Basic Information

Insect: Tricholauxania praeusta
Gene Symbol: -
Assembly: GCA_949775025.1
Location: OX459030.1:120282142-120290297[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.0061 0.79 11.5 0.6 2 23 72 93 71 93 0.96

2 15 0.0029 0.37 12.6 2.6 1 23 99 122 99 122 0.91

3 15 0.068 8.8 8.2 0.1 3 23 127 149 125 149 0.93

4 15 0.019 2.5 10.0 0.2 2 20 158 176 157 178 0.94

5 15 5.4e-05 0.0071 18.0 3.2 1 23 186 208 186 208 0.98

6 15 0.013 1.7 10.5 2.7 1 23 214 236 214 236 0.97

7 15 0.00035 0.045 15.5 2.6 1 23 242 264 242 264 0.95

8 15 2.1 2.7e+02 3.6 2.6 2 23 719 741 718 741 0.95

9 15 0.099 13 7.7 1.7 1 23 766 788 766 788 0.96

10 15 0.053 7 8.6 3.5 1 23 796 820 796 820 0.97

11 15 0.00025 0.033 15.9 0.2 2 21 863 882 862 883 0.94

12 15 0.0014 0.18 13.5 0.1 1 23 891 913 891 913 0.97

13 15 1.1e-06 0.00014 23.3 2.3 1 23 919 942 919 942 0.98

14 15 0.0001 0.013 17.1 1.4 1 23 948 970 948 970 0.98

15 15 0.00028 0.037 15.7 2.2 1 23 976 998 976 998 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.0061	0.79	11.5	0.6	2	23	72	93	71	93	0.96
2	15	0.0029	0.37	12.6	2.6	1	23	99	122	99	122	0.91
3	15	0.068	8.8	8.2	0.1	3	23	127	149	125	149	0.93
4	15	0.019	2.5	10.0	0.2	2	20	158	176	157	178	0.94
5	15	5.4e-05	0.0071	18.0	3.2	1	23	186	208	186	208	0.98
6	15	0.013	1.7	10.5	2.7	1	23	214	236	214	236	0.97
7	15	0.00035	0.045	15.5	2.6	1	23	242	264	242	264	0.95
8	15	2.1	2.7e+02	3.6	2.6	2	23	719	741	718	741	0.95
9	15	0.099	13	7.7	1.7	1	23	766	788	766	788	0.96
10	15	0.053	7	8.6	3.5	1	23	796	820	796	820	0.97
11	15	0.00025	0.033	15.9	0.2	2	21	863	882	862	883	0.94
12	15	0.0014	0.18	13.5	0.1	1	23	891	913	891	913	0.97
13	15	1.1e-06	0.00014	23.3	2.3	1	23	919	942	919	942	0.98
14	15	0.0001	0.013	17.1	1.4	1	23	948	970	948	970	0.98
15	15	0.00028	0.037	15.7	2.2	1	23	976	998	976	998	0.95

