGCAGCATTAATCGTATCAATTTAGCGACATCGAGTGCAGATCCGGAATTACCCCTCGGCGAggcactgctgctgcaaaaGCGCTACGCCCTCCCCAACGCGCGTCTCCTTGTGGATAACTACGAGTTGACAGCGCACCGCTCGGTTCTCGCGCAGTACGACTCGGTATTTTACGACATGTTCTCGCGCGAAGATTCCGCGGAGTGCCGCACCGGAGTGGTGGAGATCCACGACTTCGAGGCACCGGAGATACGAGCGATGCTGCAATACCTCTACACGCGTCGCACGAACGGCTTTATCTCCGAGTTTCCGGTGAAGCTGATGAAGGTGGCGCACGAGTACAAAATCACCGGACTGATTGCCAAGTGCCAGGAGGCCATGATGTTCGAGATGAGACAGGACAACGTCATCGAGTTCCTCGAGCTGGCGAAGTCATGCGAATTGGAAGAATTGAAACGCAGCGCCACGACCTTCATCGCTGAGCACGAGGAGGAAATGCTCGGAGATCCGAGATATCTGCTTTTTCTGCAACGCGACTTGAGCGTCGACAATCTCGCTAAAACGCTTAAGGCCATCGCTAAGCACGGCGAGTTGTCGAGCATTAAAGATAAGACATTTGAGTTCGCGAAGGAAAACAGCGCGGAGTTAGCGGAAAACGACGATTATTTAGGTCTGTTCGAGTCTCATCCACAGTTCATGAAGGAAATCACTGACCATGATTCGGCCAAAATAAGCGACAAGAAGAGGTGGGCCTTTAGCCTTACATTCCCACTCCGCTGCCCGCTGGAGAGTTTAGTGGCATTCGAACGCTCAGAGTCAGAAGTACTCATCTACAATAAAATTCAGAGCTCTACAGTGTATTTTATTCAAACAGTGACCATGGAGACCGTTGCAACGCGTAAAATTCTAGAAATAACGAAGAATAAGACGAAGCCTACGAAAAAGTCAGCCGACAACTGCACTGATTGTCACGAAGGAGGCTTCCCTTTGGTTGCCTTGAAAACAGAACATAACTTTGTTTCTTGGGAATTTGTATGCCCCCGCAAAGTGACCTTAAAGGAATGCCCTAAAGAGTCTCTGATTCTGGATCTTAAAAGAAATCATTGCAACGAATACAATCTGATTATACAATTCGAGAATAAACTTCACGAAGTTTCAGAGGACTACTACTACGAAATAAACCTAAGGGTGCATTATAGTCAAGACAAAAGATTGTACCACGTGCCGATGTTTTCCTTTACAGAGTTGCGTGGAACGGACAGCGTAATTTTCGAAGACTTTCAACTCGATATCCGGGTAAATTCGACCGGTTTCACCAACATAGTGACTTACAACAACATCTTCTGTCTGCAACGTGCTAAACCGCTGCACATATGTTGCAGCATCAGACGGTCCAACACGATATTCAAGAAATCTGAACTTCCACGAGACACGCTACTACGAGAGAATCTCCTCAGCGATGTATGTCTCAAGGTAAAGGATCGGGAATTCCAAGTACACCGGGCGATTCTCGCAATGCACAGCACGGTGTTTCGGGCCATGTTCTCGCACGCGGTGACGTCGGAGAGCCGCACCGGACTCGTGGAGATCAACGATATCGAGGCACCGGTTCTCGAGGAGATGCTGCGCTACATCTACACGGGCAACTTGAACGAAGATGGTCCCAAGTTTCCGGTGAAGCTGCTCAAGGCAGCTCACAAGTACGACATCGACGGACTAGTGTCCAGGTGCGAGGAGGCTTTGTTGTTCCAGATTAGGTTCACCAACGTCGTCGAGTTCCTCGACCTGGCGAACCTCTACGATCTGAAAACATTGAAGCGCGGCGCCATAAGCTTCATTAGTAAACACGAGGAGGAATTAATCATGGACCCAATTTACCAGGAGTTTCTGCGTCGCGATCTAAACGTAGACACGTTCGTCAACACGCTCAAGCTCTGTTCCAAGTACGAGCTTCCGGAAGTCAAATCAGCGGCATTCGAGTTCGTCAAGCGATGCGGCAAGGAGATCATGAACCACGAAGAGTATCTGAAACTGTTACAGGCTCACTCGGACTTCACACAGGAAATGCTGTCTCACGCACGGCTTTCAAATATAGCTATAGATGGCAGCAACTCAATTTTCTCCGCCAAAATACATCCGCGCTGCTGCTTCACCGCCAGCATCGCGTCCAAGCCACAAGTACGCCAGCTGATCCGAGACAGCATGACGGAGCCGTGTAACACTGCTGGTCTCTCCGAATCGTCCTCGAAGCCTTACACCTGGCTGGTCTACGACGACGAGTCGGTGAACGACGCCTGCGTGGCTTTCGCCCTACCAGGGATCGCCTTGAGGCAGGAACCAAGCGAGAGCCTGGACCTCGAGTACACTAGTCGCTACTActgcgacgtcgacgacgagcaTCACCTGAACAAGTACAGCCTGCGTCTGGTGTTCCGCAACAACCTGCACGAACTAGCCCGGGACTACGGCTACGAGGTCGTCGGCAGCGCGCTGCTACCACCTCGAGATGCGACCGACGACGAGGCTGCCGTTACCGAGAGGCCGTATCACCAGCTGCTGTTCGCGCACAGGAGACGGAGACTGACCGGGAGTATCGAGATCAAGGAGATCTTCAGTGTGAGGAGGTCGAGGTTGCTGCATCTGTGCTTCGGTATTCGCAGGTTCAGGGATCGAGACGACCAGGATGTGGAGGAGCCGGCCGAGCCTCACGCCGCGATGCTCCTTCGTACCGGCCTCTACAGCGATGTCAAGCTCAAGGTCAACGGCCGCGTCTTCCCCGTACACAAGCACCTGCTGAGCTCGCGCAGTCCAGTGTTTCGGGCGATGTTCGGCCACGGCGAGGTCTTCCCGGAGAATCGCGCGAACGGTTGCGTCGTCATCGACGACCTCGATCCCGAAGTGGTCGAGCAGCTCCTCGTCCACGTCTACACCGGCGAAGCTCCAAAGCTCGCCTCGATGTCGCGTCAGCTGTTTGAAGCGGCGCACAGGTACGAACTTGCGGAGCTACGCCGAGCTTGCGAGGAGTTCTTCGTGTTCGGTCTGAGCCGGGACAACGTCATCGAGATCCTCGACATGGCCGGTCTGTACGAGCTGAAGGAGCTGCGCCAGAGGGCGCTGGAATTCGTCAGGAATCACGAGACGGAAATGGCTACGGAGCAGAACTTTCGAAGCTTTCTCTGCAGAGATTTACGGATCAACGGCGTCGCGGACACTCTGAGGATGTGCGATAAGTACGGGATGGAGGAGGTCAAGGCCAAGGTGATGGAATTCGTTAAAGAGCACAGTAGAGAGCTGGCCGAGAGCGAAGGGTTCTTGGGGCTTTTTCGTACACATCCGGATCTGATGAGGGAAATCTTTGTCTATGTGCACAGATGA
- Protein Sequence
- MYYRDPPKTEEENDPCCQHGDFQTLPTSVVLSSFSVTDNYKEIEDIRISNKKITLLQEPNESLSLSCQIHHDGFVKTGSLYVCNLELSFDNDLHHISQSYCYDISLKAMISKRGIVFHVPLSTDRLIRKENKISSYVNFFLNTDNIDSSQDCHMCCSINRINLATSSADPELPLGEALLLQKRYALPNARLLVDNYELTAHRSVLAQYDSVFYDMFSREDSAECRTGVVEIHDFEAPEIRAMLQYLYTRRTNGFISEFPVKLMKVAHEYKITGLIAKCQEAMMFEMRQDNVIEFLELAKSCELEELKRSATTFIAEHEEEMLGDPRYLLFLQRDLSVDNLAKTLKAIAKHGELSSIKDKTFEFAKENSAELAENDDYLGLFESHPQFMKEITDHDSAKISDKKRWAFSLTFPLRCPLESLVAFERSESEVLIYNKIQSSTVYFIQTVTMETVATRKILEITKNKTKPTKKSADNCTDCHEGGFPLVALKTEHNFVSWEFVCPRKVTLKECPKESLILDLKRNHCNEYNLIIQFENKLHEVSEDYYYEINLRVHYSQDKRLYHVPMFSFTELRGTDSVIFEDFQLDIRVNSTGFTNIVTYNNIFCLQRAKPLHICCSIRRSNTIFKKSELPRDTLLRENLLSDVCLKVKDREFQVHRAILAMHSTVFRAMFSHAVTSESRTGLVEINDIEAPVLEEMLRYIYTGNLNEDGPKFPVKLLKAAHKYDIDGLVSRCEEALLFQIRFTNVVEFLDLANLYDLKTLKRGAISFISKHEEELIMDPIYQEFLRRDLNVDTFVNTLKLCSKYELPEVKSAAFEFVKRCGKEIMNHEEYLKLLQAHSDFTQEMLSHARLSNIAIDGSNSIFSAKIHPRCCFTASIASKPQVRQLIRDSMTEPCNTAGLSESSSKPYTWLVYDDESVNDACVAFALPGIALRQEPSESLDLEYTSRYYCDVDDEHHLNKYSLRLVFRNNLHELARDYGYEVVGSALLPPRDATDDEAAVTERPYHQLLFAHRRRRLTGSIEIKEIFSVRRSRLLHLCFGIRRFRDRDDQDVEEPAEPHAAMLLRTGLYSDVKLKVNGRVFPVHKHLLSSRSPVFRAMFGHGEVFPENRANGCVVIDDLDPEVVEQLLVHVYTGEAPKLASMSRQLFEAAHRYELAELRRACEEFFVFGLSRDNVIEILDMAGLYELKELRQRALEFVRNHETEMATEQNFRSFLCRDLRINGVADTLRMCDKYGMEEVKAKVMEFVKEHSRELAESEGFLGLFRTHPDLMREIFVYVHR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -