Basic Information

Insect: Tricholauxania praeusta
Gene Symbol: -
Assembly: GCA_949775025.1
Location: OX459031.1:102029013-102039800[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.00013 0.017 16.8 0.8 1 23 121 143 121 143 0.98

2 15 2.3 3e+02 3.4 2.2 1 23 149 172 149 172 0.91

3 15 3.4e-05 0.0045 18.6 1.4 2 23 398 419 397 419 0.97

4 15 0.73 95 5.0 3.5 1 23 425 448 425 448 0.94

5 15 0.24 31 6.5 0.5 1 21 543 563 543 564 0.87

6 15 0.00062 0.081 14.7 1.3 3 23 683 703 682 703 0.96

7 15 0.011 1.4 10.8 0.8 1 23 709 732 709 732 0.95

8 15 0.072 9.3 8.2 0.0 1 23 767 790 767 790 0.91

9 15 0.065 8.4 8.3 1.5 1 23 804 827 804 827 0.96

10 15 0.0014 0.18 13.5 0.3 1 23 870 893 870 893 0.97

11 15 0.0037 0.49 12.2 3.6 2 23 907 928 906 928 0.96

12 15 1.8e-05 0.0023 19.5 2.8 1 23 933 955 933 955 0.97

13 15 0.00041 0.054 15.2 6.3 1 23 961 984 961 984 0.92

14 15 7.3 9.6e+02 1.8 4.4 1 23 989 1013 989 1013 0.95

15 15 0.32 42 6.1 2.7 1 23 1020 1043 1020 1043 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.00013	0.017	16.8	0.8	1	23	121	143	121	143	0.98
2	15	2.3	3e+02	3.4	2.2	1	23	149	172	149	172	0.91
3	15	3.4e-05	0.0045	18.6	1.4	2	23	398	419	397	419	0.97
4	15	0.73	95	5.0	3.5	1	23	425	448	425	448	0.94
5	15	0.24	31	6.5	0.5	1	21	543	563	543	564	0.87
6	15	0.00062	0.081	14.7	1.3	3	23	683	703	682	703	0.96
7	15	0.011	1.4	10.8	0.8	1	23	709	732	709	732	0.95
8	15	0.072	9.3	8.2	0.0	1	23	767	790	767	790	0.91
9	15	0.065	8.4	8.3	1.5	1	23	804	827	804	827	0.96
10	15	0.0014	0.18	13.5	0.3	1	23	870	893	870	893	0.97
11	15	0.0037	0.49	12.2	3.6	2	23	907	928	906	928	0.96
12	15	1.8e-05	0.0023	19.5	2.8	1	23	933	955	933	955	0.97
13	15	0.00041	0.054	15.2	6.3	1	23	961	984	961	984	0.92
14	15	7.3	9.6e+02	1.8	4.4	1	23	989	1013	989	1013	0.95
15	15	0.32	42	6.1	2.7	1	23	1020	1043	1020	1043	0.93

Sequence Information

Coding Sequence: ATGGACGACAATATCGATTATAAACTCGTGTGTCGAACGTGTTTAGCATCGGATGCTGAATTCTACAAATTGGACGCAAAAGTTTTTGTCGATGATGACGAAAAGGTCAGCTTTCAGGAATGTCTAAAATATTGTACAAAATTGGAAGATGTGGCGCAGTTTCCCATATACATATGCACCGAGTGTAGTACCGCACTACAAGTggcatataattttatgaaaaatgcacTGGAAGCACATGAAATTTTACGTAAAAAATTATGTCTGACCCAAACAATATCGGGAACGCGTGCTAACGGACAATTAGCGGGCGTTAGCAATTTATCAGAGGGACAATTTTCATGCGATCGAAAAATTAGTTTTCGTTGTAAAATCTGTGGGGAAAAGGTGGAAACAAAGAAATCTCTCAAGGAACATGTAAAACTTCATTTGGATATAATTTCATACAATTGTGAACAATGTcgtttcaaatcaaaaaagcGAGGTACTTTAAGTGACCATTACTCATTTGCCCATGGACTGCTGGCTAGCCGGGAACAATTAAAACCGAAAACTGTAACCAACCAATTATCTTCAGAGACGCCGATTATTAGTGCTACTACAGATAATTTACATATAGATTCAactaattttcatataattccaCAAACTGCAACACAACCTCAACCGATAAGCGTCGCACAATTTTTAGCACCTACAGAATTACAACAAATTCCATTAGGATTGGCTAGGGTTATTGAAACAGAGCCGAGTTCGTCTGGCGCACAATTAATCACAACCAGTGGATTGGAAAACTTTgggaatgaaattaatttgggAAATGAGTTCACAATTGGAAATGAGTACGTTGTTATGCAAGATGGCACTGTGGAGGAAGTTATGGGCAACGgggTTGTGATCAAATATATCAACACTGCTGATGGTGCTGTTGCGCTAGATAATGGAATATTCATAAACAATATCATGATTCAACCTAATGACGGTGCAGTAAACGTGAATGAAGGGTGTAATATGGTTAACGGTTTAGTTGACTCTGATTTAATAAACATGACACAAGGTGAAATAAATATGGGTGTATTAGAAAATGCTGGAAATATGGATATAGATGATATTATAGTAGAAGAAAATATGGAACCTGAAACTACCGAAgCACCTGCACCAATAACGGAAGATGTTTCAATGAGACAGTTACGTTGCAAAATGTGTAAATCGACGTTCTCAAATCAGGAAGATTTAAAGGAGCATATGCTATCACATAATGAAATTCCACACTTCTTTTGtgataattgtgacttttatacgtttttcaaaattgatttaacACAGCATTATAAAACCAAACATCAAATGCAGCCAACCAATAAACAACTACagcctaaaaataaagttaattttaatgtaCCTAAAGGTGCGaaaaatgtatatgtatgtgatTTATGTATCTATGATACCCCAGTTAAGACCATACTGCGAAGACACTACTTAAGTAAACATCAAATAGAAGCAACTGAAGTACAATTACGCCCAATGAAAGTTACTCCGCCCGgTAACGATACCGATGAAGATAGCTTAAATGAATCAAGAGTAGGTAGAAATGTGAAGGTGAAACGTGATTTTCCAAATGGATATAGTTGTCCTAAATGCAGAAGAGTATTTTTCTGGGAGGCTAAGCTTAAAGAACATTATAAACTGCTGTGCACAGAAAACAATACAGCACAAACAAGCTCGACATTAGATAAAAATGTGGACGTTGAAAGTCTAATAATGGGCACAGAATTGcgaacagcaacaacatcaattttaaatcaaatggaTGAAGGTGGTGTCGGTAGGGTGCCGGCAGATGCCATACCACAAATAGTTGAAACTGATAGTATTATCGATAACATAATGGAATATGATTTTAACGGTGATGCAATATTTGAAGACGATGATGAAGAAGAAGATGATGAAGAATTTAAAGACCTTATATTGACCACTGATGATGAACAGGAATATATGAAGGATAGTGGCGGCAGTATGGGTGCTATGCGGCAAAATCCATTTTGTGttcaatgtaataaaaaatttgcaacataCTATCAGTTTGAAAATCATATGTTTGTGCATAGAGgcTTGGCACCCTATCGGTGTGAAATGTGCACAAACTTGTACAATACTAAGCGGGACCTGATACGACATTACCAAGCTGTACACAAAAAAATACCGACGCGAGATATGATACAAGCAAAAGGGGATAAAGCAATAGATGCAGCaggagataaaatttttaataccttAAAATCGAATGTTGTTTCATTTATGTGTGCAAAGTGTCCGTATGAAGTTGCCGATATAGATAATTTAAGAACGCATTTAGGTCTCATGCATGGCGTTGCTGATGATCATTATATGTTACAAAAACTGCCACACGAGTGTCCAAAATGTATTCGCACATTTGATTCCAGTTTACGTCTTAGTCGCCATATCGAACGGAACCATTCCTCTCTATCTGTTTGCCATgcgaaaaaggatttttttgaaaacgttaCTTGCAAGCGATGTGgagTAACACTTCTCCTTGCTGAAGTCAAAGCTCATGAAATTTTATGCAATCGAGCAACTGAATACGAGTGTTTAATTTGTAGCTTAGTGTTTGATTCAAGAACTAAACTTATAGCACATAAGAATATGCAACATAACAGTGATGGTATGAAGATCTCAAATAGTGACAATTTAATTTGTCATTTTTGTAATAACAAATATAGAAATGAAGATTCGTTGAGACAACATCTTAAGCGACACACAGGACGCAATCATCACTGTGATGAATGTCCGAAAACATTTGTTAGCAAATCCGAATTGGAAGATCATAAACTAACACATAGCGGCGAATATCCCCACAATTGTAAAGATTGTGATAAGAAATTTCGTTATACGTATCATCTGAATCGTCACAGAGATCAGGTACATTCCGCAAGAGCTTATGCCTGCAAGGCGAAGAACTGTTGTCGTCGATTTCATACACTTAGGGAATTGAAAGATCATGCATTAACGCATGGTGCTGTCATAATTGTACATGCTTGCCAATTTTGCTTTGGAGAGTTCGAATCCAGTGATCActTACGTATACATGCTAAAAATACTCATATGGTCGAACTATCCGAGGCAGAGCTCAATGAAAGTCGTGtagataaaattgaaaagaaattttcaaaaaataatgtcACTTCGAATATCAGTTTGCTTCGTCACAATGTACACCATCCAAATTCAATTGCTGATGATGATATAGACTTAGATGTGGAATAG
Protein Sequence: MDDNIDYKLVCRTCLASDAEFYKLDAKVFVDDDEKVSFQECLKYCTKLEDVAQFPIYICTECSTALQVAYNFMKNALEAHEILRKKLCLTQTISGTRANGQLAGVSNLSEGQFSCDRKISFRCKICGEKVETKKSLKEHVKLHLDIISYNCEQCRFKSKKRGTLSDHYSFAHGLLASREQLKPKTVTNQLSSETPIISATTDNLHIDSTNFHIIPQTATQPQPISVAQFLAPTELQQIPLGLARVIETEPSSSGAQLITTSGLENFGNEINLGNEFTIGNEYVVMQDGTVEEVMGNGVVIKYINTADGAVALDNGIFINNIMIQPNDGAVNVNEGCNMVNGLVDSDLINMTQGEINMGVLENAGNMDIDDIIVEENMEPETTEAPAPITEDVSMRQLRCKMCKSTFSNQEDLKEHMLSHNEIPHFFCDNCDFYTFFKIDLTQHYKTKHQMQPTNKQLQPKNKVNFNVPKGAKNVYVCDLCIYDTPVKTILRRHYLSKHQIEATEVQLRPMKVTPPGNDTDEDSLNESRVGRNVKVKRDFPNGYSCPKCRRVFFWEAKLKEHYKLLCTENNTAQTSSTLDKNVDVESLIMGTELRTATTSILNQMDEGGVGRVPADAIPQIVETDSIIDNIMEYDFNGDAIFEDDDEEEDDEEFKDLILTTDDEQEYMKDSGGSMGAMRQNPFCVQCNKKFATYYQFENHMFVHRGLAPYRCEMCTNLYNTKRDLIRHYQAVHKKIPTRDMIQAKGDKAIDAAGDKIFNTLKSNVVSFMCAKCPYEVADIDNLRTHLGLMHGVADDHYMLQKLPHECPKCIRTFDSSLRLSRHIERNHSSLSVCHAKKDFFENVTCKRCGVTLLLAEVKAHEILCNRATEYECLICSLVFDSRTKLIAHKNMQHNSDGMKISNSDNLICHFCNNKYRNEDSLRQHLKRHTGRNHHCDECPKTFVSKSELEDHKLTHSGEYPHNCKDCDKKFRYTYHLNRHRDQVHSARAYACKAKNCCRRFHTLRELKDHALTHGAVIIVHACQFCFGEFESSDHLRIHAKNTHMVELSEAELNESRVDKIEKKFSKNNVTSNISLLRHNVHHPNSIADDDIDLDVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00972516; iTF_00258329;
90% Identity: iTF_00972516;
80% Identity: -