Basic Information

Gene Symbol
Camta1
Assembly
GCA_949775025.1
Location
OX459031.1:7260132-7275698[-]

Transcription Factor Domain

TF Family
CG-1
Domain
CG-1 domain
PFAM
PF03859
TF Group
Unclassified Structure
Description
CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 4.4e-45 9.7e-41 139.4 0.5 9 116 73 178 67 178 0.97
2 4 0.8 1.8e+04 -3.3 2.0 41 76 317 355 301 386 0.64
3 4 0.33 7.2e+03 -2.0 2.2 33 90 356 412 340 418 0.71
4 4 0.99 2.2e+04 -3.6 3.0 59 107 528 575 526 579 0.77

Sequence Information

Coding Sequence
atgccagtttcatctctattcgaaaaacaaacctctaaaaaaaacacccagtacaatGGAATGATTAGCACATCTGTGTTGTGGCAACTTCTACTTAAGCTAAAGAAGAAATCGCACGCTTTGCCGGCGGCGGCATTACTTCTTATGGCAAATACTATGTGGCATTTACCACAAACACGATATAAACGTGCATACcaaagtagcagcagcagcgagCAAATGGAAATCGCTGCGATTCTTATCAGCTTCGATAGACACAATGAATGGCAGTCTAAAGAAGTCAAAACAAGACCTAAAAGTGGCTCATTATTGTTGTATTCTCGCAAAAAAGTGCGTTACCGCCGGGATGGTTACTGCTGGAAGAAACGCAAAGATGGTAAAACAACGCGTGAAgatcatatgaaattaaaagtaCAAGGAACGGAAtGCATCTATGGTTGTTATGTTCATTCTGCTATTTTGCCAACATTTCATCGCAGATGTTACTGGTTGTTACagAATCCTGATATTGTGTTGGTACATTATCTTAATGTTCCCTATCCGGATGATAACAAAATGGCAGTCATTGCGCCGAGCATCACACTTTGGGGCGATaagaaagaatggacgaaggaggaGTTGGTTAGTCAGCTGAAGCCAATGTTATCGAGCGTTACCTCAGATGATGATTCTGATTCGGGAAATGACATCGAAATATCGACTGCTGAAACGGTTGAGTCCATAGTTTGTCAGTTAATGGAAAAGCAGCGTTTATCACGTCAGGCTGCATTGGTAAAGCAATTGGATTGTGGTTGTGCAGATTCATCATGTGTTGATGGCAAGTCTTGTTCCCATCCTGTAATGCGTCGCACTGGACTTTTAAAGAGTGTTTCGGATAAACGTGGAAATTTCAGTGATAATTATAACCAAGCAACGTCAACGACTCCAAATGTGGTCATTGGACCGAAGctTTATTCACGTTGGCCTGATCGACGTCAACGTGATGATAATCATCATTACCAGCAACAGCCACATCATGCTCATCAGCAACTGACTCAGGAGGGTGCGATCAAATTCCAAATTATACAGCCGCAACACAACGaacagcatcagcagcagcagcaacatcatcaaCTTCATCAGCAACAACCACAGCATTACAGACAACATAATAATAACACACATGTCACACCTCATCATCAACTATTTATCaatagaaataatttaattatacagcatcaccaacagcaacaacatacaaattttaatcaaGCAAATACAGCAGCATCGGCAACAACAGCATCCTCAAATGTTGTATCATCAACAGTATCAAACaatcaaaataatcaaataaatttacaacGATTTGTAGCCAATcataacaacagcaataataataataatttacaaataaataataatcgcTTGCAAATTGCTAAGACAACAATTACAGCAACACCAGCAACACCGACAGCATTAACAGAAGCAGGCAGTCTGAGCAGCGAACTAATTGGAAATCAAAACCACATTTCTGCAAATTCAAATATAAACTCTAATAAAATAAACCGCAACAGCAACCAATTAACATTGCCAGCAccccaacaacaacagcaacagcagcaacatcaacaacaacaacaaaatttagatgcaaatactataaataataacaattacaattatAATACTTCCgctcagcagcagcagcaacaagaactctataaaatgcaacaacaacacaaacatTCAACAAcgaaagatataaaaattgacttCCAATCCACACAGCAGCACACCACCTCTTCCTCTTCGAATTCTGTGCAACCCATGTGCATGTCACCTGAACATCAACCTTCAACACCAACACATGGCAGCAACGCAAGCCAAAACAACAGCCACCCTCTGTTAGCAcaaggtggtggtggtggtggtagcAGTACACTTGCAAATAttacttcttcttcttcctcaCCAGCAGCGGCAGCCGCCTCAAactcatcatcgtcatcatcatcatcttgtAGTTACCCATCACCTTTGATTGATGATAATGTTGTCAATCAAAAACAATTATCTCCAGtaaatacaacaataacaatgatTAAAGCTGAAAATTTAATCAGTGCGAATGAACagcaaaaccaacaacaacaacaacaacaaaattgtgtAATTGCTGTTGACAATATGAATGATACAGCAGCAGCTGAGatgtcCACACTTGATGACGATGCCAATtctcagcaacagcaacaatcatCTACAGTCTCTTTCAATGATAAACTTACAGagtacaacaataataataccaATGGTTGTCAAACACTAAGCGCTTCCAATGACTCAAATTCTAATTCAACAGCAACAGCCGCTACTGCTGACCAACAGCTGGAAGGAATAAATCAAGAAATGgataataatagcaacaacacGCATAATAATACCATTGATTTTGAATCAATGGAAACCAATAACATCGAATCAACACACCCAGTTGGAGAACATGCAACTGCGCATGCTATTCACGATACACTGGGATTTTTCAATGAAACGCTTGATCTCTCCCAAGAGGATATACAACGTACACTGATTGCAAATTTACCATTTGACACCACCGAAGCACAAGCGGTGGAAGAAAAACATGTTGCTGTATCTGGTGGCTTAAATTTTCTAGCCAATACTGGCACAAGCGATGCTAGTGATGCTATTCCAGTACCTGGCAATGGCAATTGCGAGGATGATGATGAAACAGAtgatgtttttgtaaatttggaCGCATTTGATATGTTGGTAGAATTTCCCGATTTAGATTTGGATGATAAGCAAGCACTGTCACATGCCAGTCTGGAACATGGTGTGCTAACAAATCACAATCAGAATAGCAATGTCATAAATCAACATTTAGTAACGTCGCAATCTTCATATGAAGCTAACGAAAAGCAAACTGTTGGCATATCATCAACGAATTGCAATCGAAAATTGCTTAACATTTGTGATTTTAGTCCAGAGTGGTCTTATCCTGAAGGTGGTGTTAAAGTTCTTGTTGCTGGACCATGGACAAGTTCGAATGCCTTATATACTGTGCTCTTTGATTCATTACCAGTACCAACATTACTGGTGCAGGAGGGCGTCTTGCGTTGTTATTGTCCTGCACATGAAGTGGGCTTTGCCACACTACAAGTATCATGTGATGGTTATGTGGTCTCTAATTCAgtaatgtttgaatacaaaatgtCACCATGTCCAGAGGCGCCCAATGATGCGACCTCAAATGATTGTTTGTACAAATTTAGTCTGTTAAATCGGCTTTCGTCGATTGACgagaaaatgcaaattaaaacaGAGGCTGGCACATTGAGCGAGCAACACTCTATATTCTTTCAagcaaattttgaagaaaaacttgTTAGCTATTGTCACCAACTGATGAAAGGTACATGGCGTTCAAATACCAGTTCCTGGACAAGTGGCATCAAAGGCATGAGTTTGTTACATTTAGCCGCTGCGCTGGGTTACTCAAAGCTGGTCTGTGCAATGCTTAACTGGCGCGCcgaaaatccaaattttattttagaaacagAACTTGATGCGTTGAGTCAGGATATTTATGGCTATACACCAATGacttGGGCTTGTGCGCGGGGACATATTGATACTGCTTTGATTCTCTATAAGTGGAAtcagaatgctttaaaaataaagaactaCGCCCAACAGTCACCATTGGACATTGCTAATTTAAAAGGTCACAAAACTTTGCTGAGCGAAATTTATCGTTTGGAATATGAGCGTAATAAAAAGTACAATAAGAACTATTTGGGAACTTTATCATTGAATCTAAACAAATATGAAtttggCGACAAAAACAGCACCACAAAAATCGAACATACATCAACTGATGAATTTTTCGAGGACAAAGTAGGTGAACACATGTTCGCTGGTTTAGAAGGTTCATTTGATGTGCCACGGAGTCACGATGGTGTTTTCTTAAGGCCTGTAGCTGTAGCGAGCAACCAAAGTCCGCCAAATTATAGCCGTTTCTCTAAGCGTTCGTCTGTGGACAGTGGCATCAATATGGATATACGTGGCAAACCTGGAAAGTCGCTTAAGGACATATCGCGCTTGCAAAGCTTTGATACCCACGACAATTACGCGCTGTCAGTGGAGTCTACTTTGGACAACTTTAATACATCGTCGAATGCAACGAATTCATTGTTGTCCCCAATGCGTAAAATGGACTTTGCACTGTGCGAAGTTTCTACAGGCGACTCTAGTCCTTTACCCGATAAAGATCATGATGATTCATCAACGATTAATAACGATGACATAGCCGATGTTGTTATAAATAGTGAAACAGATGGCGTTGTAGGGGACTCCGATGCGAAGGTATTGACACTAGCTGAGCATATTATTGCAGCAATGCCTGAGCGCataaagAATGAAGCTGATGAAATGATGGTACTTGGCAGTCCAATAACTGAACCCTTGAATTCTGAGTCATCGGGCTTAAATGATAGTTTTATGGATCCATTACTTGATTCATTGCCAAATACACACTTCGACAGTGATTTCAGCTTGGACTTCAATGATCACAGCTATCGTTATCATGATGTTAGCACACCCTGCTCCAGCTTAAGTCCAGCTAGTTCAGGGCCTTTACAATCACCAGCTAGTTATTCGTTACTCGGTGTTGATCCATCGGTGAATTCACCTAGTCCACCGCCATCAACAAAGCAGTTGACGGAGTTTTTGCACGCATCAAGCTGTAATCAGTATCCTTTTGAAGCAGATTTCTCACGTTTAACTTTAACAGATAGCGAACAGCGTGAGCTTTATGAAGCTGCCAAATGCATACAGAAAGCATATCGCTCCTATAAAGGTCGCCAAAAACTGGAAGAGCAAAATAAAGAACGTTCAGCTGCTATtgttatacaaaattattatcGACGTTATAAGCAGTATGCATACTATCGACAAATGACAAATGCCGCATTGGTTATACAACATGGCTATCGTTCGTATTGTCGGCATAAACGTTTTAAGAAGTCACAATCGTCTACAACGACTCCGACATCATTGGGTGGTGGTAGCAACAGTAGCCAAAATAATTTGAGTAGCAATTCACAATGTTTGTCCAgtttttatgatcattttaaaaatgatcaacaacaacatgaaatgaTGATGAACTCACAGCCAAGTACACCAAAAGAGACTAGTCCTTCGGGACCTTTAAAgcGAACTTATTCACAATCAACGCAAAATCAAGCTGCCAGAAAAATTCAACAGTTTATGAGACAATCGAGAATTAAACTGCAGAGAGAGCGAGCCGAAAAAGAGAAGCTGGTGCACCAACGCAGGGCGGAATACCTTCAAAGCTTGCAGTTTCAAGGACAAGCGGAAATTGCGTGCAATCCAGAACAAAGTGAACCTAATCATGTAAAGCTTTTTAACACGCTGCATCAGCAAGAGCAATAG
