Tden004249.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Trichogramma dendrolimi
Gene Symbol
ZNF236
Assembly
GCA_034770305.1
Location
JAPMIB010000009.1:436883-449522[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 25 0.45 16 6.9 1.6 1 23 173 195 173 195 0.96
2 25 0.0042 0.15 13.3 0.1 1 23 201 223 201 223 0.98
3 25 4.3e-07 1.6e-05 25.9 0.8 2 23 229 250 229 250 0.98
4 25 0.24 8.7 7.8 0.2 2 23 257 278 256 278 0.96
5 25 0.0021 0.077 14.3 1.4 3 23 290 310 289 310 0.97
6 25 5.2e-05 0.0019 19.3 3.5 1 23 331 353 331 353 0.99
7 25 0.00015 0.0055 17.9 2.0 1 20 359 378 359 381 0.93
8 25 0.011 0.41 12.0 1.7 1 23 387 409 387 409 0.98
9 25 0.0058 0.21 12.9 0.2 1 23 557 579 557 579 0.98
10 25 0.00032 0.012 16.8 0.9 1 23 585 608 585 608 0.97
11 25 0.00027 0.0098 17.1 0.1 2 23 614 635 613 635 0.97
12 25 0.042 1.5 10.2 0.1 1 23 638 660 638 660 0.96
13 25 0.012 0.44 11.9 4.7 1 23 734 756 734 756 0.98
14 25 4.5e-06 0.00017 22.6 0.1 1 23 762 784 762 784 0.97
15 25 2.4e-05 0.00089 20.3 2.4 1 23 790 812 790 812 0.98
16 25 8e-05 0.0029 18.7 4.8 1 23 818 840 818 840 0.98
17 25 0.00097 0.035 15.3 4.8 1 23 1170 1192 1170 1192 0.99
18 25 0.0022 0.079 14.2 1.6 1 23 1198 1220 1198 1220 0.97
19 25 7.2e-05 0.0026 18.9 0.1 2 23 1255 1276 1255 1276 0.97
20 25 0.00038 0.014 16.6 1.2 1 23 1282 1304 1282 1304 0.99
21 25 5.1e-05 0.0019 19.3 1.1 1 23 1310 1332 1310 1332 0.98
22 25 0.00028 0.01 17.0 3.1 1 23 1338 1360 1338 1360 0.98
23 25 7.8e-05 0.0029 18.8 1.3 2 23 1493 1514 1493 1514 0.98
24 25 2.8e-05 0.001 20.2 1.5 1 23 1520 1542 1520 1542 0.97
25 25 0.0027 0.098 13.9 6.3 1 23 1548 1571 1548 1571 0.94

Sequence Information

Coding Sequence
atgTTAAACATGTTTAAAATGAGTGCATCTCCATTaggaatgaattttttgttgactGATGATGGAAACACATTATTGGCTATGCGTCaAGCAAAAGATGGAACGCTGGAGCTTATGTCGACTCCAGTTACCATTGTTGGTAATACATCTAATCAAGTTTTACAGTCTTTGACTAATTCAATGCTACGTTTCAAATCCAACTCTagcGATCCAAACAGTCTTTCTGTAGACAATGTACAGTCTAAATCATTACATAGTTCACATTCAATTTCCATCAATCAAGTACATTCATCAAATATGAATAGTACTGTATCTCAccatttaaaagattttaaggaaaatattgaatgtGATGACGAGTTGCTTGAATTTTCTCAAGAACTTTCTTGCTGTGTCAGAAATCCACCCAATACACAAAACTGTGATAAACAATACTCTGGTAAGAATGGTAAAAAATCAACAGCAtccaaaaaacaaacaaagaGCAAAAGTAAAACTAAGGGTGTAAAAGATTTATACCAGTGTGATATGTGTGcagaagaatttgaaaaatattccgTTTACCAAAAACACTTGCATGACCATGCTTTTGATAAAGCTTATCGCTGCCCAAAATGTGCTGAATCGTTTAATGCACCACTCAATTTCAAACTGCACATGGCCATACACAAGCTCGGCAGCCCAAAGTGTCCGGAATGCGGGAGGAAATTTTCGCGCTTAGCGAGTCTGAAAACTCACATGAGAGTCCACGAGATCGACGAAAATCTTTACTGCACCGAATGCGACGACGTATTCGACTCCAAGGCACAACAGGAGGAGCACCTGAAGCTTCACCAAGAGAAATGGACCTCGGAGGAGTATCGCAACTGCAAGCTCTGCCGGAAAAATTTCACCCAGCCGGCCCTGTACCGGCAACACCTGCGCGACCACTACAGGGTCCAGGAGAAATACATCAAGCAGACGAGCAGAGGTGCCAGACTGCGCACCAGCTACAAGTGCAGCATATGCTTCAAAGTCTTCAGATCGCCGTGCTTTCTGTCCAGACACATACGCGTTCACACTCGGGAGAGGCCGTACAAGTGTAAATTATGCCAAAAGGGTTTTtcgcaaaaaagctcgctgcGCACGCACGAGTGGACGCACAGCGGCACCAAGCCCTTCTCCTGCGACGAGTGTCAAGCTAGATTTGCAATACACAGCAATTTTCGAATACACGTGAAACGTCACGAGAAAAATCGCCGAAATCGATGTCGGTCGCGGGCGCACAAGAGCTCGCACTGTTCCCTGGCCTTCAAAGAGCCGAGGGTGCTCGCTCGGCATACGAGCCGTTTCCACAATCGGAATGTCAAAAGCGCGGCAAATGAGCAATCTTCAAACGCCGCCACTATCGCGGCAAACTCTGCCGCTACCGAGAATACGGGTCAGCGTAACGAGCAAGAGCAGAGAACCCAAGACGGAGAAGAACGAGAGCAGCGACTTGAGCCAGAGCAGAGATGCCAAGATGAAAGTGCAGCAAATGACAACGAGCAGGAAGTCGAGCAAGACAGTCAAGGCTTCGAATCGATGGAAAGCGACGACGGTGttgaggacgacgacgacgacgagtgtcGACGAGGAAATCGGAAGTACGTGCAAGTGAATCATCGGATCATAGACGGAAAGAAAGTTTACGAGTGCTTGTACTGTGATAAAATAGCCAAAAAGCCATCAGACATAGTTAGACATTTAAGTACCCACACAGGCGAAAAACCATTCAAGTGCGACGAGTGCAATCAATCGTTTACCCTCAAAGGCTCTCTAGTCgttcacaagaaaaaaattcacggtGGAGACGCCGTCACCTGCCCAAAGTGCCCAGCTGAGTTTCCAAATAAGCAAGCGCTCAAGGATCATTTGAAAACGCACAACAAGTTCGTGTGCAAATTGTGCGACGCGtcctttgaaaattttgaggcGATGCGCGAGCACGCGAACGAGCACAACACACCGGCCGAGGTTAAGAACCGGCGCCGAAAGATGGAGAAAAAGATCAGCTACTTGACGCGCAAACCCAAGAATCAGAACTGGTCCGAGGAGGTGGAACAGCTGGCGGCCAAAGTCGAGCTGGCCAAGCCGCTCGTGCTGACCCAGTCGGGCGACGGCCTGCTGAGGGCCGAGCCTCAGTTGCGCCAGCAGCACGGCCGGGGCGAGGGTCGGCCCCACAAGTGCCCCAGCTGCACGGCCGCCTTCATGAAGCTCAGCCACCTGCAGCAGCACTACCGCAAGCACACGGGCGAGCGACCCTTCGTTTGCGAGATTTGCGACAAGCCGTTCATTACGAAGAGTGCGCTGAAGGCTCACTACACGATTCACAACaagacgaaaaatttcaagtgcGTGACGTGCCAAGCGACTTTTTCCAACTCGAGCAGCTTGAAGAGGCACCAAACGACTCACGTGAACAAGCGTCCCTTTATGTGTCCTTACTGCAACAAAACATTCAAGACCAGTGTCAATTGCACCAAGCACATGAAAATACATCAAAAAGAGGTTGCGCAGGAGgttctcgaacaacaaaaaaagcaagCGACTCGGCCACCGACTCCAGTTACTGTACAAGAAAATTTACTTGCCGATAATGAGTACAATATGcctttaattgtaaatataaatcagTCTATGCAACCAGTAACACAAAATCAAAGCCAACCTGTATTCATTGATCCAAAATGCTCTTATCTTAATTCGCCAATTGCTTCAGTATTAAACGAGCCTCAAAACGTCGATGTTGTTTCAAGTCAGAATTCAGTTCTTTCCAATGATCTGAACACTGCCAATTTGTCTAATTTTACCGCGGATACAACGTACACGGTGGAGAACATGCATGAAATTGAATCGTTGCATCAACAATTGTATAACATGGGCTTGAATTTTGGGCTGAATACTCCAGACAAGACAATCGAAGATTCGAATTTCTTGCCAAATAGAGATCAGCATCCAACTTTGAGCATCATTTACGACAATGGCAAAGTTGATTCGTCGGTTGatttgaatacattttcttcTCAACTCGAAAGTCTCGGTATCAATCAGTTGGCATTTGAAGACGTTGGAGATTCCAATGTTACCTTAGCCTCGAACAACACTGCTGCACCTATCAACTTGTGTTCCGAAGTTATggaacaacaacagcagcaacaaaataGTCTCAATGTTTTGGCCTCGCATCAGAATCAAAGTGCCAATCTCAAGCTTCAAAACGTCAATCCGAATATGCAAAGCGCCGCGCCAAAGATAGACGGCTCCGACTTGAATATACAAAGGGCCCTATGTTTAAGCGATAGTAATTTTAGCAACGGCTTTTTGTGCACCTCGCCTATGGATATACTCAATGAGAAGTTCCTCGAGCAAAATGAGGAGTTCATTAGCGAGGATCAAAATCTACAGTGCCATATATGTGATAAGCAGCAATTGTCAGTGAAGGATTTgcaaaaacatttgaaaattcatcagGTTCGAGTCAAGGAGTACGAGTGTTTTCAGTGTTCTTACAAATTTCACTCCAACAGTGGGCTAAGTAGACACATGAAAACTCACAAGAATCAAGAGACCCACAAATGCTACGAGTGCAATCAAGAGTTTCCCACTTCGCTGCAGTTGAGGGAGCACATAAAAGAACACGTAAAATATGAATTGGCACGGAAAAATGCCGCAGGGGACTCGGATGTATCGGTAGACATAGATTTGGGTTCGGATAAGAAAAGTCCCAAATCAAAGAAAAACGTTTGTGATTACTGTTCAAAAATGTTCGGCAAACCCAGCGATCTCGTGAGACACGTAAGAATTCACACTGGTGAAAAGCCCTACAAGTGCGAATATTGCGCCAAGAGTTTCGCCGTCAAATGCACCTTAGTGGCGCACCTGAAAATTCACAACGGCCATAAATCATTTCAGTGTCACGTGTGTAATAGTATGTTCGCCTCGAAAGGTGGTCTCAAAGTGCACATGAGGCTGCACACAGGAGCCAGGCCGTTCGAGTGCAACCAGTGCGGCCTGAAATTCCGAACATCCGGACACCGTAAATTGCACATGCTGACGCACAGTCAAGAAATTCCAAGCATCGTTAATAATAGTAACGCTAGCCAGGCTCAACTGATCGTCGACAACGACATGAGCAATAGTAAGCTCGTTGATCTGCCGATGGTCGAAACGGACGTAGAGAAATTATTGGAAAATAGTCACTGGATGGAGAACTTGAAGTTCTTGATGAATAACGGCTTGGCCAACATTCAAGACGGCCAAAACGAAATTCAAGCTGACCCTGAGCAAGAACAGCAATCCCAAGCCACATCACCTCTCGTTTTCTCAACGTCACTGGACAACGAGCAAAGCCTAGTCGAGGGTGAGAACTGCGTACTGCTCAAGTTACAAGAACCACTGCCAGAACAAATTAATGAAGAAAAGCAAGAAATAGCAACTGGAAGCGGTAAATTACGGCAATGTGTTCAGTGTAGCAAAACATTCTCGAAGCCTTTCCAGCTCGAGCGACACTATCGTGTCCACACCGGGGAACGGCCCTTCATCTGCGACTTGTGCGACAAGTCCTTCACTCAAAAGTCTACGCTCGATCTTCATCGCAAGAGCCACTTGGGCGAGAAGCCGTATTCTTGTCCTCACTGCTCCCGTCATTTCACGCAGTCCTGCAATTTACGCACTCACGTGGGCCGCGTTCACAGGGATAAGTTGGCCGATGCAGCGCAAGAACTTCAAGATGAGCAACAGGAACCACCGCAGTTTGTAACGTACGAATCCAAAGTTGTGCTGCAATCTATTGAAGATTCCGTCATTCAGTTCGATGATTTATCGTTTGCTGATTTATTGGCATGA
