Basic Information

Insect: Calliopum simillimum
Gene Symbol: -
Assembly: GCA_951812925.1
Location: OX638370.1:22379618-22388729[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 5.3e-05 0.0063 18.1 1.2 1 23 131 153 131 153 0.98

2 14 7.5 9e+02 1.9 1.2 1 23 159 182 159 182 0.90

3 14 3.6e-05 0.0044 18.6 1.2 2 23 414 435 413 435 0.97

4 14 0.8 96 5.0 3.5 1 23 441 464 441 464 0.94

5 14 0.23 28 6.7 1.0 1 22 559 580 559 580 0.89

6 14 0.00068 0.082 14.6 1.3 3 23 709 729 708 729 0.96

7 14 0.0097 1.2 11.0 1.0 1 23 735 758 735 758 0.96

8 14 0.075 9 8.2 0.0 1 23 793 816 793 816 0.91

9 14 0.007 0.84 11.5 0.6 1 23 824 847 824 847 0.97

10 14 0.013 1.5 10.6 0.3 1 23 890 913 890 913 0.96

11 14 0.0011 0.14 13.9 1.5 2 23 927 948 926 948 0.96

12 14 3.5e-05 0.0043 18.7 1.2 1 23 953 975 953 975 0.98

13 14 0.00027 0.033 15.9 6.2 1 23 981 1004 981 1004 0.92

14 14 0.021 2.5 10.0 3.0 1 23 1040 1063 1040 1063 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	5.3e-05	0.0063	18.1	1.2	1	23	131	153	131	153	0.98
2	14	7.5	9e+02	1.9	1.2	1	23	159	182	159	182	0.90
3	14	3.6e-05	0.0044	18.6	1.2	2	23	414	435	413	435	0.97
4	14	0.8	96	5.0	3.5	1	23	441	464	441	464	0.94
5	14	0.23	28	6.7	1.0	1	22	559	580	559	580	0.89
6	14	0.00068	0.082	14.6	1.3	3	23	709	729	708	729	0.96
7	14	0.0097	1.2	11.0	1.0	1	23	735	758	735	758	0.96
8	14	0.075	9	8.2	0.0	1	23	793	816	793	816	0.91
9	14	0.007	0.84	11.5	0.6	1	23	824	847	824	847	0.97
10	14	0.013	1.5	10.6	0.3	1	23	890	913	890	913	0.96
11	14	0.0011	0.14	13.9	1.5	2	23	927	948	926	948	0.96
12	14	3.5e-05	0.0043	18.7	1.2	1	23	953	975	953	975	0.98
13	14	0.00027	0.033	15.9	6.2	1	23	981	1004	981	1004	0.92
14	14	0.021	2.5	10.0	3.0	1	23	1040	1063	1040	1063	0.93

