Tpre005691.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Trichogramma pretiosum
Gene Symbol
ZNF236
Assembly
GCA_000599845.3
Location
NW:1360926-1374329[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 26 0.4 6.6 6.9 1.6 1 23 173 195 173 195 0.96
2 26 0.0038 0.061 13.3 0.1 1 23 201 223 201 223 0.98
3 26 3.9e-07 6.3e-06 25.9 0.8 2 23 229 250 229 250 0.98
4 26 0.21 3.5 7.8 0.2 2 23 257 278 256 278 0.96
5 26 0.0019 0.031 14.2 1.4 3 23 290 310 289 310 0.97
6 26 8.5e-07 1.4e-05 24.8 1.4 1 23 331 353 331 353 0.99
7 26 0.00013 0.0022 17.9 2.0 1 20 359 378 359 381 0.93
8 26 0.0022 0.036 14.0 1.1 1 23 387 409 387 409 0.98
9 26 0.0053 0.086 12.8 0.2 1 23 569 591 569 591 0.98
10 26 0.00029 0.0047 16.8 0.9 1 23 597 620 597 620 0.97
11 26 0.012 0.19 11.8 0.1 2 23 626 647 625 647 0.97
12 26 0.13 2.2 8.4 0.1 1 23 650 672 650 672 0.96
13 26 0.011 0.18 11.9 4.7 1 23 746 768 746 768 0.98
14 26 4.1e-06 6.7e-05 22.6 0.1 1 23 774 796 774 796 0.97
15 26 4.6e-05 0.00075 19.3 4.4 1 23 802 824 802 824 0.98
16 26 7.2e-05 0.0012 18.7 4.8 1 23 830 852 830 852 0.98
17 26 9.2 1.5e+02 2.6 3.5 2 23 1154 1175 1153 1175 0.91
18 26 0.00087 0.014 15.3 4.8 1 23 1182 1204 1182 1204 0.99
19 26 0.002 0.032 14.2 1.6 1 23 1210 1232 1210 1232 0.97
20 26 6.5e-05 0.0011 18.8 0.1 2 23 1267 1288 1267 1288 0.97
21 26 0.00034 0.0055 16.6 1.2 1 23 1294 1316 1294 1316 0.99
22 26 4.6e-05 0.00076 19.3 1.1 1 23 1322 1344 1322 1344 0.98
23 26 4.6e-05 0.00075 19.3 2.2 1 23 1350 1372 1350 1372 0.98
24 26 7e-05 0.0011 18.7 1.3 2 23 1507 1528 1507 1528 0.98
25 26 1.4e-05 0.00023 20.9 1.5 1 23 1534 1556 1534 1556 0.98
26 26 0.0024 0.039 13.9 6.3 1 23 1562 1585 1562 1585 0.94

Sequence Information

Coding Sequence
atgttAAACATGTTTAAAATGAGTGCATCTCCATtaggaatgaattttttgttgactGACGATGGAAACACATTGTTGGCTATGCGTCaAGCGAAAGATGGAACGCTGGAGCTTATGTCGACTCCAGTTACAATTGTTGGTAATACATCTAATCAAGTTTTACAGTCTTTGACTAATTCAATGCTACGTTTCAAATCCAACTATagtGATCCAAACAGTCTTTCTGTAGACAATGTACAGTTTAAATCATTACATAGTTCACATTCAATTTCCATCAATCAAGTACATTCATCAAATATGAATAGTACTGTGTCTCACcatttaaaagattttaaggaaaatattgaatgtgATGACGAGTTGCTTGAATTTTCTCAAGAACTTTCTTGCTGTGGCAGAAATGCATCCAGTACACAAAACTGTGATAAACAATATTCTGGTAAGCGTAGTAAAAAATCAACAGCATCCAAAAAACAAGCAAAaggcaaaagtaaaaataagggTGTAAAAGATTTATACCAGTGTGATATGTGTGCagaagaatttgaaaaatattccgTTTACCAAAAACACTTGCATGACCATGCTTTTGATAAAGCTTATCGCTGCCCAAAATGTGCTGAATCGTTTAATGCACCACTCAATTTCAAACTACACATGGCCATACACAAGCTCGGCAGCCCAAAGTGTCCGGAATGCGGGAGGAAATTTTCGCGCTTAGCGAGTCTGAAAACTCACATGAGAGTCCACGAGATCGACGAAAGTCTTTACTGCACCGAATGCGACGACGTATTCGACTCCAAGGCACAACAGGAGGAGCACCTGAAGCTTCACCAAGAGAAATGGACCTCGGAGGAGTATCGCAACTGCAAGCTCTGCCGCAAAAATTTCACCCAGCCGGCCCTGTATCGGCAACATCTGCGCGACCACTACAGGGTCCAGGAGAAATACATCAAGCAGACGAGCAGAGGTGCCAGACTGCGCACCAGCTACAAGTGCAACATATGCTTCAAAGTCTTCAGATCGCCGAGCTTTCTGTCCAGACACATACGCGTTCACACTCGGGAGAGGCCGTACAAGTGTAAATTATGCCAAAAGGGTTTTtcgcaaaaaagctcgctgcGCACGCACGAGTGGACGCACAGCGGCACCAAGCCCTTCTCCTGCGACGAGTGTCAAGCTAGATTTGCCATACACAGCAATTTGCGAATACACGTGAAACGTCACGAGAAAAATCGGCGAGATCGATGTCGGTCGCGGGCGCACAAGAGCTCGCACTGTTCCCTGGCCTTCAAAGAGCCGAGGGTGCTCGCTCGGCACACGAGCCGTTTCCACAATCGGAATGTCAAAAGCGCGGCAACTGAGCAATCTTCAAACGCCGCCACTATCGCGGCAAACTCCGCCGCTACCGAGAATACGGGTCAGCGTAACGAGCAAGAGCACAGAATCCAAGACGGAGAAGAACAAGAGCAGCGACTTGAGCCAGAGCAGAGATGCCAAGATGAAAGTGCAGCAAATGACAACGAGCAGGAAGTCGAGCAAGACAGTCAGGGCTTCGAATTGATGGAAAGCGACGACGATGTCGACGACGctgaagacgacgacgaggaaatCGACGGGGGCGTCGTTAAAAAGAAACTTTCCGATCCAGACAAATGGAAGTACGTGCAAGTGAATCATCGGATCATAGACGGAAAGAAAGTTTACGAGTGCTTGTACTGTGATAAAATAGCCAAAAAGCCATCAGACATAGTTAGACATTTAAGTACCCACACAGGCGAAAAACCATTCAAGTGCGACGAGTGCAATCAATCGTTTACCCTCAAAGGCTCTCTAGTCGttcacaagaaaaaaattcacggaGGAGACGCCGTCACCTGTCCAAAGTGCCCAGCTGAGCTTCCAAGTAAACAAGCGCTCAAGGATCATTTGAAaACGCACAACAAGTTCGTGTGCAAATTGTGCGAGGCGtctttcgaaaatttcgaGGCGATGCGCGAGCACGCGAACGAGCACAACACACCGGCCGAGGTGAAGAACCGACGCCGCAAAATGGAGAAAAAGACCGGCTACTTGACGCGCAAACCCAAAAATCAGAGCTGGTCCGAGGAGGTGGAACAGCTGGCGGCCAAAGTCGAGCTGGCCAAGCCGCTCGTGCTGACCCAGTCGGGCGACGGTCTACTCAGAGCCGAGCCTCAGTTGCGCCAGCAGCACGGACGGGGCGAGGGTCGGCCCCACAAGTGCCCCAGCTGCACGGCCGCCTTCATGAAGCTCAGCCacctgcagcagcactacCGCAAGCACACGGGCGAGCGACCCTTCGTTTGCGAGATTTGCGACAAGCCGTTCATTACGAAGAGTGCGCTCAAGGCTCACTACACGATTCACAACaagacgaaaaatttcaagtgcGTGACGTGCCACGCGACTTTTTCCAACTCGAGCAGCTTGAAGAGGCACCAAACGACTCACGTGAACAAGCGTCCCTTTATGTGTCCTTACTGCAACAAAACTTTCAAGACCAGTGTCAATTGCACCAAGCACATGAAAATACATCAAAAAGAGGTTGCGCAGGAGgTTCTTGAACAACAGAAAAAGCAAGCGACTCGACCACCGACTCCAGTAACTGTACAAGAAAATTTACTTGCCGATAATGAATACAATATGcctttaattgtaaatataaatcagtCCATGCAAACGGTAACACAAAATCAAAGCCAAACTGTATTCATTGATCCAAAATGCTCTTATCTTAATTCGCCAATTGCTTCAGTATTAAACGAGCCTCAAAACGTCGATGTTGTTTCAAATCAGAATTCAGTTATTTCCAATGATCTGAACACTGCCAATTTGTCTAATTTTACCGCAGATACAACGTACACGgtgGAGAACATGCATGAAATTGAATCGTTGCATCAACAATTGTATAACATGGGCTTGAATTTCGGGCTGAATACTCCAGAAAAGACAATCGAAGATTCGAATTTCTTGCCAAATAGAGATCAGCATCCAACTTTGAGCATCATTTACGACAATGGTAAAGTGGATTCATCGGTCgatttgaatacattttcttctCAACTCGAAAGTCTCGGTATCAATCAGTTGGCATTTCAAGACGTTGGCGATTCCAATGTTGCCTTAGCCTCGAACAACACTGCTGCGCCCATCAACTTGTGTTCCGAAGTTATggagcaacaacagcagcaacaaaataGTCTCAATGTTTTGGCCTCGCATCAGAATCAAAGTGCTAATCTGAAGCTTCAAAACGTCAATCCGAACATGCAAAGCGCCGCGCCAAAGATAGACGGCTCCGACTTGAATATACAAAGGGCCCTATGTTTAAGCGATAGTAATTTTAGCAACGGCTTTTTGTGCACCTCGCCTATGGATATACTCAATGAGAAGTTCCTTGAGCAAAACGAGGGGTTCATTAGCGAGGATCAAAATCTACAGTGCCATATATGTGATAAGCAGCAACTGTCAGTGAAGGATCTgcaaaaacatttgaaaattcatcagGTTCGAGTCAAGGAGTACGAGTGTTTTCAGTGTTCTTACAAATTTCACTCCAATAGTGGGCTAAGTAGACACATGAAAACTCACAAGAATCAAGAGACCCACAAATGCTACGAGTGCAATCAAGAGTTTCCCACATCGCTGCAGTTGAGGGAGCACATAAAAGAACATGTAAAATATGAATTGGCACGTAAAAATGCCGCAGGGGACTCGGATGTATCGGTAGACATGGATTTGGGTTCGGATAAGAAAAGTCCCAAATCAAAGAAAAACGTTTGTGATTACTGCTCAAAAATGTTCGGCAAACCCAGCGATCTCGTGAGGCACGTAAGAATTCACACTGGCGAAAAGCCCTACAAGTGCGAATATTGCGCCAAGAGTTTCGCCGTCAAATGCACTTTAGTGGCACACCTGAAAATTCACAACGGTCATAAATCATTTCAGTGTCACGTGTGTAATAGTATGTTCGCCTCGAAGGGTGGTCTCAAAGTACACATGCGGCTGCACACAGGAGCCAGGCCGTTCGAGTGCAACGAGTGCGGCCTGAAATTCCGAACATCCGGACACCGTAAAGTTCACATGCTGACGCACAGTCAAGAAGTTCCAAGCATCGTTAATAATAGCAACGTTAGCCAGGCTCAACTCATCGTCGACAACGACATGAGCAATGGTAAGCTCGTTGATCTGCCGATGGTCGAAACGGacgtagaaaaattattggaaaatagTCACTGGATGGAGAACTTGAAGTTCTTGATGAACAACGGCTTGGCCAACATTCAAGACGGccaaaatgaaattgaagctgacgctcaacagcagcaagaaCAGCAATCCCAAGCCACATCGCCTCTCGTTTTCTCAACGTCACTGGACAACGAGCAAAGCCTAGTCGAGGGCGAGAACTGCGTACTACTTAAGTTACAAGAAACACTGCCAGAACAAATTAATGAAGAAAAGCAAGAAATAGCAACCGGAAGCGGTAAATTACGGCAATGTGTTCAGTGTAGCAAAACATTCTCGAAGCCTTTCCAGCTCGAGCGACACTATCGTGTCCACACCGGGGAACGGCCCTTCGTCTGCGACTTGTGCGACAAGTCCTTTACTCAAAAGTCTACGCTCGATCTTCATCGCAAGAGCCACTCGGGCGAGAAGCCGTATTCTTGTCCTCACTGCTCGCGTCATTTCACGCAGTCCTGCAATTTACGCACTCACGTGGGCCGCATTCACAGGGACAAGCTGGCCGATGCAACGCAAGAACTTCAAGATGAGCAACATGAACCACCGCAGTTTGTAACTTACGAATCCAAAGTCGTGCTGCAATCTATTGAAGATTCCAGCATTCAGTTCGATGATTTGTCGTTTGCTGATTTATTGGCATGA
Protein Sequence
MLNMFKMSASPLGMNFLLTDDGNTLLAMRQAKDGTLELMSTPVTIVGNTSNQVLQSLTNSMLRFKSNYSDPNSLSVDNVQFKSLHSSHSISINQVHSSNMNSTVSHHLKDFKENIECDDELLEFSQELSCCGRNASSTQNCDKQYSGKRSKKSTASKKQAKGKSKNKGVKDLYQCDMCAEEFEKYSVYQKHLHDHAFDKAYRCPKCAESFNAPLNFKLHMAIHKLGSPKCPECGRKFSRLASLKTHMRVHEIDESLYCTECDDVFDSKAQQEEHLKLHQEKWTSEEYRNCKLCRKNFTQPALYRQHLRDHYRVQEKYIKQTSRGARLRTSYKCNICFKVFRSPSFLSRHIRVHTRERPYKCKLCQKGFSQKSSLRTHEWTHSGTKPFSCDECQARFAIHSNLRIHVKRHEKNRRDRCRSRAHKSSHCSLAFKEPRVLARHTSRFHNRNVKSAATEQSSNAATIAANSAATENTGQRNEQEHRIQDGEEQEQRLEPEQRCQDESAANDNEQEVEQDSQGFELMESDDDVDDAEDDDEEIDGGVVKKKLSDPDKWKYVQVNHRIIDGKKVYECLYCDKIAKKPSDIVRHLSTHTGEKPFKCDECNQSFTLKGSLVVHKKKIHGGDAVTCPKCPAELPSKQALKDHLKTHNKFVCKLCEASFENFEAMREHANEHNTPAEVKNRRRKMEKKTGYLTRKPKNQSWSEEVEQLAAKVELAKPLVLTQSGDGLLRAEPQLRQQHGRGEGRPHKCPSCTAAFMKLSHLQQHYRKHTGERPFVCEICDKPFITKSALKAHYTIHNKTKNFKCVTCHATFSNSSSLKRHQTTHVNKRPFMCPYCNKTFKTSVNCTKHMKIHQKEVAQEVLEQQKKQATRPPTPVTVQENLLADNEYNMPLIVNINQSMQTVTQNQSQTVFIDPKCSYLNSPIASVLNEPQNVDVVSNQNSVISNDLNTANLSNFTADTTYTVENMHEIESLHQQLYNMGLNFGLNTPEKTIEDSNFLPNRDQHPTLSIIYDNGKVDSSVDLNTFSSQLESLGINQLAFQDVGDSNVALASNNTAAPINLCSEVMEQQQQQQNSLNVLASHQNQSANLKLQNVNPNMQSAAPKIDGSDLNIQRALCLSDSNFSNGFLCTSPMDILNEKFLEQNEGFISEDQNLQCHICDKQQLSVKDLQKHLKIHQVRVKEYECFQCSYKFHSNSGLSRHMKTHKNQETHKCYECNQEFPTSLQLREHIKEHVKYELARKNAAGDSDVSVDMDLGSDKKSPKSKKNVCDYCSKMFGKPSDLVRHVRIHTGEKPYKCEYCAKSFAVKCTLVAHLKIHNGHKSFQCHVCNSMFASKGGLKVHMRLHTGARPFECNECGLKFRTSGHRKVHMLTHSQEVPSIVNNSNVSQAQLIVDNDMSNGKLVDLPMVETDVEKLLENSHWMENLKFLMNNGLANIQDGQNEIEADAQQQQEQQSQATSPLVFSTSLDNEQSLVEGENCVLLKLQETLPEQINEEKQEIATGSGKLRQCVQCSKTFSKPFQLERHYRVHTGERPFVCDLCDKSFTQKSTLDLHRKSHSGEKPYSCPHCSRHFTQSCNLRTHVGRIHRDKLADATQELQDEQHEPPQFVTYESKVVLQSIEDSSIQFDDLSFADLLA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01482796; iTF_01484084;
90% Identity
iTF_01484084;
80% Identity
-