Protein Sequence
MLNMFKMSASPLGMNFLLTDDGNTLLAMRQAKDGTLELMSTPVTIVGNTSNQVLQSLTNSMLRFKSNSSDPNSLSVDNVQSKSLHSSHSISINQVHSSNMNSTVSHHLKDFKENIECDDELLEFSQELSCCVRNPPNTQNCDKQYSGKNGKKSTASKKQTKSKSKTKGVKDLYQCDMCAEEFEKYSVYQKHLHDHAFDKAYRCPKCAESFNAPLNFKLHMAIHKLGSPKCPECGRKFSRLASLKTHMRVHEIDENLYCTECDDVFDSKAQQEEHLKLHQEKWTSEEYRNCKLCRKNFTQPALYRQHLRDHYRVQEKYIKQTSRGARLRTSYKCSICFKVFRSPCFLSRHIRVHTRERPYKCKLCQKGFSQKSSLRTHEWTHSGTKPFSCDECQARFAIHSNFRIHVKRHEKNRRNRCRSRAHKSSHCSLAFKEPRVLARHTSRFHNRNVKSAANEQSSNAATIAANSAATENTGQRNEQEQRTQDGEEREQRLEPEQRCQDESAANDNEQEVEQDSQGFESMESDDGVEDDDDDECRRGNRKYVQVNHRIIDGKKVYECLYCDKIAKKPSDIVRHLSTHTGEKPFKCDECNQSFTLKGSLVVHKKKIHGGDAVTCPKCPAEFPNKQALKDHLKTHNKFVCKLCDASFENFEAMREHANEHNTPAEVKNRRRKMEKKISYLTRKPKNQNWSEEVEQLAAKVELAKPLVLTQSGDGLLRAEPQLRQQHGRGEGRPHKCPSCTAAFMKLSHLQQHYRKHTGERPFVCEICDKPFITKSALKAHYTIHNKTKNFKCVTCQATFSNSSSLKRHQTTHVNKRPFMCPYCNKTFKTSVNCTKHMKIHQKEVAQEVLEQQKKQATRPPTPVTVQENLLADNEYNMPLIVNINQSMQPVTQNQSQPVFIDPKCSYLNSPIASVLNEPQNVDVVSSQNSVLSNDLNTANLSNFTADTTYTVENMHEIESLHQQLYNMGLNFGLNTPDKTIEDSNFLPNRDQHPTLSIIYDNGKVDSSVDLNTFSSQLESLGINQLAFEDVGDSNVTLASNNTAAPINLCSEVMEQQQQQQNSLNVLASHQNQSANLKLQNVNPNMQSAAPKIDGSDLNIQRALCLSDSNFSNGFLCTSPMDILNEKFLEQNEEFISEDQNLQCHICDKQQLSVKDLQKHLKIHQVRVKEYECFQCSYKFHSNSGLSRHMKTHKNQETHKCYECNQEFPTSLQLREHIKEHVKYELARKNAAGDSDVSVDIDLGSDKKSPKSKKNVCDYCSKMFGKPSDLVRHVRIHTGEKPYKCEYCAKSFAVKCTLVAHLKIHNGHKSFQCHVCNSMFASKGGLKVHMRLHTGARPFECNQCGLKFRTSGHRKLHMLTHSQEIPSIVNNSNASQAQLIVDNDMSNSKLVDLPMVETDVEKLLENSHWMENLKFLMNNGLANIQDGQNEIQADPEQEQQSQATSPLVFSTSLDNEQSLVEGENCVLLKLQEPLPEQINEEKQEIATGSGKLRQCVQCSKTFSKPFQLERHYRVHTGERPFICDLCDKSFTQKSTLDLHRKSHLGEKPYSCPHCSRHFTQSCNLRTHVGRVHRDKLADAAQELQDEQQEPPQFVTYESKVVLQSIEDSVIQFDDLSFADLLA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01485052;
90% Identity
iTF_01484084;
80% Identity
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