Basic Information

Insect: Trichogramma pretiosum
Gene Symbol: -
Assembly: GCA_000599845.3
Location: NW:331040-335526[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.13 9.6 5.8 2.4 16 43 191 215 183 216 0.78

2 16 1.3 95 2.6 2.2 18 43 221 243 217 244 0.89

3 16 0.019 1.5 8.4 1.8 10 43 243 271 237 272 0.82

4 16 0.006 0.44 10.1 3.7 5 43 265 299 262 300 0.73

5 16 0.7 52 3.5 4.8 16 39 303 323 299 328 0.74

6 16 0.01 0.74 9.4 0.3 18 44 333 356 332 356 0.86

7 16 0.15 11 5.6 0.3 19 44 362 384 359 384 0.93

8 16 0.16 12 5.5 0.1 19 43 390 411 389 416 0.80

9 16 0.079 5.9 6.5 3.1 18 43 417 439 411 444 0.87

10 16 0.55 41 3.8 3.7 19 43 446 467 438 468 0.84

11 16 0.01 0.75 9.4 1.4 18 43 473 495 463 496 0.87

12 16 1.5 1.1e+02 2.4 4.4 17 43 528 551 514 557 0.73

13 16 0.39 29 4.3 0.2 18 44 557 580 553 580 0.91

14 16 0.33 24 4.5 0.8 18 44 613 636 596 636 0.81

15 16 0.0022 0.17 11.5 1.3 17 44 640 664 636 664 0.89

16 16 0.056 4.2 7.0 1.5 19 44 670 692 667 692 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.13	9.6	5.8	2.4	16	43	191	215	183	216	0.78
2	16	1.3	95	2.6	2.2	18	43	221	243	217	244	0.89
3	16	0.019	1.5	8.4	1.8	10	43	243	271	237	272	0.82
4	16	0.006	0.44	10.1	3.7	5	43	265	299	262	300	0.73
5	16	0.7	52	3.5	4.8	16	39	303	323	299	328	0.74
6	16	0.01	0.74	9.4	0.3	18	44	333	356	332	356	0.86
7	16	0.15	11	5.6	0.3	19	44	362	384	359	384	0.93
8	16	0.16	12	5.5	0.1	19	43	390	411	389	416	0.80
9	16	0.079	5.9	6.5	3.1	18	43	417	439	411	444	0.87
10	16	0.55	41	3.8	3.7	19	43	446	467	438	468	0.84
11	16	0.01	0.75	9.4	1.4	18	43	473	495	463	496	0.87
12	16	1.5	1.1e+02	2.4	4.4	17	43	528	551	514	557	0.73
13	16	0.39	29	4.3	0.2	18	44	557	580	553	580	0.91
14	16	0.33	24	4.5	0.8	18	44	613	636	596	636	0.81
15	16	0.0022	0.17	11.5	1.3	17	44	640	664	636	664	0.89
16	16	0.056	4.2	7.0	1.5	19	44	670	692	667	692	0.93

