Tpra001110.1
Basic Information
- Insect
- Tricholauxania praeusta
- Gene Symbol
- nfxl1
- Assembly
- GCA_949775025.1
- Location
- OX459028.1:21130210-21139016[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 2 4.4e+04 -8.1 6.4 15 19 171 175 170 175 0.82 2 19 0.13 2.9e+03 -0.3 0.4 4 10 206 212 205 212 0.95 3 19 3.1e-08 0.00068 20.9 17.0 1 19 220 237 220 237 0.99 4 19 2 4.4e+04 -4.9 2.3 6 10 263 267 263 267 0.96 5 19 0.00026 5.7 8.3 13.5 1 18 273 291 273 292 0.91 6 19 5.1e-07 0.011 17.0 8.8 1 19 327 345 327 345 0.99 7 19 1.1e-05 0.23 12.8 6.0 1 18 380 397 380 398 0.96 8 19 0.3 6.7e+03 -1.5 0.7 1 5 407 411 407 416 0.75 9 19 2 4.4e+04 -5.0 2.3 5 10 421 426 421 426 0.91 10 19 1.2e-06 0.027 15.7 15.7 1 18 432 449 432 450 0.98 11 19 6.3e-08 0.0014 19.9 13.1 3 18 461 476 453 477 0.85 12 19 0.32 7e+03 -1.6 1.2 5 10 504 509 504 509 0.95 13 19 0.011 2.4e+02 3.1 6.7 10 18 523 531 521 532 0.91 14 19 0.00018 3.9 8.8 7.5 1 11 544 553 544 554 0.95 15 19 0.46 1e+04 -2.1 0.8 6 10 614 618 613 618 0.89 16 19 0.00024 5.4 8.4 3.0 1 12 624 635 624 635 0.92 17 19 0.00011 2.3 9.5 16.5 3 18 664 679 663 680 0.91 18 19 2 4.4e+04 -6.8 3.1 10 13 687 690 686 690 0.68 19 19 1e-05 0.22 12.8 8.6 1 15 731 744 731 750 0.94
Sequence Information
- Coding Sequence
- ATGCCGATTACTAAAACTTCCACCAATACAAAATCCATTGAGAATGAAAAAAGCAAAGTTAAGATACAAAACAACACTACGGATGAGAAATTTGAAGAAATCAAAAGCAGAAATATGGAGAATGTGAAAAAGTTGGTAGAGGGCTATGAATCAAGTTCTGATGAAGAGGATCTGGATGAAGGAAACATTTTAGAAAAGCTCTATAGCAACTATAAAATTAATGCTAGTGgacagcaacagcaactttTATCCAAAACATCAAGTTTCCTTGAGAATGTACTACAATCTGGAGCAGCTACTTGCCTCATCTGTATTGCAAGCGTAAAACGTGCAGATGCAATTTGGTCATGTCGAcattgtttctgtttttttcacttaaactgCATAAAACGTTGGGCTAACGATAGCATTGCCCAGATAAAATCGAATCAGCAGCATTCAGACCAAGGTTATTACAATAATTTAGGTACATTTGTACCACCAAAAAAGCCAAAAAGTCCGAAATGGTGTTGTCCGCAATGTCGAACGGATTATGAACCAAATCAGCGACCTTTAAACTATGAGTGTTTTTGTGGAAAAGAACTAAATCCGTCTCAACAAGCCTGGTTAGTACCACATTCATGTGGTGAAATATGTGGCAAGAACTTGCAGCCGGAATGTGGTCACAAATGTTTGTTGCTGTGTCATCCAGGACCATGTCCACCTTGTCCTCAAAATGTGTACACGTCATGTATTTGTGGAAAGTCTAAACCAAAATCCGTGAGATGTTTTCAAAAGACTTGGATGTGTGAGGAAAAGTGTAGCAAAATTTTATCTTGTCAAAAGCACCGATGTGAGCAGATATGTCACGAGAAAACAAAATGTCCACCCTGCAATCGTACCAGTAATCAAAAATGTATTTGCAAAAGTGAAGAAACGACTCGAAGTTGCTCAGAATTACTGTGGCAGTGTAAAAATATTTGTAGTCGGATGTATCCATGTGGTATTCATTTTTGCAAGAGAATTTGTCACTCCGATTCATGTGGTGAGTGTCCGCTGGGATTGCCACGTTTCTGTCCATGTGGAAAAACAaaaaaaattggacCTTGTGATGAAACAATTGACTCTTGCGGTGATACGTGTCAGAAAAAATTGCCATGTGGACTTCACTTTTGTACGCAGAGATGTCATAAAGCCGACTGTAGTTTGTGTTTGATTATTACCAAAAAGAAATGTCGCTGTGGAAAACATGAGAAAGAATTACCATGTTGGAAATCATTTACATGTGAAACTAAATGCAAACAAATTCGTGAATGCGGAAAACATGCATGCAACAAAAAGtgttgTGATGGACAATGTTCACCCTGCGACAAAATTTGTGGAAAAAGCCTATCATGCAAAAAGCATAAATGCAAATCTATTTGCCACGATGGTCCTTGTTATCCTTGTGATCAAACTGCACAAATCAATTGTCGTTGCGGTACTACAACGAAAAAAGTTCATTGTGGTAGTGAGCGTACGGCTCGCGTGACATGTAATGAACCGTGCAGaATTCCATCAAAATGTCATCATTTAAATCGACATCGCTGTCACAAAAATGAATGTCCACCATGTAATCAAAAATGTGGTCTTGTTAATGATACCAGTGCATGTGGCCATACATGTGAAGCTAAGTGTCATGCAGCAGTAAAAGTGTTTTCAAATTCATCAGTACAGAAGAAAACAGTATGGgattataactcaaaaaactTTGAGTTCAAAAAATTACCACATCCACAATGTGAAGTAAAAGTTATGGTTACTTGCATTGGTGGTCATGAAAATGCAGAATGGTCTTGCTGGAATTCAAAACCAACATCATGTCAACGTATATGTAATCGTTTATTAAAATGCAGCTGGCATAAATGTGAACTAATATGCCATTCAGTGCCGGATCAAAGCAATATGAAGGAACAAGACGGATGCGCAAGTTGCTCGGAAGGTTGTGCAATTCCACGTCCTCCAGGTTGTACCCATCCATGTCAGCGCCCTTGTCATATCCAACCATGCCAACCGTGTAACGCTATCATTAAAACAAAATGCCATTGTGGACTCACACAGGTCGTATTTTTATGTTCTGAATATAATAGTGAAAATATAGCTGCAGATGAACTTGCAATGATCCAACAAAGCAAATTAAGTTGTGGTGGACGTTGTGTAAAAACtTATCCATGTGGCCATCGCTGTACAATGATATGTCATGCTGGAAAATGTCTCAACCCAGATATGTGTCGCAAAAAGATTCGCATTTTTTGTGTCTGCAAACGTATAAAAATAGACATTTCCTGTGATAAGTATCGTACCGGACTTCAAACACTACAATGTGATGAATATTGTGAGCAAACGCGTGCTATCACCGAAGAGCTTAAAAAACAGGAGTCGGATAAACAAAAGcttttagaaaaagaaaaaaaccgtaTTGAACTTGAACAATACCAAAAATTATTTGCCAAAAAGAAATATAAGGAACGTAAAGTTGTTACAGAGAGGTCTAAAAAAGCcttaaattggaaaataatttctatttatGCTGGAGTTGCATTTGCTATGATAATAGCTGTCGGTGTGGCGCTTTATGAAGGAAATGTTTAA
- Protein Sequence
- MPITKTSTNTKSIENEKSKVKIQNNTTDEKFEEIKSRNMENVKKLVEGYESSSDEEDLDEGNILEKLYSNYKINASGQQQQLLSKTSSFLENVLQSGAATCLICIASVKRADAIWSCRHCFCFFHLNCIKRWANDSIAQIKSNQQHSDQGYYNNLGTFVPPKKPKSPKWCCPQCRTDYEPNQRPLNYECFCGKELNPSQQAWLVPHSCGEICGKNLQPECGHKCLLLCHPGPCPPCPQNVYTSCICGKSKPKSVRCFQKTWMCEEKCSKILSCQKHRCEQICHEKTKCPPCNRTSNQKCICKSEETTRSCSELLWQCKNICSRMYPCGIHFCKRICHSDSCGECPLGLPRFCPCGKTKKIGPCDETIDSCGDTCQKKLPCGLHFCTQRCHKADCSLCLIITKKKCRCGKHEKELPCWKSFTCETKCKQIRECGKHACNKKCCDGQCSPCDKICGKSLSCKKHKCKSICHDGPCYPCDQTAQINCRCGTTTKKVHCGSERTARVTCNEPCRIPSKCHHLNRHRCHKNECPPCNQKCGLVNDTSACGHTCEAKCHAAVKVFSNSSVQKKTVWDYNSKNFEFKKLPHPQCEVKVMVTCIGGHENAEWSCWNSKPTSCQRICNRLLKCSWHKCELICHSVPDQSNMKEQDGCASCSEGCAIPRPPGCTHPCQRPCHIQPCQPCNAIIKTKCHCGLTQVVFLCSEYNSENIAADELAMIQQSKLSCGGRCVKTYPCGHRCTMICHAGKCLNPDMCRKKIRIFCVCKRIKIDISCDKYRTGLQTLQCDEYCEQTRAITEELKKQESDKQKLLEKEKNRIELEQYQKLFAKKKYKERKVVTERSKKALNWKIISIYAGVAFAMIIAVGVALYEGNV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00972743; iTF_00258546;
- 90% Identity
- iTF_00972743;
- 80% Identity
- -