Tsar014469.1
Basic Information
- Insect
- Trichomalopsis sarcophagae
- Gene Symbol
- dmrta2
- Assembly
- GCA_002249905.1
- Location
- NNAY01001903.1:4162-5727[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 4.1e-28 2.1e-24 84.9 10.5 1 47 24 70 24 70 0.99 2 3 0.52 2.7e+03 -1.8 0.2 37 47 82 92 81 92 0.82 3 3 4.1e-28 2.1e-24 84.9 10.5 1 47 112 158 112 158 0.99
Sequence Information
- Coding Sequence
- atgcaccAACAACAATCGCAGCATGTTTTACCGGCATTTTTTTTGAGAGCAACTGCGGAACGTTATCAACGTACACCTAAATGTGCAAGATGCCGAAATCATGGCGTAGTATCAGCTTTAAAAGGTCATAAAAGGTACTGCCGATGGCGTGACTGTATATGTGCAAAATGTACACTTATTGCTGAAAGACAACGAGTTATGGCAGCACAGaATATGTCttacttattaaaatttactccAGGTATCAACGctagacaaaaaaaaatgcaccAACAACAATCGCAGCATGTTTTACCGGCATTTTTTTTGAGAGCAACTGCGGAACGTTATCAACGTACACCTAAATGTGCAAGATGCCGAAATCATGGCGTAGTATCAGCTTTAAAAGGTCATAAAAGGTACTGCCGATGGCGTGACTGTATATGTGCAAAATGTACACTTATTGCTGAAAGACAACGAGTTATGGCAGCACAGatCATTATTAGTAATTTGAATGCTAGTGTAAGAGAAACGATCCTCATATGA
- Protein Sequence
- MHQQQSQHVLPAFFLRATAERYQRTPKCARCRNHGVVSALKGHKRYCRWRDCICAKCTLIAERQRVMAAQNMSYLLKFTPGINARQKKMHQQQSQHVLPAFFLRATAERYQRTPKCARCRNHGVVSALKGHKRYCRWRDCICAKCTLIAERQRVMAAQIIISNLNASVRETILI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -