Basic Information

Insect: Trichogramma pretiosum
Gene Symbol: -
Assembly: GCA_000599845.3
Location: NW:173626-175718[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 5.2 3.9e+02 0.7 3.3 18 43 159 181 144 182 0.83

2 14 1.6 1.2e+02 2.3 0.3 19 29 188 198 185 210 0.77

3 14 0.0006 0.044 13.3 0.5 17 44 214 238 199 238 0.85

4 14 0.97 72 3.0 1.5 18 37 243 259 242 270 0.74

5 14 0.013 1 9.0 1.0 16 44 269 294 257 294 0.79

6 14 0.091 6.8 6.3 1.2 19 44 300 322 297 322 0.93

7 14 0.13 10 5.8 0.8 19 43 328 351 324 354 0.86

8 14 0.012 0.93 9.1 0.4 18 44 355 378 351 378 0.92

9 14 1.1 84 2.8 0.9 17 43 382 405 379 410 0.77

10 14 0.039 2.9 7.5 2.5 18 44 411 434 396 434 0.90

11 14 0.41 30 4.2 2.8 19 43 440 461 438 462 0.87

12 14 0.0018 0.13 11.8 0.5 19 44 468 490 465 490 0.95

13 14 0.053 3.9 7.1 0.8 19 43 496 517 493 525 0.77

14 14 2.2 1.7e+02 1.9 1.3 19 44 524 546 519 546 0.86

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	5.2	3.9e+02	0.7	3.3	18	43	159	181	144	182	0.83
2	14	1.6	1.2e+02	2.3	0.3	19	29	188	198	185	210	0.77
3	14	0.0006	0.044	13.3	0.5	17	44	214	238	199	238	0.85
4	14	0.97	72	3.0	1.5	18	37	243	259	242	270	0.74
5	14	0.013	1	9.0	1.0	16	44	269	294	257	294	0.79
6	14	0.091	6.8	6.3	1.2	19	44	300	322	297	322	0.93
7	14	0.13	10	5.8	0.8	19	43	328	351	324	354	0.86
8	14	0.012	0.93	9.1	0.4	18	44	355	378	351	378	0.92
9	14	1.1	84	2.8	0.9	17	43	382	405	379	410	0.77
10	14	0.039	2.9	7.5	2.5	18	44	411	434	396	434	0.90
11	14	0.41	30	4.2	2.8	19	43	440	461	438	462	0.87
12	14	0.0018	0.13	11.8	0.5	19	44	468	490	465	490	0.95
13	14	0.053	3.9	7.1	0.8	19	43	496	517	493	525	0.77
14	14	2.2	1.7e+02	1.9	1.3	19	44	524	546	519	546	0.86

Sequence Information

Coding Sequence: ATGAAAGAGGAACCTAGTGGCGAGTGCCGTAGTGAAAATAATTCGGAGATGGTGGATGAAAAGCCCGATCTTAAAAACTATCAACCATTTCCAccagaaaattcaGTCCATACCTTTCGAAAAAGTGACTTGAATCATCCACGTGAATTTAATGACGATGTGGAAATAGTCGTTGAGTGTGAAGACGTCAAGCCCAACATTAATTTATTAGCAGttaagaaaattgaagaagatTCTCAAAATGGCTTGAAAGACATGGAGTACAATAATGTTTATGCAACTCAAAATATGATTAAAATGGAACCCACGGAGGAAGTACAACAGGCATCTTTTGTGAACACCGTAGAAGAATTAACTTTGAATTCAGACTGTAAACGTGGcgagcaaaataaaacaagaaaaataacgaaagAGTTGAGCAacgaacataacctcaaaagaCACCAAAGTACGGTGCGTAATGATCCAACTTACATGTGTGAAATATGCGGAAAATATTTCGCACATAAGGCAAGTTTGGACAGGCATATCAAATCAATACATCATGGTATTACCCActcatgtgatatatgcggaaagtcTTTTACTCAAAAAAGTTGGGTCAAAGTCCACATTAATGCAGTCCACAAGGGTTTCAcatatgcatgtgatatatgccaaaagacattctcataTAAGAACAATCTcgaaaaacacatcgattcggtgcataatggtgttgGACATGaatgcgatatatgccaaaagacattctcacaCAAGGGTTatctaaaaaaacatattgatTTCGTGCACAATCAAGTCcgacatgcatgtgatatatgccaaaagacgtTCACAACGAAAgataatctcaaaatccacatcgaatCGGTGCATCAAAAAATCACGCATccatgtgatatatgccaaaagaaattctcaaccAAGAGTTATCTCAGAAATCACATTggttcggtgcataatggtgtcagaCATGCTTGCGACATTTGCGGAAATGTGTATAAACTAAGAATTGGTTTCAAACGCCACATGGATTTGGTGCATAATCATGTCAGACACGAATGCGAtgtttgcggaaagaaattcgtacaaaaaggtaatctcaaaacccacatcgattcagtgcataataaaatcatgcaCACATGTGACagatgccaaaagacattctcacaAAAAGGTTATTTCAAAActcacatcgattcagtgcataatggtgtccgTCATGCATGCGACatttgcggaaagaagttCACAGAGAAGAAACATCTTAAAaatcacatcgattcggtgcataatggtgtctgtcatgcatgtgatatttgcgaaaagacattcacacagaAGGGTcatctcaaaacccacatcgagTCGGTACATCATAAAATTACGCACCCATGTGAtaaatgccaaaagacattctcagacaAGAGTGGTCTCAGAAAGCACATCgtttcggtgcataatggtgtcagaCATGCTTGCGACATTTGCGGAAATGTGTATAAACGAAGAATTAGTTTCAAACGCCACATGGATTTGGTGCATAACGATGTcagacatgcatgtgatacTTGTGGAAatacattcacacaaaaaggtcatctcaaaattcatatCAATAGGGTGCATAGCTGA
Protein Sequence: MKEEPSGECRSENNSEMVDEKPDLKNYQPFPPENSVHTFRKSDLNHPREFNDDVEIVVECEDVKPNINLLAVKKIEEDSQNGLKDMEYNNVYATQNMIKMEPTEEVQQASFVNTVEELTLNSDCKRGEQNKTRKITKELSNEHNLKRHQSTVRNDPTYMCEICGKYFAHKASLDRHIKSIHHGITHSCDICGKSFTQKSWVKVHINAVHKGFTYACDICQKTFSYKNNLEKHIDSVHNGVGHECDICQKTFSHKGYLKKHIDFVHNQVRHACDICQKTFTTKDNLKIHIESVHQKITHPCDICQKKFSTKSYLRNHIGSVHNGVRHACDICGNVYKLRIGFKRHMDLVHNHVRHECDVCGKKFVQKGNLKTHIDSVHNKIMHTCDRCQKTFSQKGYFKTHIDSVHNGVRHACDICGKKFTEKKHLKNHIDSVHNGVCHACDICEKTFTQKGHLKTHIESVHHKITHPCDKCQKTFSDKSGLRKHIVSVHNGVRHACDICGNVYKRRISFKRHMDLVHNDVRHACDTCGNTFTQKGHLKIHINRVHS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01485108;
90% Identity: iTF_01485108;
80% Identity: iTF_01485108;