Basic Information

Insect: Tricholauxania praeusta
Gene Symbol: -
Assembly: GCA_949775025.1
Location: OX459028.1:129401399-129416670[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 2.1e-07 2.8e-05 25.5 1.6 2 23 149 170 149 170 0.97

2 9 1.3e-06 0.00017 23.1 1.6 1 23 176 198 176 198 0.98

3 9 2.6e-07 3.4e-05 25.3 0.7 1 23 204 226 204 226 0.98

4 9 7.4e-06 0.00097 20.7 0.5 4 23 237 256 232 257 0.92

5 9 0.00067 0.088 14.5 4.9 1 23 262 284 262 284 0.96

6 9 3.8e-05 0.0049 18.5 3.6 1 23 290 313 290 313 0.98

7 9 0.0074 0.96 11.3 2.3 1 23 319 341 319 341 0.97

8 9 4.5e-06 0.00059 21.4 1.1 1 23 346 368 346 368 0.98

9 9 0.00084 0.11 14.2 0.3 2 23 375 399 374 399 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	2.1e-07	2.8e-05	25.5	1.6	2	23	149	170	149	170	0.97
2	9	1.3e-06	0.00017	23.1	1.6	1	23	176	198	176	198	0.98
3	9	2.6e-07	3.4e-05	25.3	0.7	1	23	204	226	204	226	0.98
4	9	7.4e-06	0.00097	20.7	0.5	4	23	237	256	232	257	0.92
5	9	0.00067	0.088	14.5	4.9	1	23	262	284	262	284	0.96
6	9	3.8e-05	0.0049	18.5	3.6	1	23	290	313	290	313	0.98
7	9	0.0074	0.96	11.3	2.3	1	23	319	341	319	341	0.97
8	9	4.5e-06	0.00059	21.4	1.1	1	23	346	368	346	368	0.98
9	9	0.00084	0.11	14.2	0.3	2	23	375	399	374	399	0.95

Sequence Information

Coding Sequence: ATGGAAAGCATTTGTAGGCTTTGCTTTCAACCAGCAGCGTTGTTTCAAGTACCCGGTTACAATATCCCCACATGTGTTAAGTGCTCGGAACATTTGACTACCAACGGCTTCTACCAGTCGGTGCGCCAAGACGGCACAACCTTGGCCACAACTTCCGCAGCAGCCGTTGTAAATCAATTGACTAACGGTAATAACTTAacgcagcaacagcaacagcagcagcaacaacatcaacagcagcagcaacaacaacagcaacagctacaATCAACAAGTTCTTCCGAAAATCTACAATCACAAGACGATTCTGAAGATATAAATAAACAGCGAATTGGTTCGATCCAATCCAATCAAAACGGTGTGAAAAAAACCGAAACCATGTCCTTTGATTTGGAGAAAACCATACAGAATCTAGACGTGGACTTAATATTCAATGAGGAGGGCTCTTGTCCTCTATGCAACAAAACTTTTTCGCGTAAATCTTCGCTCTTAACTCATATCCGAAATCATGCTGCTGAACGAAAGTTTGTTTGTAACTTCTGTCACAAGggCTTTACACAAGCAGCCAATTTGCGTAACCACGAGAGGATTCATACTAATGATCGTCCATACGTTTGCGTCGATTGCGGCAAAACATTTACTCAGataACAAACTTGAATAATCACCGTCGCTTGCACACTGGAGAACGGCCATTTGTATGCATTGAACCAGAATGTGGACGCTCGTTTGCGCAGGTCACAAACCTTAACAACCACATGAAAACTCATCACAAAGTGCAGCAATATTGTTGCAATCAATGTCCGAAAAAGTTTACACAAGTCACTTCCTTAAATCAACATCTGCATGCACATGCCGGCATTACCGGCTACTATTGTCCACGTTGCCCGGAAAAGACATTCAAGCAGCAATCGCAATTACACACTCATATGAAGTCACATGGATTGGCGTTTCCATTTGAATGTTCAAAATGTGATGAGAAATTCCTTCAGCAAGCACATCTGGATCAGCACAATAAAATgcatgatgaatttaaatttaaatgcaacatTTGTCCATCATCATTTAATCAGGAATCGTTGCTCAAAAAACATGTGCAACGTCATGTCGAAGGAAGATACTTGACCTGTCCCGTGGCCAATTGTAATGAAGCATTTGCAGTGCGTCAACATTTATCAAAGCACTTATTAACAAGCCATTCACATGACGAGTTGCCGCCACCGAAACGCTCCAAAAAGTCTATCACATTACAGCCGCCACAACAACCTGTGGCAATGATTGGACAACCGCTTTCAATACAACATACAACGGGTCAACGCGGTCGTccaccgaaaaataaaaaagcccaAAATGCAGCCGCCAACTCCtctgcaataaaaattgaagtaCACGAACCTTTGCATAATCAACATATAATCAGTAATGCGAGTGGCTTATCCATACAGCAGCAGATCAACCAAcatatgcagcagcagcagcaattacagcaacaacaccaacaacagcagcagcaacatcaaatGGCAATTGGTGGAAATAACGTTAAAGTACGTTTCATACAAACGaaataa
Protein Sequence: MESICRLCFQPAALFQVPGYNIPTCVKCSEHLTTNGFYQSVRQDGTTLATTSAAAVVNQLTNGNNLTQQQQQQQQQHQQQQQQQQQQLQSTSSSENLQSQDDSEDINKQRIGSIQSNQNGVKKTETMSFDLEKTIQNLDVDLIFNEEGSCPLCNKTFSRKSSLLTHIRNHAAERKFVCNFCHKGFTQAANLRNHERIHTNDRPYVCVDCGKTFTQITNLNNHRRLHTGERPFVCIEPECGRSFAQVTNLNNHMKTHHKVQQYCCNQCPKKFTQVTSLNQHLHAHAGITGYYCPRCPEKTFKQQSQLHTHMKSHGLAFPFECSKCDEKFLQQAHLDQHNKMHDEFKFKCNICPSSFNQESLLKKHVQRHVEGRYLTCPVANCNEAFAVRQHLSKHLLTSHSHDELPPPKRSKKSITLQPPQQPVAMIGQPLSIQHTTGQRGRPPKNKKAQNAAANSSAIKIEVHEPLHNQHIISNASGLSIQQQINQHMQQQQQLQQQHQQQQQQHQMAIGGNNVKVRFIQTK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00624929;
90% Identity: iTF_00972431; iTF_00258210; iTF_01181345; iTF_01415231;
80% Identity: -