Tpre010874.1
Basic Information
- Insect
- Trichogramma pretiosum
- Gene Symbol
- -
- Assembly
- GCA_000599845.3
- Location
- NW:1534890-1542759[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.14 10 5.7 2.3 14 43 155 181 140 182 0.82 2 10 0.0014 0.11 12.1 0.1 18 43 188 210 184 211 0.93 3 10 0.063 4.7 6.8 1.8 2 43 201 239 200 243 0.84 4 10 0.2 15 5.2 3.5 6 43 234 268 231 269 0.84 5 10 0.048 3.6 7.2 2.1 18 44 275 298 272 298 0.92 6 10 0.026 2 8.0 1.1 18 44 304 327 299 327 0.87 7 10 0.062 4.6 6.8 1.7 18 40 333 362 328 370 0.75 8 10 0.00099 0.074 12.6 0.3 15 44 396 422 390 422 0.91 9 10 0.34 26 4.5 1.3 18 31 428 440 424 453 0.81 10 10 4.3 3.2e+02 0.9 0.9 14 24 454 464 441 466 0.69
Sequence Information
- Coding Sequence
- ATGGAGAGCCGCAGCAACGTAGATAGagaaaagaaagtattGAATAATACTTGTCCAGATGAAGGCGacgattttaatttcaatccGACAGACTCTGTCGAAGCAGAAAACCGTGAAACAAGGTTATTGCCTGAATCATCGaggAAACACTGGAGTGAAACTGCGGAGATAACAGATGAATATATCAGgatagattttgagtgcagaGATGTTGAAAAGGAACTGCCGTCTCTATCAACGACCACCTGCAAGACCGAGAATCAACCTATTGTggaaaaagataaaagtaaaCTTAAGAATTTCGTGAATGAAAAACAAccaataattttgataaaaaaagggtttaattacgataaaaatgGTCAATTCGAAAGTAATCTTTGTCACACATCATTGGCATCGAATGAAGCCGTCAAGTCTCACTTGAAGGTCTCACCTCACATACAGGAGGTACATAATTCTAGTGCACCattcaaatgtaaaatttgccTAAAATCATTCCGACGAAAACgtacattgaaaattcatataaatacagtacacgaaggcAACAAACCCTTCAAGTGCGATATCtgtgaaaaatcgttttcatACAAGGCCAATCTTAAAAGTCACGTAGATACAGTACACTATCGTATGAAATCTTTTGAATGCGACATTTGtagaaaatcatttggacaaaaacaaagCCTCAGTGCTCACATTAAAGCAGTACACCTTCGTAGAAATCCCTTCAAATGTGATAAATGTCACAAAgcatttggatacaagaatTTACTCAAAGGGCACATAATTAAAATGCATGATTGGGGAGAACTTTtccaatgtaaaatttgtcataaatcatttagaTTAAAAAGTAGTCTCAGGGTTCACATAAaatcagtacataatcgtaatAAACCCTTTCAATGCGATATGTGTCACAAGTCATTTTCAATCAAGGGTTATCTCAGCAGACATATAAATTCAGTTCATAATAGTACGAAACCCTTCAAGTGCgaaatttgccacaaatcatttaaatcCAAGAATTATGTCAATGTTCATATTAATGCCTCATTTGGCCGCAAGCATCATCTTCAAAGTCATATAATAACAGTACATGATGATAGCGCTATTAACAAATCAGTTGAACTAGAAAGTACTCGTGAAGCTGAAATTAATACAGCAAGTAATTATGGAAAATTCTTccaatgtgacatttgtcgcAAGTCATTTACAATCAAGGGTAACCTCTACCGTCATATAAATACGGttcataataatacaaaaccCTTCAAGTGCGAAATTTGCAACAAATCATTTAAATACAAGGGATATGGTTACTTCAGGCAacacttttttaataagaaaaaattgctaaCGCCTAACTGCATGTACTGTGGACACGAACGAGACGACGCTGAACATACGTTTTTCCACTGTGTCAAGTGGACAGCTCGGCGTCAGGAACTAGAGTCCGTTTACGGAGAAATCACGCCAGACAACATCATCGGCGTGATGCTCCGGGACAAGGAAACATGGACAACTTTTGTGGTCTTCATCGAAACTGTTCTTAAGCGTAAGAAAGCTGATGGATGTCTGAGGGATAAATGA
- Protein Sequence
- MESRSNVDREKKVLNNTCPDEGDDFNFNPTDSVEAENRETRLLPESSRKHWSETAEITDEYIRIDFECRDVEKELPSLSTTTCKTENQPIVEKDKSKLKNFVNEKQPIILIKKGFNYDKNGQFESNLCHTSLASNEAVKSHLKVSPHIQEVHNSSAPFKCKICLKSFRRKRTLKIHINTVHEGNKPFKCDICEKSFSYKANLKSHVDTVHYRMKSFECDICRKSFGQKQSLSAHIKAVHLRRNPFKCDKCHKAFGYKNLLKGHIIKMHDWGELFQCKICHKSFRLKSSLRVHIKSVHNRNKPFQCDMCHKSFSIKGYLSRHINSVHNSTKPFKCEICHKSFKSKNYVNVHINASFGRKHHLQSHIITVHDDSAINKSVELESTREAEINTASNYGKFFQCDICRKSFTIKGNLYRHINTVHNNTKPFKCEICNKSFKYKGYGYFRQHFFNKKKLLTPNCMYCGHERDDAEHTFFHCVKWTARRQELESVYGEITPDNIIGVMLRDKETWTTFVVFIETVLKRKKADGCLRDK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01485384;
- 90% Identity
- iTF_01485384;
- 80% Identity
- iTF_01485384;