Sequence Information

Coding Sequence: ATGGAACTAGCGAAATCTTTTATATACCGTGTGCAGAAGACAATTGTCAGCCAGCCAACTGTGGCTGACACATCACCCAAAGCATCCACATCGGCTATTGCCGCGCCTACTTCTTTAGATGCCGTTGAGACACCTACCGCCACTGCCACACAGGCACAGGCAGCAATACAAGCTATGATGGTACAACTCACTACGGATGGTGTACCCAAACTACACTGTCCTATCTGCAATAAAGCACTTGTTTCACTTAACGGCTATGTGAAGCATCTGAAAAAACATGAACCGCCTGGTGGTTTTTTCTGTCGGTATTGTGATGAGCGCTTCTGCTCTGACGATGAACTTAAAAAACATCGTGATGCAGTGCACACTACCATAGCATGTCGTATTTGCAAAGAGATTACCTTCACAAATGAGGAGGATTACCGCGATCATATACGTGTTGTGCACGAAGGTATTGATCGTGAAATTCTTAAGTGTGAAAAATGTGGTGCCGAATATAAAACGCTGGAACCGTTTAAAAGACATCAAGAGAATCAATGTGGCACCATTAAGCCACATAAGTGTGACGAATGTGAAATGGCCTTCTACACTAAGTACAATCTGAAGCAACACAAAATAACACATTCGGGAGAGCGACGTTTCTGCTGCAGCTACTGTGGCAAGAACTTTCTACAAAAGGGACGTCTGGTTGAGCATGAACGTTCACATACTGGTGAAAAGCCCTATAAATGTGATaTCTGTGGTAAATGCTTTGCACATCGTGAGAGCATTGTTACACATAATTCCATACACACCGGTATCAAATTGGTTGAATGTCCTTGTTGTTTGTCGCGTTTTTCTTGTTATTCGAATTTGCTGAAGCATCGGCGCTCACGGCCGGATACTTGTGGACTGCCTGAATATAATCCACCCAAAAATCGTATACGCACACGCAAACCAAGaaTTCCACCTACAGTAAACCCTACTTCAGAAATCAAGGttagtaatttaaataaaattattaaacctGCTGATAAAGTACACGAGAAAAAAGGACGTCGTAAAAATATAGATACAATTGATATtgatgaaaaagaaaagaaacctaaaaaaaaacgcGGTCCACGTCCACGCAGCAAACGTAAGCAGGCTGAAACTGAATCAGCATCAGATATTTCAAGTGAAGATGATTCTGCCTATGAAGACGATAACCAGGAATTTATAAGAACAATGCCTAAGCGTGCTACACGTGATGCagcattaaaaaatgtgaaatcaaCATTACTTGATGAAATGACTGATACCACCTCAGCAGTAAAGACAATTAAATCCGATTTACCAATTATTCCTGCTGCTGATGTTATTGCACCACCATCAGAAGATGATACCAACGTTGTTTCTGTGCCATTAAAAACTGAGCAGAACCCAGTTTGGCACGATGATTCCGATTCAGCAGAAGACTATcccgattttgatccacccGATAGTGATAGTGATGGCAATAGTAATAATGAGAAGGATTTTAAGGTACCTTCACCTAAGATTAACATCAagaaggaaaatgttgaagactTAAGTGTTAATGATTTCGAATATACCAACGCTAACGATTATCTGGAGGCTGAAATTAATGTTAAATGTGAAGacgatcaaaatatttttaatgaaaaagatAAATTGCTGCATTGTTTACTTAATGATGAAGAAAATTCATTGGAATTTATAAGCAAGAAGGGTTCTAAAGAGGACTCCTCAAAATTGCCCTCCTTTGATATTGTCAAAGTAGAAAGTTTATTAGATGAAAGCGAGGTTGTTTACGTAAAAGATGAGGAACAAATGGAGGACATGCTAAATGTTCAAGAGATTTCTAACGAAATTTCCGGTTGTAAAATTGTGCATGATGATGTTAAAGAAAGCTATCCGGATCTCAGCGAAGAAAATTCCGTTAGAGTTACACGGAAGTCCAAATCACTTAAGCACATCAGACAAAAACGCGAATCGTCTGAGGAAATCGAGCTCGAACTCGAACGTGAGCGAAAACCAAGAGGTAAATATCGTAAACGTGGAGAAAAATCGATTGGAATGGATCGAAGCAAAGGACCCAAACGAATGGCGAAACTTTCACAGAATGAGGTGAAGGAACGccttaaattaatgaaaaaagaaaaatcatggcAGTGTCCACATTGCGTTAAACTTTATCATATACGCAAACCATTTGAAAAGCACTTACGTAATGAGCACAAACTGAAAGATGAAGAACTAAGAAAAATTCTCAAAGAAGAAGAGGATGTCGGTGTCGTGGATGAGGACATATTTAAGTGTCAcatctgtaaaaaaatttatttaatggaaAAACGTTTAATTGCACACATAAAATTACATGGTGACGATGGCTCCCTTGTACACAAATGTCCTTGCTACTGTTCCATTTACTTTTCTACCAAGGAAGAGGCGCAAGAACATGCACGTAAAATGCACAAAGATCTAATATATTGTGAAGCATGTGATAGATATATGACTGGTCATGATGCGCTCAAAAATCATAAGCATCATCATATCGACGGCAATACTACACCACTTCATCGTAATAATCAGCGTAATTTGGTTTGTGATAAATGTGGGAAAAAATATGCCAGTCGCACCTCACTCACGGATCATGTGCGCTCCGATTGTGGACGTATACCAATTTATCCGTGCAATATTTGCGGTAAACGCCTTACTACAGCCGGTATACTcaaaacacatcttttattGCATAAAGATGATACGCCATATCAGTGCGATCAATGTGGTAAAACATTTAAAGTGAAAGCGCAGTACAAGACACACATTAAGACACGTCATACGGAAAATAAACCTTTCAAATGCCATCTCTGTCCTAAGGAGTACCCCTACCGTGAAAGTCTACTCACCCATATGACTGTTCATACTGGCATAAAGCGTTTCCTTTGCAACGGTTGTGGCAAACGTTTTACTTGCATTTCGAATTTACAAGCTCATCGTAAAGTACATGCAGATACTTGTGGCGTATTACCGCTGAATGCAAGAGCTACACAATATATGGGCGTTCAAAAAGGTAATCTACTTATGGGCGCTAAACCAGAAGCTGGACTTGATTACAAGGAAACAAATACACTGATTGCTAGGGAAGTAATTGATCGTGATCAGCCAATGGCGCAAGAGCTCAACTATCCTTCTGAGCCATCAGCGCCGATGGTGACGCAACCACTGAACTACGCGCAACCACCGACACATTTACTATTACCACACTTGATTATGCCACAGTATACAGAAGATTCACTTTCGTCGTTCTAA
Protein Sequence: MELAKSFIYRVQKTIVSQPTVADTSPKASTSAIAAPTSLDAVETPTATATQAQAAIQAMMVQLTTDGVPKLHCPICNKALVSLNGYVKHLKKHEPPGGFFCRYCDERFCSDDELKKHRDAVHTTIACRICKEITFTNEEDYRDHIRVVHEGIDREILKCEKCGAEYKTLEPFKRHQENQCGTIKPHKCDECEMAFYTKYNLKQHKITHSGERRFCCSYCGKNFLQKGRLVEHERSHTGEKPYKCDICGKCFAHRESIVTHNSIHTGIKLVECPCCLSRFSCYSNLLKHRRSRPDTCGLPEYNPPKNRIRTRKPRIPPTVNPTSEIKVSNLNKIIKPADKVHEKKGRRKNIDTIDIDEKEKKPKKKRGPRPRSKRKQAETESASDISSEDDSAYEDDNQEFIRTMPKRATRDAALKNVKSTLLDEMTDTTSAVKTIKSDLPIIPAADVIAPPSEDDTNVVSVPLKTEQNPVWHDDSDSAEDYPDFDPPDSDSDGNSNNEKDFKVPSPKINIKKENVEDLSVNDFEYTNANDYLEAEINVKCEDDQNIFNEKDKLLHCLLNDEENSLEFISKKGSKEDSSKLPSFDIVKVESLLDESEVVYVKDEEQMEDMLNVQEISNEISGCKIVHDDVKESYPDLSEENSVRVTRKSKSLKHIRQKRESSEEIELELERERKPRGKYRKRGEKSIGMDRSKGPKRMAKLSQNEVKERLKLMKKEKSWQCPHCVKLYHIRKPFEKHLRNEHKLKDEELRKILKEEEDVGVVDEDIFKCHICKKIYLMEKRLIAHIKLHGDDGSLVHKCPCYCSIYFSTKEEAQEHARKMHKDLIYCEACDRYMTGHDALKNHKHHHIDGNTTPLHRNNQRNLVCDKCGKKYASRTSLTDHVRSDCGRIPIYPCNICGKRLTTAGILKTHLLLHKDDTPYQCDQCGKTFKVKAQYKTHIKTRHTENKPFKCHLCPKEYPYRESLLTHMTVHTGIKRFLCNGCGKRFTCISNLQAHRKVHADTCGVLPLNARATQYMGVQKGNLLMGAKPEAGLDYKETNTLIAREVIDRDQPMAQELNYPSEPSAPMVTQPLNYAQPPTHLLLPHLIMPQYTEDSLSSF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00258246; iTF_00972462;
90% Identity: iTF_00258246;
80% Identity: -