Basic Information

Gene Symbol
Camta1
Assembly
GCA_963662105.1
Location
OY759211.1:6347660-6385738[-]

Transcription Factor Domain

TF Family
CG-1
Domain
CG-1 domain
PFAM
PF03859
TF Group
Unclassified Structure
Description
CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 0.19 6.2e+03 -2.3 0.7 20 41 152 173 104 202 0.63
2 5 7.4e-49 2.4e-44 150.6 2.5 2 116 237 349 236 349 0.98
3 5 0.33 1.1e+04 -3.0 2.4 41 80 488 530 469 562 0.62
4 5 0.39 1.3e+04 -3.3 2.1 49 88 541 579 502 586 0.64
5 5 1 3.2e+04 -4.7 2.5 23 64 703 744 695 752 0.45

Sequence Information

Coding Sequence
atggcagCGTATCGTTCTCTGCCTTTAGCACCCGTTTCTGCTACCACCATGGCTGCTACTGCAGTGGCAACACCACCTACGGGTCCCACCATGTATCATCATCAATCGATGACTGCTATGTCGAATAATGGTATTATATATCAATCGGCGGTACACGCCTCCATACATAGTTTAAATACCACCACAACAGTACAGAATCAACAACGTTCAACAACGCATCATCATATTTTAGCTACAGCAGCTGCAGCTGCGGTAGCAGCAACACGTCAATATACCaccagcagcagtagcagtagcattAATAATCCCGGTCATCtgcatcaacaacagcaaaatcatcagcaacaattgcagcaacatcatcatcatcatcatcaacagcaacagcagcagcagcaacatcatccGCATGGACTTTCTGcgcatcaacagcaacaacagcagcaacatcattCACATGCACTacatcaacaacatcagcaaACACCGTCGCATCCCCACCATTCGCAGTTGGCCTTACATCAGAATCATCATCTTTTTTTTAGTGGTTCGAGCATGAGTGGTGGtggtcatcatcatcatcatcaccatcatcggCAAATATTTAGCCAAATGCAGAGTGCAATTTTACCTTTAAACATTAatggTGAACCTATCAAACTCCCAGACAATTTGGAAAGTTTGCCAAGAGCTGACAGTTTTCCGTCACAACGGCATCGTTGGAATACAAATGAGGAAATCGCTGCGATTCTTATCAGCTTTGATAAACACAATGAATGGCAGTCTAAAGAAGTCAAAACAAGACCTAAAAGTGGCTCATTATTGTTGTATTCTCGCAAAAAAGTGCGTTACCGTCGGGATGGCTACTGCTGGAAGAAACGCAAAGATGGTAAAACAACACGTGAAgatcatatgaaattaaaagtacAAGGAACGGAatGCATCTATGGTTGTTATGTTCACTCTGCTATTTTGCCAACATTTCATCGCAGATGTTACTGGTTGTTACagAATCCTGATATTGTGCTGGTACATTATCTTAATGTGCCCTATCCGGATGATAACAAAATGGCAGTCATTGCGCCGAGCATCACACTTTGGGGCGATaagaaagaatggacgaaggaggaGTTGGTTAGTCAACTGAAACCAATGtTATCGAGCGTTACCTCAGATGATGATTCTGATTCAGGAAATGATATCGAAATATCGACTGCGGAAACGGTTGAGTCAATAGTTTGTCAGTTAATGGAAAAGCAGCGTTTATCACGTCAGGCTGCATTGGTAAAGCAATTGGATTGTGGTTGTGCAGATTCATCATGTGTTGATGGAAAGTCTTGTTCGCATCCTGTAATGCGTCGCACTGGACTTTTAAAGAGTGTTTCGGATAAACGTGGAAATTTCAGTGATAACTATAACCAAGCAACGTCAACGACACCAAATGTGGTCATTGGACCGAAGcttTATTCACGTTGGCCTGATCGACGTCAACGTGATGATACTCATCATTACCAGCAACAGCCACATCATGCTCATCAGCAACTGACTCAGGAGGGTGCGATCAAATTCCAAATTATACAGCCGCAACACAACGaacagcatcagcagcaacatcatcaacTTCATCAGCAACAACCACAGCATTATAGACAACATAATAATAACACACATGTCACGCCTCATCATCAACTATTTATCaatagaaataatttaattatacagcatcaccaacagcaacaacatacaaattttaatcaagcaaatacagcagcagcaacaacaacaacatcatcaaatgTTGTATCAACAGTATCAAACAatcaaaataatcaaataaatttacaacGATTTGTTGCCAATCATAAtaacagcaataataataataatttacaactaaataataatcgtttGCAAATTGCTAAGACAACAATTACAGCAACACCAGCAACACCGACAGCATTAACAGAAGCAGGCAGTCTGAGCAGCGAACTAATTGGAAATCAAAACCACATTTCTgcaaattcaaatataaattctaataaaataaaCCGCAACAGCAACCAATTAACATTGCCAGCACCTCAacagcatcaacaacagcagcagcaacaacagcaacaacaaaatttagataCAAATGctataaataataacaattacaATTATAATACTTCcgttcagcagcagcagcagcaagaactctataaaatgcaacaacaacataaacattCAACAacgaaagatataaaaattgacTTCCAACCCACACAGCAGCACACCGCCTCCTCATCCTCTTCGAATTCTGTGCAACCCATGTGCATGTCACCTGAACATCAACCTTCAACACCAACACATGGCAACAACGCAAGCCAGAACAACAGCCACCCTCTGTTAGCACAAGGTGGTAGCAGTACACTTGCAAATATTACTTCTTCTTCCTCACCAGCGGCAGCCTCCAactcatcatcatcgtcatcatcatcatcttgtAGTTACCCATCACCTTTGATTGATGATAATGTTGTCAATCAAAAACAATTATCTCCAgcaaatacaacaataacaatgattAAAGCTGAAAATTTAATCAGTGCGAATgaacaacaaaaccaacaacaacaaaattgtgcAATTGCTGTTGACAATATGAGTgatacagcagcaacagcagctgaGATGTCCACAGGCGATGCCAAttcacagcaacagcaacaatcatCTACAGTCTCTTTCCATGATAAACTTACAGagtacaacaataataatacaaatgGTTGTCAAACACTAAGCGCTTCCAATGACTCAAATTCTAattcaacagcaacaattgctACTGCTGACCAACAGCTGGAAGGGAGAAATCAAGAAATGGATAATAATAGCAATAACACGCATAATACCATTGATTTTGAATCGATGGAAACCAATAACATCGAATCAAGACACCCAATTGAAGAACATGCAACAACACATGCTATTCACGATACACTGGGATTTTTCAATGAAACTCTTGATCTCTCCCAAGAGGATATACAACGTACATTGATTGCAAATTTACCATTTGACACTACCGAAGCACAAGCGGTTGAAGAAAAACATGTTGTTGTATCTAGTGGCTTAAATTTTCTAGCCAATAATGGCACAAGCGATGCTAATGATGCTATTCCAGTACCAGGGAATATTAATTGCGAGGATGATGACGAAACAGAtgatgtttttgtaaatttggaCGCATTTGATATGTTGGTAGAATTTCCCGATTTAGATTTAGATGATAAGCAAGCATTGTCACATGCCAGTCTAGAACATGCTGCTGTTAGTGTGCAATTAGGTGGTGTGCTAACAAATCATAATCAGAATAGCAATGTCATAAATCAACATTTGGTGTCGTCGCAATCTTCATATGAAGCTAACGAAAAGCAAACTGTTGGCATATCATCAACAAATTGCAGTCGAAAATTGCTTAACATTTGTGATTTTAGTCCAGAGTGGTCCTATCCAGAGGGTGGTGTTAAAGTTCTTGTTGCTGGACCATGGACAAGTTCGAATGCCTTATATACTGTGCTCTTTGATTCGTTACCAGTACCAACGTTATTAGTACAGGAAGGTGTTTTGCGTTGTTATTGTCCTGCACATGATGTTGGCTTTGCCACACTACAAGTATCATGTGATGGTTATGTGGTCTCCAATTCAGTAATGTTTGAATACAAAATGTCACCGTGTCCAGAAGCGCCCAATGATGCGACCTCAAATGATTGTTTGTACAAATTTAGTCTGTTAAATCGGCTTTCGTCGATTGACgagaaaatgcaaattaaaacaGAGGCTGGCACATTGAGCGAGCAACATTCTTTATTCtttcaatcaaattttgagGAAAAACTTGTCAGCTATTGTCACCAATTGATGAAAGGTACATGGCGTTCAAATACCAGTTCCTGGACAAGTGGTATCAAAGGTATGAGTTTGCTACACTTAGCCGCTGCGCTGGGTTACTCAAAGCTGGTTTGTGCAATGCTTAACTGGCGCGCCGAAaatccaaattttattttagaaacaGAACTTGATGCGCTAAGTCAGGATATTTATGGCTATACACCAATGacttGGGCGTGTGCGCGTGGACATATTGATACTGCTTTGATTCTCTATAAGTGGAATCAGAATGCTTTGAAAATTAAGAACTACGCCCAACAGTCACCATTGGACGTTGCTAATTTAAAAGGTCACAAAACTTTGCTGAGCGAAATTTATCGTTTGGAATATGAGCGTAATAAAAAGTACAATAAGAACTATTTGGGAACTTTATCACTGAATCTAAACAAATATGAAttcgGCGACAAAAACAGCACCACAAAAATCGAACACACATCAACTGATGAATTTTTCGAGGACAAAGTAGGTGAACACATATTTGCTGGTTTAGAAGGTTCATTTGATATGCCACGGAGTCACGATGGTGTTTTCTTAAGGCCTGTAGCTTTAGCAAGcaaccAAAGTCCGCCAAATTATAGCCGTTTCTCTAAACGTTCGTCTGTGGACAGTGGCATCAATATGGATATACGTGGCAAACCTGGAAAGTCACTTAAGGACATATCGCGCTTACAAAGCTTTGATACCCACGACAATTACTCCCTGTCAGTAGAGTCTACTTTGGACAACTTTAATACATCGAATGCAACGAATTCATTGTTGTCGCCAATGCGTAAAATGGACTTTGCACTGTGCGAAGTTTCTACAGGCGACTCTAGTCCTTTACCCGATAAAGATCATGATGATTCATCAACGATTAATAACGATGACATAGCCGATGTTGTTATAAATAGTGAAACAGATGGCGTTGTAGGGGATTCCGATGCAAAGGTATTGACATTAGCGGAGCATATTATTGCAGCAATGCCTGAGCGCATAAAGAATGAAGCTGATGAAATGATGGTTCTTGGCAGTCCAATAACTGAACCCTTGAACTCAGAATCATCTGGCTTAAATGATAGTTTCATGGATCCATTACTTGATTCACTGCCAAATACACACTTCGACAGTGATTTCAGCTTGGACTTCAATGATCACAGCTATCGTTATCACGATGTTAGTACACCCTGCTCCAGCTTAAGTCCAGCTAGTTCAGGGCCTTTACAATCACCAGCTAGTTATTCGTTACTCGGTGTTGATCCATCGGTGAATTCACCTAGTCCACCACCATCAACAAAGCAGCTGACGGAGTTTTTGCACGCATCAAGCTGCAATCAGTATCCTTTCGAAGCAGATTTCTCACGTTTAACTTTGACAGATAGCGAACAGCGTGAACTTTATGAAGCTGCCAAATGCATACAGAAAGCATATCGCTCCTATAAAGGTCGCCAAAAACTGGAGGAGCAAAATAAAGAACGATCAGCTGCTattgttatacaaaattattatcgACGTTACAAGCAGTACGCATACTATCGACAAATGACAAATGCCGCATTGGTTATACAACATGGCTATCGTTCGTATTGTCGGCATAAACGTTTTAAGAAGTCACAATCATCTACAACGACTCCTTCATCATTGGGTGGTGGTAGCAACAGTAGCCAAAATAATTTGAGTAGCAATTCACAATGTCTGTCAAGTTTTTATgatcattttaaaaatgatcaacaacaacatgaatTGATGATGAACTCACAGCCAAGTACACCAAAAGAGACTAGTCCTTCGGGACCTTTAAAGCGAACTTATTCACAATCAACGCAAAATCAAGCTGCCAGAAAAATTCAACAGTTTATGAGACAATCGAGAATTAAACTGCAGAGAGAACGAGCCGAAAAAGAGAAGCTGGTGCACCAACGCAGGGCGGAATACCTTCAAAGCTTGCAGTATCAAGGACAAGTGGAAATTGTGTGCAATCCAGAACAAAGTGAGCCTAATCATGTAAAGCTTTTTAACACGCTGCATCAGCAAGAGCAATAG
