Basic Information

Insect: Calliopum simillimum
Gene Symbol: -
Assembly: GCA_951812925.1
Location: OX638369.1:118205358-118211686[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.0065 0.78 11.6 0.6 2 23 56 77 55 77 0.96

2 15 0.0092 1.1 11.1 2.6 1 23 83 106 83 106 0.91

3 15 0.071 8.5 8.3 0.1 3 23 111 133 109 133 0.93

4 15 0.02 2.4 10.0 0.2 2 20 142 160 141 162 0.94

5 15 5.8e-05 0.007 18.0 3.2 1 23 170 192 170 192 0.98

6 15 0.014 1.7 10.5 2.7 1 23 198 220 198 220 0.97

7 15 0.00037 0.044 15.5 2.6 1 23 226 248 226 248 0.95

8 15 1.2 1.5e+02 4.4 2.6 2 23 702 724 701 724 0.96

9 15 0.11 13 7.7 1.7 1 23 749 771 749 771 0.96

10 15 0.093 11 7.9 2.7 1 23 779 803 779 803 0.97

11 15 0.00027 0.032 15.9 0.2 2 21 846 865 845 866 0.94

12 15 0.0015 0.18 13.6 0.1 1 23 874 896 874 896 0.97

13 15 1.1e-06 0.00014 23.4 2.3 1 23 902 925 902 925 0.98

14 15 0.00011 0.013 17.2 1.4 1 23 931 953 931 953 0.98

15 15 0.0003 0.036 15.8 2.2 1 23 959 981 959 981 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.0065	0.78	11.6	0.6	2	23	56	77	55	77	0.96
2	15	0.0092	1.1	11.1	2.6	1	23	83	106	83	106	0.91
3	15	0.071	8.5	8.3	0.1	3	23	111	133	109	133	0.93
4	15	0.02	2.4	10.0	0.2	2	20	142	160	141	162	0.94
5	15	5.8e-05	0.007	18.0	3.2	1	23	170	192	170	192	0.98
6	15	0.014	1.7	10.5	2.7	1	23	198	220	198	220	0.97
7	15	0.00037	0.044	15.5	2.6	1	23	226	248	226	248	0.95
8	15	1.2	1.5e+02	4.4	2.6	2	23	702	724	701	724	0.96
9	15	0.11	13	7.7	1.7	1	23	749	771	749	771	0.96
10	15	0.093	11	7.9	2.7	1	23	779	803	779	803	0.97
11	15	0.00027	0.032	15.9	0.2	2	21	846	865	845	866	0.94
12	15	0.0015	0.18	13.6	0.1	1	23	874	896	874	896	0.97
13	15	1.1e-06	0.00014	23.4	2.3	1	23	902	925	902	925	0.98
14	15	0.00011	0.013	17.2	1.4	1	23	931	953	931	953	0.98
15	15	0.0003	0.036	15.8	2.2	1	23	959	981	959	981	0.95

