Tpra030251.1
Basic Information
- Insect
- Tricholauxania praeusta
- Gene Symbol
- retn_1
- Assembly
- GCA_949775025.1
- Location
- OX459031.1:13180817-13214445[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.2e-26 1.4e-22 81.1 0.0 2 89 24 109 23 109 0.96 2 2 0.48 2.1e+03 0.4 0.4 2 26 246 267 222 291 0.64
Sequence Information
- Coding Sequence
- ATGCAGCTAAATAGTATCTGTTGTGTGGATGATGTAGATGAGCTCTATGAAATAAATGATGATCCAAAGCGTAAGGAGTTTCTGGATGACTTGTTTTCATTCATGCAAAAAAGAGgCACACCTATTAATCGTTTGCCTATTATGGCCAAGTCTGTACTGGATCTATATGAGCTTTACAATTTAGTTATAGCACGTGGTGGTCTGGTTGATGTCATCAATAAGAAATTATGGCAAGAAATAATCAAAGGACTGCATCTGCCGTCGAGTATTACAAGTGCGGCCTTTACGCTGAGAACACAATATATGAAATATCTCTACCCATATGAGTGTGAGAAGAAAAACTTAAGTTCACCAGCCGAATTACAAGCAGCCATCGATGGTAACAGACGTGAAGGACGACGCTCCAGCTATGGACAATTTGAGGCGATGCACAATCAAATGCAATTACCTCAAATGGCACGTCAAGGTTTACCTGGTGCCATGCAACAAATGTCGCCACTGGCTTTGGTTACACATGCTGCCGCCGCAAATAGCCCACAAGCACAGGCAGcggccgctgctgctgctgcgcaTCATAGACTGATGGCACCTTCATTCGGGCAGGTGCCAAATTTGGTAACTCACGAAATTGAACAACGCATGatggaatatttaaaattgatacAGGGAAAAAAAGAACCAGTAGCTGCAGCATtgcaacaacatcagcaacagcagcagcagcagcagcaacaacagcagcagcagcaacagcagctacaacagcaacatcagcgACAACGTTCCCAAAGTCCAGAGATTACAACACGTGAAGCATTAAATGCACTGGAAATGTCACGTGTTGCACTTTGGCAAATGTATCATAATAACACAAGTCCACCGGCTTCAGTGAATACCTCACCACAGGGTGGGGGTATTATTGGGGTTGCTGGTGCTGGCGCCAACAATGGCGCTGAGCCACAACGCAGCGAAGCCCTCAACCTTTCAGAGTCACCACCGAATCTCAACACAGCGGCAATTAAACGTGAGCGTGAACGCGAACCAACGCCTGAACCAGTGGAACGTGATGATTTTCACCATTTGCCACCGCCAGCTAAACGTGTTGGCAGCGGTAGTAGTGGTGGCACTATGACCAGTGGTGGGACTATTGTACCACCTGGTTTCCCAGCGAATTTCTACCTACCGCCCAATTTTCATCACGCTGCAGCAGCGGTGGCGGCGCATCATCAGCATCACGAATCCGATAATGAAGAGCACGATGACGACGATGAAGACGATGGAGCAGAGCACAATACAACGGTAAATTCATCGAATGATGATGATCAGCATGaacgaaaacaaataaatggccatcatcatcatcatcatcaacatcaccAGCAGCACCATTATCAACAGTTGCAGCATCATCTGCATCATAATGAACGCCATCAACTTGATAAGTCTGACGATTCTGCTATTGAAAATTCACCCTCAACATCTGCCTCTGCGGGAAATGGTCATAGTTCACCTATTTCGACGAAAAAGATACATCTCTCCAAGCAACAGCAAGTACCGTCTGCGTCGCAATGGAAAGACACCACAGCAGATGGTGAGAGAAATGCAGCGAattgtggtggtggtggtgctgTTGCCATAAGTCCTTTGGAACAGTTGAGTTTGCTGTCTGGCATGCAGTTTCGGGTGGCACGAAATGGTACTGGCGCTAATGGTGAACAGCAGCTAATCGTAAACCTCGAATTGAATGGTATCAAATACTCTGGCGTGCTTATTGCCAATTCAGCGGCAGTAGGTTCAACTACAACTTGCAGTCGGAATAAATTGAATGCGGATGATGCAGCTGCTGTTTCAGCACCAACAGACAGTGAGACACCAACATCGCCAAGAGCGAAAGCAACAACAGATGCTGGAAAATTATTGGATTCATCGACAAGTAAAATAACAACATCCAGCAGCATGGATACAACTGATGTAGACAccggaacaacaacaacaaaatcaacttCACTCAAGCTAACAAATGGACCCAGCAGCAATGCATTAAAAGATTCGTTATTGAGTTCATAA
- Protein Sequence
- MQLNSICCVDDVDELYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSSPAELQAAIDGNRREGRRSSYGQFEAMHNQMQLPQMARQGLPGAMQQMSPLALVTHAAAANSPQAQAAAAAAAAHHRLMAPSFGQVPNLVTHEIEQRMMEYLKLIQGKKEPVAAALQQHQQQQQQQQQQQQQQQQQLQQQHQRQRSQSPEITTREALNALEMSRVALWQMYHNNTSPPASVNTSPQGGGIIGVAGAGANNGAEPQRSEALNLSESPPNLNTAAIKREREREPTPEPVERDDFHHLPPPAKRVGSGSSGGTMTSGGTIVPPGFPANFYLPPNFHHAAAAVAAHHQHHESDNEEHDDDDEDDGAEHNTTVNSSNDDDQHERKQINGHHHHHHQHHQQHHYQQLQHHLHHNERHQLDKSDDSAIENSPSTSASAGNGHSSPISTKKIHLSKQQQVPSASQWKDTTADGERNAANCGGGGAVAISPLEQLSLLSGMQFRVARNGTGANGEQQLIVNLELNGIKYSGVLIANSAAVGSTTTCSRNKLNADDAAAVSAPTDSETPTSPRAKATTDAGKLLDSSTSKITTSSSMDTTDVDTGTTTTKSTSLKLTNGPSSNALKDSLLSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00257600;
- 90% Identity
- -
- 80% Identity
- -