Sequence Information

Coding Sequence: aTGGACGGCTACATCGATTACAAACTGGTGTGTCGAACGTGTCTAGCATCGGATGCTGAATTCTATAAATTGGACGCAAAAGTTTTTGTCGATGACGACGAAAAGGTCAGCTTTCAGGAATGCCTAAAATACTGTACAAAATTGGATAATTTGCCGCAGTTTCCCATATACATCTGTACGGATTGTAGTACGGCACTTCAAGTTGCAtataatttcatgaaaaacgcATTGGAGGCACATGaaattttgcgtaaaaaattatGTCCGTCTCTGCCATCACAATCACAAATACCGTCGGCAGTTGGAATGCGTGCTAACGGACAATTAGCAGGAGGAGGCGTTGGCAATTTAGCAGAGGGGCAACAATTGCCATGCGATCGAAATATTAGTTTCCGTTGTAAAATCTGTGGTGAAAAAGTGAGAACAAAGAAATCACTTAAGGAACATGTGAAACTTCATTTGGATATAATTTCATACAATTGTGAACTATGTcagttcaaaacaaaaaagcgaAGTATTTTAAGTGAGCATTACTCACTTGTGCATGGACAACATGCTAGCCGGGAACAACTAAAGCCAAGAACAGCAGTCAATCAAATATACACAGAGGCACCGACGCTTATTAGTTCAACTACTATGGAAAATGTGCAAACCGATGCAAATAATTTCCATATAATTCCACAAACTCAACAGATCAATGTCGCACAATACTTAGCACCTACAAATATACAACAAATGCCATTAGGAATGGCTAGGGTTATTAAAACGGAGCAAATACAGTCTGGTGCACAGTTGATTCCAGCCAACGAGTTGCAAAATTTTGGCGATGAAATTAATTTGGGGAATGAATTCACTATTGGAAATGAGTATGTTGTAATGCAGGATGGTACAGTGCAGGAAGTCATGGGCAATGGAGTTGTCATTAAGTATATCAACACCGCAGATGGTGCTGTAGCGTTAGATAATGGCATATTTATAAACAATATCATGCTACAACCGAATGACAGTGTAGTGAATGTAAATGATGGTGGCCATATGGTTAACGGCGATGTTGACTCTGGTTTAATAGATATGGCGCAAGGTGAGCTAAATATGGGCGTATTAGAAAATGCTGGTAATATGGATATAGATGATATAATTGTAGAAGAAAATGTGGAACATGAAACTACTGAAgTCATTAGTAATTTCGTAACACCTACACAACCACCAATAATTGAAGAAGCTTTGATGAGGCAGATACGTTGCAAAATGtgtaaatcaacattttcaaatcaAGAAGACTTAAAGGAACATATGTTGTCACATAATGAAATACCACATTTCTTTTGTGATAATTGCgacttttatacatttttcaagATTGATTTAACACAGCATTATAAAACTAAGCATCAAACGCAGCCAACCAATAAACAACTGCAGcctaaaaataaagttaattttaatgTGCCCAAAGGAGCTAAAAATGTTTACGTTTGTGATTTATGTATTTATGATACACCGGTTAAGACCATATTGCGAAGGCACTATCTAAGTAAACATCAAATTGAGGCAACTGAAGTTCAATTACGTCCAATGAAAGTTACTCCGCCTTGTAACGATACAGACGAAGATAGCTCCAATGAAACAAGAATAGGTAGAAATGTAAAAGTAAAACGGGATTTTCCTAATGGATATAGTTGTCCTAAATGCAGAAGAGTATTTTTCTGGGAGAATAAGCTGAAAGAACATTATAAAACGCAGTGCACACAACAAATTAATACAGCGCAACAAACACGCGCAACATTAGATTGTAACccaacaacattttccaaaaatgtggATGTTGAGAGTCTTATAATGGGCACAGAATTGCGaacggcaacagcaacaattctCAATCAAATGGATGAATGTGATGGTGTCGCCAGAGTACCGGCAGATGCAATACCACAAATTGTTGAAACCGATAGTATTGTTGATAACATAATGGATTATGATTTTAATGGTGATGCAATATTTGAAGACGATGATGAAGAAGAAGATGATGATGAATTTAAAGATCTAATATTAACCACTGATGATGAGCAGGAGTATATGAAAGACTGTGGCGGCAGTGTAGGTGTTATGCGACAAAATCCATTTTGCGtgcaatgcaataaaaagtttgcaACATATTATCAATTTGAAAATCATATGTTTGTTCATAGAggTTTGGCACCCTATCGTTGTGAAATGTGCACAAACTTGTACAATACTAAGCGGGACCTGATACGACATTACAAAGCTGTGCACAAAGTAATACCTACGCGTGATATGATACAAGCAAAAGGCGATAAGGcGATAGATACAACAGGATTTCAAATTATCAACACCTCAAAAACGAATGTGGTTTCGTTTATGTGTGCAAAATGCCCATATGAAGTTGTTGACGTCGATAATTTAAGGACGCATTTAGGTCTTATGCATGGCGTTGCAGATGAACTGCCATACGAGTGTCCAAAATGCATTCGCACTTTTGATTCCAATTTACGTTTAAATCGTCATATCGAACGTAACCATTCCTCTTTATCCGTTTGCCATGCGAAGaaggaaataaatgaaagtattATTTGCAAGCGATGTGgAATGACACTTCTCTCTACTGAAATTAAGGCGCATGATGTTTTATGCAATCGTGCAACTGAATACGAATGTCTACTTTGTAGTTTAGTATTTGATTCAAGAACAAAACTTATAGCTCATAATAATATGCAACACAACAGTGATGGCATTAAGATTTCAAAAACGGACAATTTAATTTGCAACTTTTGTAATAACACATATAGAAATGAGGAGTCGTTGAAACAACATCTTAAGCGGCATACGGGACGCATTCATCGCTGTGATGAATGTCCGAAATCATACGTCAGTCAAAAAGAATTAGAAGATCATAAATTAACACATAGTGGGGAATATCCGCACAGCTGTAAAGATTGTGATAAGAAATTTCGTTATACGTATCATCTAAATCGTCACAGAGATCAGGCGCATTCTGCCAGAGCTTATGCCTGTATAGGTAAAAACTGCTGTCGTCGATTTCATACAATTAAAGAATTAAAAGATCATGCATTAACGCATGGTGCTATTATAATTGTACACGCTTGCCAATTTTGCTTCGAAGAGTTTGAAACCAGTGATCActTACGCGTACACGCTAAAAATACTCATATGGTTGAACTTACCGAAGCAGAGCTCAAAGAAAGTCGTGTggataaattagaaaataaattctcaaaaaataatataatttcgaATATCAGTTTGCTTCGCCATAATACAGCACATCATACAAATTCAATTGCTGATGATGATATAGATGTGGAATAG
Protein Sequence: MDGYIDYKLVCRTCLASDAEFYKLDAKVFVDDDEKVSFQECLKYCTKLDNLPQFPIYICTDCSTALQVAYNFMKNALEAHEILRKKLCPSLPSQSQIPSAVGMRANGQLAGGGVGNLAEGQQLPCDRNISFRCKICGEKVRTKKSLKEHVKLHLDIISYNCELCQFKTKKRSILSEHYSLVHGQHASREQLKPRTAVNQIYTEAPTLISSTTMENVQTDANNFHIIPQTQQINVAQYLAPTNIQQMPLGMARVIKTEQIQSGAQLIPANELQNFGDEINLGNEFTIGNEYVVMQDGTVQEVMGNGVVIKYINTADGAVALDNGIFINNIMLQPNDSVVNVNDGGHMVNGDVDSGLIDMAQGELNMGVLENAGNMDIDDIIVEENVEHETTEVISNFVTPTQPPIIEEALMRQIRCKMCKSTFSNQEDLKEHMLSHNEIPHFFCDNCDFYTFFKIDLTQHYKTKHQTQPTNKQLQPKNKVNFNVPKGAKNVYVCDLCIYDTPVKTILRRHYLSKHQIEATEVQLRPMKVTPPCNDTDEDSSNETRIGRNVKVKRDFPNGYSCPKCRRVFFWENKLKEHYKTQCTQQINTAQQTRATLDCNPTTFSKNVDVESLIMGTELRTATATILNQMDECDGVARVPADAIPQIVETDSIVDNIMDYDFNGDAIFEDDDEEEDDDEFKDLILTTDDEQEYMKDCGGSVGVMRQNPFCVQCNKKFATYYQFENHMFVHRGLAPYRCEMCTNLYNTKRDLIRHYKAVHKVIPTRDMIQAKGDKAIDTTGFQIINTSKTNVVSFMCAKCPYEVVDVDNLRTHLGLMHGVADELPYECPKCIRTFDSNLRLNRHIERNHSSLSVCHAKKEINESIICKRCGMTLLSTEIKAHDVLCNRATEYECLLCSLVFDSRTKLIAHNNMQHNSDGIKISKTDNLICNFCNNTYRNEESLKQHLKRHTGRIHRCDECPKSYVSQKELEDHKLTHSGEYPHSCKDCDKKFRYTYHLNRHRDQAHSARAYACIGKNCCRRFHTIKELKDHALTHGAIIIVHACQFCFEEFETSDHLRVHAKNTHMVELTEAELKESRVDKLENKFSKNNIISNISLLRHNTAHHTNSIADDDIDVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01486636;
90% Identity: -
80% Identity: -