Sequence Information

Coding Sequence: ATGCCATTAATAATTTCAGAAACATCACCCAAAGCATCTACATCTGGCGTAGCCACCACCACTACTTCAACAGCTGCCGTCGATGATGCAACATCAACCAGACAAGCCCAAGCagctatacaagctatgatGGTACAGCTAACTACTGATGGCGTTCCAAAATTACATTGTCCTATCTGCAATAAAGCACTTGTATCACTTAATGGCTATGtcaagcatttgaaaaaacatGAACCTCCTGGTGGTTTCTTCTGTCGCTATTGTGATGCACGCTTTTGCTCTGATGATGAGCTTAAGAAACATCGTGATGAAGTGCACACGACCATAGCATGTCGCATTTGTAAAGAGATAACATTCACAAATGAGGAGGATTATCGCGAACATATACGCGTTGTACACGAAGGTATTGATCGTGAAATTCTCAAGTGTGAAAAATGTGGTGCCGAATATAAAACGCTGGAACCGTTTAAAAGGCATCAGGAGAATCAATGTGGTACCATTAAACCGCATAAATGTGATGAATGTGAAATGGCCTTCTACACAAAGTACAATCTGAAGCAGCACAAAATAACACATTCTGGAGAGCGACGTTTCTGTTGTAGTTACTGTGGTAAGAATTTTTTACAAAAGGGGCGACTGGTCGAACATGAACGTTCACATACTGGTGAAAAACCCTATAAATGTGATatCTGTGGAAAATGTTTTGCGCATCGTGAGAGCATTGTTACACATAATTCCATACACACTGGTATCAAATTGGTTGAATGTCCTTGTTGTTTGTCACGTTTTTCTTGCTATTCGAATCTGCTGAAGCATCGACGTTCACGGCCAGATACTTGTGGACTGCCTGAATATAATCCACCTAAAAATCGCATACGAACACGCAAACCAAGAATTCCACCTACAATAAATCCTACTTCAGAGATCAAAGttagtaatttaaataaaattattaaacccgCTGATAAAATACATGAGAAGAAAGGACGTCGCAAAAATATAGATATAATTGATAttgatgaaaaagaaaaaaagactaaaAGAAAACGTGGTCCTCCACGCAAACGTAAGCAAGCTGAAACTGAAGAATCCGAAAGTTCAAGTACAGATGATTCTCCCTTTGAGAATGAAAAGCAGCAATTTACAAGAACAATGCCTAAGCGTGCGACACGCGATGtagcaataaaaaatgtaaaatcaaCGTTACTTGATGAAAACGCTGACAATTCCGAACTAAAAACCATTAAAACCGATTTACCAGTTACTGCTGCTGCCGATAATATTTCAGCAGCAACACCAAAATCAGATGATACAAACGACGCTGTTTCTTTGCCATTGAAAATCGAACACAACGCTGTTTGGAATGATGATTCTGATTCAGCAGAAGACTATCCTGATTTCGATCCACCCGATAGCGATAGTGATGGCAATAGTAATTGTGAATTGAAGTTACCATCACCTAAGGTTAACATTAAAAAGGAGAATATTGAAGATTTAAGTGCAAATGATTTTGAATACTCCAATGCTAATGACTATCTGGAAGCTGAATTGAGCGTTAAATGTGAAGATGATCagaatatttttaatgaaaaggaTAAATTATTGCATTGTTTACTAAATGATGATGAAAATTCCatggaatattcaaataagaaaGACTCTAAAGATAACTCATCTAAATTGCCCTCATTTGATGTTGTCAAAgtagaaagtttacttgatgagaGTGAAGTTGTTTACGTGAAAGATGAGGAACAAATGGAGGATATGTTAAATGTTCAAGagATTTCTAATCAAATTTCTGATAGCAAAACTGTACTTGATGATGTTAAGGAGGACTGTCCAGATTTGAATGAAGAAAATTCCGTTAGACTTACACGTAAGGCTAAGGCAAATAAACGCATTCGACAAAAACGAGAATCATCTGAAGAAATCGAGCTTGAAGTCGAGCGAGAGCGTGAACGCAAGCCAAGAGGTAAATATCGTAAACGTGGAGAAAAACCGACTGAAATGGATAAAAGCAAAGGACCCAGGCGAATGGCAAAACTTTCACAGAATGAGGTGAAGGAACGccttaaattaatgaaaaaagaaaaatcatggcAGTGTCCGCATTGCGTTAAACTCTATCATATACGTAAACCATTTGAAAAGCATTTACGTAGTGAGCATAAACTAAAGGATGAAGAACTAAGAAAAATTCTCAAAGAAGAAGAGGATGTCGGTGTGGTGGATGAGGATATATTTAAATGTCATATTTGTAAGAAGATATATTTAATGGAAAAACGTTTAATTGCACACATTAAATTACATGgtGAGGATGGTTCTCTCATACACAAATGCCCCTGTTACTGTTCCATTTACTTCGCTACCAAGGAGGAAGCACAAGAACATGCACGTAAAATGCATAAAGATCTTATATATTGTGAAGCATGTGATAGATATATGACTGGACATGATGCGTTAAAAAACCATAAACACCATCATGTGGATGGCAATACTACACCACTTCATCGTAATAATCAACGGAATTTAGTTTGTGATAAATGTGGCAAGAAATATGCCAGTCGCACCTCACTTACGGATCATGTGCGCTCAGATTGTGGACGTATACCGATTTATCCGTGCAATATTTGCGGTAAACGTCTTACAACAGCAGGTATACTTAAAACACATCTTTTATTACATAAAGAGGATACGCCATATCAGTGTGATCAATGTGGTAAAACATTTAAAGTTAAGGCACAATACAAGACACACATTAAAACGCGTCATACGGAAAATAAACCATTTAAATGCCATCTCTGCCCTAAAGAATATCCTTACCGCGAAAGCTTGCTCACACATATGACTGTTCACACTGGCATTAAGCGTTTTCTTTGCAATGGTTGCGGCAAACGTTTTACTTGCATTTCAAATTTACAAGCTCATCGTAAAGTACATGCGGATAGTTGTGGCGTATTACCGCTAAATGCTAAGGCCACACAATATATGGGCGTTCAAAAAGGCAATCTACTTATGGGCGCTAAACCAGAAGCCGGACTTGATTACAAAGAGACAAATACGTTGATTGCCAGAGAAGTAATTGATCGTGATTTGCCTATGGCACAAGAGCTAAATTATCCTTCGGAGCCATCAGCGCCTATGGTGACACAGCCATTAAACTATACACAACCACCGACACATTTGCTGTTGCCTCACTTGATTATGCCACAATATACTGAAGATTCACTTTCGTCGTATTAA
Protein Sequence: MPLIISETSPKASTSGVATTTTSTAAVDDATSTRQAQAAIQAMMVQLTTDGVPKLHCPICNKALVSLNGYVKHLKKHEPPGGFFCRYCDARFCSDDELKKHRDEVHTTIACRICKEITFTNEEDYREHIRVVHEGIDREILKCEKCGAEYKTLEPFKRHQENQCGTIKPHKCDECEMAFYTKYNLKQHKITHSGERRFCCSYCGKNFLQKGRLVEHERSHTGEKPYKCDICGKCFAHRESIVTHNSIHTGIKLVECPCCLSRFSCYSNLLKHRRSRPDTCGLPEYNPPKNRIRTRKPRIPPTINPTSEIKVSNLNKIIKPADKIHEKKGRRKNIDIIDIDEKEKKTKRKRGPPRKRKQAETEESESSSTDDSPFENEKQQFTRTMPKRATRDVAIKNVKSTLLDENADNSELKTIKTDLPVTAAADNISAATPKSDDTNDAVSLPLKIEHNAVWNDDSDSAEDYPDFDPPDSDSDGNSNCELKLPSPKVNIKKENIEDLSANDFEYSNANDYLEAELSVKCEDDQNIFNEKDKLLHCLLNDDENSMEYSNKKDSKDNSSKLPSFDVVKVESLLDESEVVYVKDEEQMEDMLNVQEISNQISDSKTVLDDVKEDCPDLNEENSVRLTRKAKANKRIRQKRESSEEIELEVERERERKPRGKYRKRGEKPTEMDKSKGPRRMAKLSQNEVKERLKLMKKEKSWQCPHCVKLYHIRKPFEKHLRSEHKLKDEELRKILKEEEDVGVVDEDIFKCHICKKIYLMEKRLIAHIKLHGEDGSLIHKCPCYCSIYFATKEEAQEHARKMHKDLIYCEACDRYMTGHDALKNHKHHHVDGNTTPLHRNNQRNLVCDKCGKKYASRTSLTDHVRSDCGRIPIYPCNICGKRLTTAGILKTHLLLHKEDTPYQCDQCGKTFKVKAQYKTHIKTRHTENKPFKCHLCPKEYPYRESLLTHMTVHTGIKRFLCNGCGKRFTCISNLQAHRKVHADSCGVLPLNAKATQYMGVQKGNLLMGAKPEAGLDYKETNTLIAREVIDRDLPMAQELNYPSEPSAPMVTQPLNYTQPPTHLLLPHLIMPQYTEDSLSSY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01486547;
90% Identity: iTF_00972462; iTF_01486547;
80% Identity: -