Basic Information

Insect: Trichogramma pretiosum
Gene Symbol: -
Assembly: GCA_000599845.3
Location: NW:574983-577049[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 1.2 92 2.7 1.2 29 44 153 169 144 173 0.80

2 9 0.81 60 3.3 7.4 18 43 174 196 168 197 0.86

3 9 0.25 19 4.9 0.3 19 32 203 216 201 229 0.72

4 9 5.9 4.4e+02 0.5 3.5 19 43 231 252 219 253 0.84

5 9 0.045 3.3 7.3 2.6 18 44 258 281 256 281 0.94

6 9 0.055 4.1 7.0 0.9 15 43 283 308 282 309 0.86

7 9 0.00017 0.013 15.0 1.9 19 44 315 337 312 337 0.94

8 9 0.029 2.2 7.9 0.7 19 43 343 364 341 365 0.83

9 9 0.0022 0.16 11.5 3.5 18 44 370 393 368 397 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	1.2	92	2.7	1.2	29	44	153	169	144	173	0.80
2	9	0.81	60	3.3	7.4	18	43	174	196	168	197	0.86
3	9	0.25	19	4.9	0.3	19	32	203	216	201	229	0.72
4	9	5.9	4.4e+02	0.5	3.5	19	43	231	252	219	253	0.84
5	9	0.045	3.3	7.3	2.6	18	44	258	281	256	281	0.94
6	9	0.055	4.1	7.0	0.9	15	43	283	308	282	309	0.86
7	9	0.00017	0.013	15.0	1.9	19	44	315	337	312	337	0.94
8	9	0.029	2.2	7.9	0.7	19	43	343	364	341	365	0.83
9	9	0.0022	0.16	11.5	3.5	18	44	370	393	368	397	0.93

Sequence Information

Coding Sequence: ATGAAATCTAGCGGTTTGTTCAATTGTgctgtcagAATTAAAGAAGAGCCTGCTGACAATGTAtcactttttgaaaatgattccGAAATGAATGACGAGGAACCTGATCTTAAAAACTTCCAACTCTTACCAATGTCgcaagaaaattcaaCCCATacaattcgaaaaaatgacgTAAATCATAGAAGTGGACTTTGTGACGAAGTGAAAATAGTTATTGAATGTGAAAACGTGAAGCCCAATATGGATTTATTAgtagttcaaaaaattgatgattattCTCGAAATCACTTGCAAGATATGAAATATAACGATGACAATGCAATTGAAAACTCAATTGAAATAGAAACcacagaaaaattaaaacaaaaatttgttgGTGATGCTgaaaaagaattgaatttgaatatccacaataaatttgttgaaaaaaataaaaaaagaagaattacaaaaaagtttaagaacgaacataacctcaaaacacacaTCGATACGGTTCATAATAAAACAACCCACATgtgtaaaatatgtaaaaagaaTTTCTCAACTATGGGTAATCTAAACAGGCATGTCAAATCATTACATCATGGTATTACACACTCATGTGATTTATGcggcaagaaattttcattcaaaggTAATGTCCAAGTCCACATCAATAAGGTGCACAATCGTATCACACACTCATGTGATTTATGTAGCAAGACATTTTCATGCAAAGGTAATCTCcaaatccacatcgattcagttcataatggtgtcactcatacatgtgacaattgcagaaagaaattcacaagcaagagtaatctcaaaatccacatagATTCGGTGCATAACGGTAAGAAACATACGTGTGACACGTGTGGAAAGAAGTACGgacgaaaaattaatctcgCGGCCCACATCGATGTAGCACACAATGGTATCactcatgcatgtgatatttgcggaaagaaatactcaattaaaaaaaatctcaaaaatcacattgaAGTCGCACATAATGGTGTTACTCACTCATGTAATTTATGTggcaagacattttcatgGAAAGGTAATCTCcaaatccacatcgattcggttcATAATGGTGTTACTCCTACATGTGATtattgcggaaagaaattcacaagcaagagtaatctcaaaattcacatacatacaatacaTAACAGTAACAAACATTCGTGTCGTGCGTGGAAAAAAGTACGGACGAAAAAGTAA
Protein Sequence: MKSSGLFNCAVRIKEEPADNVSLFENDSEMNDEEPDLKNFQLLPMSQENSTHTIRKNDVNHRSGLCDEVKIVIECENVKPNMDLLVVQKIDDYSRNHLQDMKYNDDNAIENSIEIETTEKLKQKFVGDAEKELNLNIHNKFVEKNKKRRITKKFKNEHNLKTHIDTVHNKTTHMCKICKKNFSTMGNLNRHVKSLHHGITHSCDLCGKKFSFKGNVQVHINKVHNRITHSCDLCSKTFSCKGNLQIHIDSVHNGVTHTCDNCRKKFTSKSNLKIHIDSVHNGKKHTCDTCGKKYGRKINLAAHIDVAHNGITHACDICGKKYSIKKNLKNHIEVAHNGVTHSCNLCGKTFSWKGNLQIHIDSVHNGVTPTCDYCGKKFTSKSNLKIHIHTIHNSNKHSCRAWKKVRTKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01485430;
90% Identity: iTF_01485430;
80% Identity: iTF_01485430;