Protein Sequence
MAAYRSLPLAPVSATTMAATAVATPPTGPTMYHHQSMTAMSNNGIIYQSAVHASIHSLNTTTTVQNQQRSTTHHHILATAAAAAVAATRQYTTSSSSSSINNPGHLHQQQQNHQQQLQQHHHHHHQQQQQQQQHHPHGLSAHQQQQQQQHHSHALHQQHQQTPSHPHHSQLALHQNHHLFFSGSSMSGGGHHHHHHHHRQIFSQMQSAILPLNINGEPIKLPDNLESLPRADSFPSQRHRWNTNEEIAAILISFDKHNEWQSKEVKTRPKSGSLLLYSRKKVRYRRDGYCWKKRKDGKTTREDHMKLKVQGTECIYGCYVHSAILPTFHRRCYWLLQNPDIVLVHYLNVPYPDDNKMAVIAPSITLWGDKKEWTKEELVSQLKPMLSSVTSDDDSDSGNDIEISTAETVESIVCQLMEKQRLSRQAALVKQLDCGCADSSCVDGKSCSHPVMRRTGLLKSVSDKRGNFSDNYNQATSTTPNVVIGPKLYSRWPDRRQRDDTHHYQQQPHHAHQQLTQEGAIKFQIIQPQHNEQHQQQHHQLHQQQPQHYRQHNNNTHVTPHHQLFINRNNLIIQHHQQQQHTNFNQANTAAATTTTSSNVVSTVSNNQNNQINLQRFVANHNNSNNNNNLQLNNNRLQIAKTTITATPATPTALTEAGSLSSELIGNQNHISANSNINSNKINRNSNQLTLPAPQQHQQQQQQQQQQQNLDTNAINNNNYNYNTSVQQQQQQELYKMQQQHKHSTTKDIKIDFQPTQQHTASSSSSNSVQPMCMSPEHQPSTPTHGNNASQNNSHPLLAQGGSSTLANITSSSSPAAASNSSSSSSSSSCSYPSPLIDDNVVNQKQLSPANTTITMIKAENLISANEQQNQQQQNCAIAVDNMSDTAATAAEMSTGDANSQQQQQSSTVSFHDKLTEYNNNNTNGCQTLSASNDSNSNSTATIATADQQLEGRNQEMDNNSNNTHNTIDFESMETNNIESRHPIEEHATTHAIHDTLGFFNETLDLSQEDIQRTLIANLPFDTTEAQAVEEKHVVVSSGLNFLANNGTSDANDAIPVPGNINCEDDDETDDVFVNLDAFDMLVEFPDLDLDDKQALSHASLEHAAVSVQLGGVLTNHNQNSNVINQHLVSSQSSYEANEKQTVGISSTNCSRKLLNICDFSPEWSYPEGGVKVLVAGPWTSSNALYTVLFDSLPVPTLLVQEGVLRCYCPAHDVGFATLQVSCDGYVVSNSVMFEYKMSPCPEAPNDATSNDCLYKFSLLNRLSSIDEKMQIKTEAGTLSEQHSLFFQSNFEEKLVSYCHQLMKGTWRSNTSSWTSGIKGMSLLHLAAALGYSKLVCAMLNWRAENPNFILETELDALSQDIYGYTPMTWACARGHIDTALILYKWNQNALKIKNYAQQSPLDVANLKGHKTLLSEIYRLEYERNKKYNKNYLGTLSLNLNKYEFGDKNSTTKIEHTSTDEFFEDKVGEHIFAGLEGSFDMPRSHDGVFLRPVALASNQSPPNYSRFSKRSSVDSGINMDIRGKPGKSLKDISRLQSFDTHDNYSLSVESTLDNFNTSNATNSLLSPMRKMDFALCEVSTGDSSPLPDKDHDDSSTINNDDIADVVINSETDGVVGDSDAKVLTLAEHIIAAMPERIKNEADEMMVLGSPITEPLNSESSGLNDSFMDPLLDSLPNTHFDSDFSLDFNDHSYRYHDVSTPCSSLSPASSGPLQSPASYSLLGVDPSVNSPSPPPSTKQLTEFLHASSCNQYPFEADFSRLTLTDSEQRELYEAAKCIQKAYRSYKGRQKLEEQNKERSAAIVIQNYYRRYKQYAYYRQMTNAALVIQHGYRSYCRHKRFKKSQSSTTTPSSLGGGSNSSQNNLSSNSQCLSSFYDHFKNDQQQHELMMNSQPSTPKETSPSGPLKRTYSQSTQNQAARKIQQFMRQSRIKLQRERAEKEKLVHQRRAEYLQSLQYQGQVEIVCNPEQSEPNHVKLFNTLHQQEQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00257816;
90% Identity
iTF_01486170;
80% Identity
-