Mpla007713.1
Basic Information
- Insect
- Meiosimyza platycephala
- Gene Symbol
- nfxl1
- Assembly
- GCA_963662105.1
- Location
- OY759208.1:121100777-121113005[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 2 3.2e+04 -8.1 6.4 15 19 145 149 144 149 0.82 2 20 0.087 1.4e+03 0.2 0.4 4 10 180 186 179 186 0.96 3 20 3e-08 0.00048 20.9 17.0 1 19 194 211 194 211 0.99 4 20 2 3.2e+04 -4.3 0.8 6 10 237 241 237 242 0.93 5 20 0.00025 4 8.4 13.5 1 18 247 265 247 266 0.91 6 20 6.9e-07 0.011 16.5 9.2 1 19 301 319 301 319 0.99 7 20 1.4e-07 0.0023 18.7 7.8 1 18 354 371 354 372 0.96 8 20 0.29 4.7e+03 -1.4 0.7 1 5 381 385 381 390 0.75 9 20 2 3.2e+04 -5.0 2.3 5 10 395 400 395 400 0.91 10 20 1.2e-06 0.019 15.8 15.7 1 18 406 423 406 424 0.98 11 20 6.1e-08 0.00098 19.9 13.1 3 18 435 450 427 451 0.85 12 20 0.31 4.9e+03 -1.5 1.2 5 10 478 483 478 483 0.95 13 20 0.011 1.7e+02 3.1 6.7 10 18 497 505 495 506 0.91 14 20 0.00017 2.8 8.9 7.5 1 11 518 527 518 528 0.95 15 20 0.45 7.1e+03 -2.0 0.8 6 10 588 592 587 592 0.89 16 20 0.00013 2.1 9.3 2.8 1 12 598 609 598 609 0.92 17 20 4.3e-05 0.69 10.8 15.7 3 18 638 653 637 654 0.94 18 20 1.3e-05 0.21 12.4 9.0 1 15 705 718 705 724 0.94 19 20 1.1 1.8e+04 -3.3 2.3 5 10 784 789 784 794 0.78 20 20 2 3.2e+04 -10.1 7.1 12 18 825 831 825 832 0.74
Sequence Information
- Coding Sequence
- ATGGATgagaaatttaaagaaatcaaaagcAGAAATATGGAGAATGTGAAAAAGTTAGTGGAGGGCTATGTATCAAGTTCCGATGAAGAGGATCTGGATGAAGGAAACATTTTAGATAAGCTCTATAGCAACTATAAAGTTAATGCTAGtggacaacaacagcaacttttATCCAAAACATCAAGTTTCCTTGAAAATGTACTACAATCTGGAGCAGCTACTTGCCTCATCTGTATTGCAAGCGTGAAACGTGCAGATGCAATTTGGTCATGTCGGcattgtttctgtttttttcacttaaactGCATAAAACGTTGGGCTAACGATAGTATTGCCCAGATAAAATCGAATCAGCAGCATTCAGACCAAGGTTATTACAATAATTTAGGTACATTTGTACCACCAAAAAAGCCAAAAAGTCCGAAATGGTGTTGTCCGCAATGCCGAACGGATTATGAACCAAATCAGCGACCTTTAAACTATGAGTGTTTTTGTGGGAAAGAACTCAATCCCTCTCAACAAGCCTGGTTAGTACCACATTCATGCGGTGAATTATGTGGCAAGAACTTGCAGCCGGAGTGTGGTCACAAATGTTTGTTGCTCTGTCATCCAGGACCATGTCCACCTTGTCCTCAAAATGTGTACACGTCATGCGTTTGTGGAAAGTCTAAACCAAAATCCGTGAGATGTTTTCAAAAGACATGGATGTGTGAAGAAATGTGTAGCAAAATTCTATCTTGCCAAAAGCACCGATGTGAACAGATATGTCACGAGAAAACAAAATGTCCACCCTGCAATCGTACTAGTaatcaaaaatgtatttgtaaAAGTGAAGAAGCGATGCGTAGTTGCTCAGAATTATTGTGGCAGTGTAAAACTATTTGTAGTCGGAAGTATCCATGTGGTATTCATTTCTGCAAGAAAATTTGTCACTCTGATTCATGTGGTGAGTGTCCGCTGGGATTGCCACGTTCCTGTCCTTGTGGGAAAACGaaaaaaatcggTCCTTGTGATGAAACAATTGACTCTTGCGGTGATACATGTCAGAAAAAATTGCCATGTGGACTTCACTTTTGTACGCAGAGATGTCATAAAGGCGACTGTAGTTTGtgTTTGATTATTACCAAAAAGAAGTGTCGCTGTGGAAAACATGAAAAAGAATTGCCATGTTGGAAATCATTTACTTGCGAAactaaatgtaaacaaattcgTGAATGCGGAAAACATGCATGTAACAAAAAGtgctgTGATGGGCAATGTTCACCCTGTGacaaaatttgtggaaaaagCCTTTCTTGCAAAAAGCATAAATGCAAATCCATTTGCCATGACGGTCCTTGTTATCCGTGTGATCAGACTGCACAAATTAACTGTCGTTGCGGtagtacaacaaaaaaagttcattgtGGTAGTGAGCGTACGGCTCGCGTAACATGTAATGAACCGTGCAGaattCCATCAAAATGTCATCATTTAAATCGACATCGCTGTCACAAGAATGAATGTCCACCATGTAATCAAAAATGTGACCTTTTTAATGATACCAGTGCATGTGGCCATACATGTGAAGCTAAGTGCCATGCAGCAGTAAAAGTGTTTTTAAATTCATCGGCGCAAAAGAAAACAGTATGGGattataactcaaaaagtTTTGAGTTCAAAAAATTCCCACATCCACAATGTGAAATAAAAGTTATGGTTACTTGCATTGGTGGTCATGAAAATGCGGAATGGCCTTGCTGGAATTCAAAACCAACATCATGTCAACGTATATGTAATCGTTTATTAAAATGCAGCTGGCATAGATGTGAACTGGTATGTCATTCAGTGCCGGATAAAAGCAATATGAAGGAACAAGACGGATGCGCAAGTTGCTCAAAAGGTTGTGAAATTCCACGCCCTCCAGGTTGTATACATCCATGTCAGCGTCCTTGTCATATCCAACCATGCCAACCGTGTAACGCTATCATTAAGACAAAATGCTACTGCGAACTCACACAGGTCGTGTTTTTATGTTCAGAATATAATAGTAAATATATAGCTGCAGAAGAATTTGCTATGATCCAACAAAGTAAATTAAGTTGTGGTGGACGTTGCATAAAAACTTATCCATGTGGCCATCGCTGTACAATGATATGCCATGCTGGAAAATGTCTCAATCCGGAAATGTGTCGCAAAAAAATTCGCATTTTTTGTGTCTGTAAACGTATAAAAATAGACATTTCCTGTGATAAGTACCGTGCCGGACTTCAAACACTACAATGCGATGAATATTTGAAACGATTTGCTGGTATTACCCTTATCATCCTCCTTGATGCGCTAAAAAGCGGCAATGAGACTCCAGCATCCAAATGCAACAAAACATGTGGCGGCTCTTGTGATGATGTTCCGGACACAGAAGCAGCAGCGGCGGCGGCGGCTGAACATGAAGAGGCTGCCTGCAACAAGATGGGTGTTGCTGCAGTAGATGATGAAggcaattgctgttgttgtagttgcgaTGACGCCACTAATTTAATGACCATCTGA
- Protein Sequence
- MDEKFKEIKSRNMENVKKLVEGYVSSSDEEDLDEGNILDKLYSNYKVNASGQQQQLLSKTSSFLENVLQSGAATCLICIASVKRADAIWSCRHCFCFFHLNCIKRWANDSIAQIKSNQQHSDQGYYNNLGTFVPPKKPKSPKWCCPQCRTDYEPNQRPLNYECFCGKELNPSQQAWLVPHSCGELCGKNLQPECGHKCLLLCHPGPCPPCPQNVYTSCVCGKSKPKSVRCFQKTWMCEEMCSKILSCQKHRCEQICHEKTKCPPCNRTSNQKCICKSEEAMRSCSELLWQCKTICSRKYPCGIHFCKKICHSDSCGECPLGLPRSCPCGKTKKIGPCDETIDSCGDTCQKKLPCGLHFCTQRCHKGDCSLCLIITKKKCRCGKHEKELPCWKSFTCETKCKQIRECGKHACNKKCCDGQCSPCDKICGKSLSCKKHKCKSICHDGPCYPCDQTAQINCRCGSTTKKVHCGSERTARVTCNEPCRIPSKCHHLNRHRCHKNECPPCNQKCDLFNDTSACGHTCEAKCHAAVKVFLNSSAQKKTVWDYNSKSFEFKKFPHPQCEIKVMVTCIGGHENAEWPCWNSKPTSCQRICNRLLKCSWHRCELVCHSVPDKSNMKEQDGCASCSKGCEIPRPPGCIHPCQRPCHIQPCQPCNAIIKTKCYCELTQVVFLCSEYNSKYIAAEEFAMIQQSKLSCGGRCIKTYPCGHRCTMICHAGKCLNPEMCRKKIRIFCVCKRIKIDISCDKYRAGLQTLQCDEYLKRFAGITLIILLDALKSGNETPASKCNKTCGGSCDDVPDTEAAAAAAAEHEEAACNKMGVAAVDDEGNCCCCSCDDATNLMTI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01486830;
- 90% Identity
- iTF_01486830;
- 80% Identity
- -