Protein Sequence
MPVSSLFEKQTSKKNTQYNGMISTSVLWQLLLKLKKKSHALPAAALLLMANTMWHLPQTRYKRAYQSSSSSEQMEIAAILISFDRHNEWQSKEVKTRPKSGSLLLYSRKKVRYRRDGYCWKKRKDGKTTREDHMKLKVQGTECIYGCYVHSAILPTFHRRCYWLLQNPDIVLVHYLNVPYPDDNKMAVIAPSITLWGDKKEWTKEELVSQLKPMLSSVTSDDDSDSGNDIEISTAETVESIVCQLMEKQRLSRQAALVKQLDCGCADSSCVDGKSCSHPVMRRTGLLKSVSDKRGNFSDNYNQATSTTPNVVIGPKLYSRWPDRRQRDDNHHYQQQPHHAHQQLTQEGAIKFQIIQPQHNEQHQQQQQHHQLHQQQPQHYRQHNNNTHVTPHHQLFINRNNLIIQHHQQQQHTNFNQANTAASATTASSNVVSSTVSNNQNNQINLQRFVANHNNSNNNNNLQINNNRLQIAKTTITATPATPTALTEAGSLSSELIGNQNHISANSNINSNKINRNSNQLTLPAPQQQQQQQQHQQQQQNLDANTINNNNYNYNTSAQQQQQQELYKMQQQHKHSTTKDIKIDFQSTQQHTTSSSSNSVQPMCMSPEHQPSTPTHGSNASQNNSHPLLAQGGGGGGSSTLANITSSSSSPAAAAASNSSSSSSSSCSYPSPLIDDNVVNQKQLSPVNTTITMIKAENLISANEQQNQQQQQQQNCVIAVDNMNDTAAAEMSTLDDDANSQQQQQSSTVSFNDKLTEYNNNNTNGCQTLSASNDSNSNSTATAATADQQLEGINQEMDNNSNNTHNNTIDFESMETNNIESTHPVGEHATAHAIHDTLGFFNETLDLSQEDIQRTLIANLPFDTTEAQAVEEKHVAVSGGLNFLANTGTSDASDAIPVPGNGNCEDDDETDDVFVNLDAFDMLVEFPDLDLDDKQALSHASLEHGVLTNHNQNSNVINQHLVTSQSSYEANEKQTVGISSTNCNRKLLNICDFSPEWSYPEGGVKVLVAGPWTSSNALYTVLFDSLPVPTLLVQEGVLRCYCPAHEVGFATLQVSCDGYVVSNSVMFEYKMSPCPEAPNDATSNDCLYKFSLLNRLSSIDEKMQIKTEAGTLSEQHSIFFQANFEEKLVSYCHQLMKGTWRSNTSSWTSGIKGMSLLHLAAALGYSKLVCAMLNWRAENPNFILETELDALSQDIYGYTPMTWACARGHIDTALILYKWNQNALKIKNYAQQSPLDIANLKGHKTLLSEIYRLEYERNKKYNKNYLGTLSLNLNKYEFGDKNSTTKIEHTSTDEFFEDKVGEHMFAGLEGSFDVPRSHDGVFLRPVAVASNQSPPNYSRFSKRSSVDSGINMDIRGKPGKSLKDISRLQSFDTHDNYALSVESTLDNFNTSSNATNSLLSPMRKMDFALCEVSTGDSSPLPDKDHDDSSTINNDDIADVVINSETDGVVGDSDAKVLTLAEHIIAAMPERIKNEADEMMVLGSPITEPLNSESSGLNDSFMDPLLDSLPNTHFDSDFSLDFNDHSYRYHDVSTPCSSLSPASSGPLQSPASYSLLGVDPSVNSPSPPPSTKQLTEFLHASSCNQYPFEADFSRLTLTDSEQRELYEAAKCIQKAYRSYKGRQKLEEQNKERSAAIVIQNYYRRYKQYAYYRQMTNAALVIQHGYRSYCRHKRFKKSQSSTTTPTSLGGGSNSSQNNLSSNSQCLSSFYDHFKNDQQQHEMMMNSQPSTPKETSPSGPLKRTYSQSTQNQAARKIQQFMRQSRIKLQRERAEKEKLVHQRRAEYLQSLQFQGQAEIACNPEQSEPNHVKLFNTLHQQEQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00257816;
90% Identity
iTF_00972187;
80% Identity
-