Sequence Information

Coding Sequence: ATGTTGAAAGAGGAACCTTATGAAGTGTCGTTGGATGAATGTGGAGATGGAATAATGAATGAGCCAATTGATCATAAAAATGTCCAACAATTGCCTTTTCAAGATAATTTGGTCCTTCGGATTCCAAGATGCGACGATATGATGATTGAATTCGAATGTCAAGATGTAAAGCCCGATAAGAATTTATTGCTACCAAAGAAAATGGATTtacacaaaattaaaaaagaaccCCCAGAGAATTTGGAAGAAGAAATCATCGACGACATGGCCGAGGAATCGAATCCGAACGGTGAACTCAATAACGACATAGAAATTGAATTCGAATGTCAAGACGAGAAGCCTAGTGTGGATTTCTTAGTAGGGCATAAAAGTGATGATAACTCTGGAAATCAATTAcagaatgataaaaatagtcataaaagtcaaaatattatgaaagcAGAAATTAAGAAGGAAGTAAAGGAAGATATTCTTAGCGACGTTCCAGAGGAATTAAATTTGGACTCTGAGGGGgttgaacaaaatgaaaataatcaacgCAGTCTCAGGGCACACAGTGACAGTGGTAGCAACTACGCATGTGAAATatgtggaaaaaattatttaagaaaaCATCATCTCCAAATCCACATCGATACAATGCATAGTAACATCACTTATAAATGTGatgtatgcgaaaaaaaattcgcttgTAAAAGTTATCTCCGAAGTCACATTTTGAGGATACACAGCGAAATCAAACTTATATGTGACATATGCGGAAAGGAATACTCTACGATTGGTGAGCTAAAAAACCACATAGATTCGATACATAATGGTAAGAGATATACATGCAATCtgtgcggaaagacattccAGCGCAAAGACAGTATCGGAACCCACATCAATAGAGCGCATAAAGGTATCAAACATAAATGCGGTACGTGTGGGAAAACATATTCAGCTAAGAGTCATCTCCAActccacatcgattcgatacATAATGGTATCGGGCCCAAATGTGAAATATGTGGAAAGATATTTTCACGCTATTTAACTATGCAACgccacatcgattcgattcATAAAGGTATCACTAAGTCATGCAAAATATGTGGAAGGGCATTTCCTCTTCAAACTAATCTCAAATTACACATGGATTCTGTGCACAAAGGTATTGACCATCCGTGTGatgtatgcggaaagaaattcaaacGAAAAGATTCCCTCCAAGAACATATAGATTCggttcataataaaatcactcatACGTGTGCCatatgcggaaagacataCAGACGGAAGGATTCCCTCAAAGAACACATTGATTCGATTCATAGGGAAATAACCCATGCGTGTGaaatatgtaaaaagaaatttaaacgCAAGGACCACCTCAAAGTCCATATCGATTCggaacataataaaataactcatAAATGTGATATATGTGGAAACACATTCAAAAGCAGAACCAATCTCACAGTCCACATCAATTCGATCCATATGGGCGTTACTCATTCATGCGATACGTGTGGTAAGAAATTCGCATCGAATGGTTATCTccaaattcacatcgatgcatCGCATAATAAAGTCACTTATGAATGCGATATATGCAAAAAGAAGTTTGCgcataaaaattctctcaaACTCCACATCGAATCGATACATATGGGCAGGAGACATAAATGCGGTGAGTGCggacaaaaatttaaagtcaGTAGTgctctcaaaatccacatagAATCAGTGCATAGTAACATTACTCATGAATGTGATGAATGCAAAAAGACATTCGCCTGTAAAAATTATCTCCGATTGCACACCGATgcggtgcataataaaattacttacgCATGCGCTTTATGCGGTACGAAATTCAAGGCTAAGCCTTATCTAAAAAGGCACATCGATACGCAGCATAATAAAAACTCCCACGCATGTGACAGATGCGAGAAGACATTTAAACGAAAGGAtaatctcaaaaatcacatcgatACGCAGCATAATAAAATCTCCCACGCATGTGACAGATGCGAGAAGACATTTAAACGAAAAGATGCtctcaaaaagcacatcgATACAAAGCATAAAAGTAAAACGCGCAtggtaaaagtgaaaaaattaaaaccaaaGGATTAA
Protein Sequence: MLKEEPYEVSLDECGDGIMNEPIDHKNVQQLPFQDNLVLRIPRCDDMMIEFECQDVKPDKNLLLPKKMDLHKIKKEPPENLEEEIIDDMAEESNPNGELNNDIEIEFECQDEKPSVDFLVGHKSDDNSGNQLQNDKNSHKSQNIMKAEIKKEVKEDILSDVPEELNLDSEGVEQNENNQRSLRAHSDSGSNYACEICGKNYLRKHHLQIHIDTMHSNITYKCDVCEKKFACKSYLRSHILRIHSEIKLICDICGKEYSTIGELKNHIDSIHNGKRYTCNLCGKTFQRKDSIGTHINRAHKGIKHKCGTCGKTYSAKSHLQLHIDSIHNGIGPKCEICGKIFSRYLTMQRHIDSIHKGITKSCKICGRAFPLQTNLKLHMDSVHKGIDHPCDVCGKKFKRKDSLQEHIDSVHNKITHTCAICGKTYRRKDSLKEHIDSIHREITHACEICKKKFKRKDHLKVHIDSEHNKITHKCDICGNTFKSRTNLTVHINSIHMGVTHSCDTCGKKFASNGYLQIHIDASHNKVTYECDICKKKFAHKNSLKLHIESIHMGRRHKCGECGQKFKVSSALKIHIESVHSNITHECDECKKTFACKNYLRLHTDAVHNKITYACALCGTKFKAKPYLKRHIDTQHNKNSHACDRCEKTFKRKDNLKNHIDTQHNKISHACDRCEKTFKRKDALKKHIDTKHKSKTRMVKVKKLKPKD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01485063;
90% Identity: iTF_01485063;
80% Identity: iTF_01485063;