Basic Information

Insect: Trichogramma pretiosum
Gene Symbol: -
Assembly: GCA_000599845.3
Location: NW:338307-341528[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.00052 0.039 13.5 3.6 10 44 153 184 150 184 0.93

2 23 1.7 1.2e+02 2.3 0.4 19 40 190 208 187 212 0.71

3 23 0.042 3.2 7.4 3.2 12 43 212 240 201 245 0.82

4 23 2.5 1.9e+02 1.7 0.6 19 44 247 269 243 269 0.89

5 23 0.91 68 3.1 0.1 19 29 275 285 272 297 0.78

6 23 0.16 12 5.5 1.6 18 43 303 325 290 329 0.79

7 23 0.026 1.9 8.0 0.5 19 44 332 354 329 354 0.88

8 23 1.4 1e+02 2.5 7.0 15 44 357 383 348 383 0.86

9 23 0.019 1.4 8.5 0.4 14 43 526 552 520 553 0.81

10 23 0.038 2.9 7.5 0.2 19 44 559 581 555 581 0.93

11 23 0.84 63 3.2 0.7 18 44 587 610 582 610 0.89

12 23 0.0048 0.36 10.4 0.1 19 43 616 637 613 638 0.90

13 23 0.048 3.6 7.2 0.8 19 44 645 667 639 667 0.91

14 23 0.17 13 5.4 0.1 19 44 673 695 670 695 0.88

15 23 0.059 4.4 6.9 2.8 15 44 698 724 689 724 0.87

16 23 0.084 6.3 6.4 0.3 19 43 730 751 727 752 0.77

17 23 0.036 2.7 7.6 1.5 14 43 754 780 745 782 0.81

18 23 2.6 1.9e+02 1.6 0.3 19 29 787 797 784 809 0.80

19 23 0.56 42 3.8 1.4 10 43 807 837 802 838 0.76

20 23 6.6 4.9e+02 0.3 0.2 19 29 844 854 839 866 0.79

21 23 0.16 12 5.5 1.5 18 44 872 895 860 895 0.91

22 23 1.3 1e+02 2.6 0.8 19 35 901 914 898 923 0.77

23 23 2 1.5e+02 2.0 0.4 18 31 929 942 916 952 0.80

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.00052	0.039	13.5	3.6	10	44	153	184	150	184	0.93
2	23	1.7	1.2e+02	2.3	0.4	19	40	190	208	187	212	0.71
3	23	0.042	3.2	7.4	3.2	12	43	212	240	201	245	0.82
4	23	2.5	1.9e+02	1.7	0.6	19	44	247	269	243	269	0.89
5	23	0.91	68	3.1	0.1	19	29	275	285	272	297	0.78
6	23	0.16	12	5.5	1.6	18	43	303	325	290	329	0.79
7	23	0.026	1.9	8.0	0.5	19	44	332	354	329	354	0.88
8	23	1.4	1e+02	2.5	7.0	15	44	357	383	348	383	0.86
9	23	0.019	1.4	8.5	0.4	14	43	526	552	520	553	0.81
10	23	0.038	2.9	7.5	0.2	19	44	559	581	555	581	0.93
11	23	0.84	63	3.2	0.7	18	44	587	610	582	610	0.89
12	23	0.0048	0.36	10.4	0.1	19	43	616	637	613	638	0.90
13	23	0.048	3.6	7.2	0.8	19	44	645	667	639	667	0.91
14	23	0.17	13	5.4	0.1	19	44	673	695	670	695	0.88
15	23	0.059	4.4	6.9	2.8	15	44	698	724	689	724	0.87
16	23	0.084	6.3	6.4	0.3	19	43	730	751	727	752	0.77
17	23	0.036	2.7	7.6	1.5	14	43	754	780	745	782	0.81
18	23	2.6	1.9e+02	1.6	0.3	19	29	787	797	784	809	0.80
19	23	0.56	42	3.8	1.4	10	43	807	837	802	838	0.76
20	23	6.6	4.9e+02	0.3	0.2	19	29	844	854	839	866	0.79
21	23	0.16	12	5.5	1.5	18	44	872	895	860	895	0.91
22	23	1.3	1e+02	2.6	0.8	19	35	901	914	898	923	0.77
23	23	2	1.5e+02	2.0	0.4	18	31	929	942	916	952	0.80

Sequence Information

Coding Sequence: ATGGAGTCCCGTACATTCAACTATGCTGctgaAGTGAAAGAAGAATTCAATGATATGCATTATTACGAAAATGATAGTGGTGAAACGGAAGAACAATCAACCGATACTAAAAATTTGCAATTGCTCAGATGTCTGCAAGAGAATACCAATAATACGCTTGAAGAGCACAAAGGAATCGATGAATTTCAACCTAACCAAGGTATTAAAATAGAAttcgagtgcaaagatgtgAAACCCGATGTAAACTTATTAGTACCTGTTAAAGTGAATGCTTGTTCTTATGGGTTTGATGAATATGATGATGTAAAAATTAGCGAAAATCTTGCAACTCATTCCTCGATTAAAGTAGAAACTGAGAGCATAATCAAAGAAGAATTTTACAGCGATACTATGAAAACTATAGATTTAGATACTGGAAGTAAACTGAACGGACAGAAAATGAAGATGTGTCCTTtagtaaagagaaaaaaacaatctaTGCAATGCAAGttgtgtttgaaaaaattttcttcaaaacgAAATCTAGAGAGACATATTGATACGGTGCATAAGTGTATCTCTTACCCGTGTGACATTTGTGGAAAATCATTTAAAGGCAAAGCTttcctcaaaattcacattaaTTCATTGCATAATCGTCAAAAATCTTACAACTGCGATATATGCGAAAAGTCGTTTGTGCGTAAGCATGGTTTGAGAGTTCATATTGATTCGATACATAATCATATCAATCATCCATGTCACACGTGCGAAAAgtcattttcattcaagagTGCTCTGAAAACTCACATTGATATGGTGCATAAACGTATCACTTACCCATGTGACTTTTGTAAAAAGACATTCTCACAAAAAAGTTATCTTGGAGTTCATATCGACTCATTGCACAATGGTCGAAAACCTTACAACTGTGATAtatgtggaaagtcattttcCCATAAGGGTACTATGAAAACTCATATTGATAATGTGCATAATCTTATTGCTTGCCCGTGTAACATTtgtggaaagtcattttcatacaatagttatctcaaaattcacattgattcagtgcataatggtcGAAAATCTCACCACTGCGATATATGCGGGAAGTCATTTAAACAAAAGAGTCATCTGAAAACACATATTAATTCGATACATAAACGTATCTCTCACCCGTctgatatttgtaaaaagacATACGCTCATACGCTCGAAGAACACAGAGAAATGAATGATTTTCAATCTaaccaagaaattaaaatagagTTTGAGTGCGAAGATGAAAAATCCGATGTAAATTTATTAGTAACTGCTGAAGCGAGCGAAAgaattcatgaatttcaacctaaccaagaaattaaaatagagTTTGAGTGCAAAGACGTGAAACCAGCTGTGAATTTATTAGTACCCAATAAAGTAAACGATTGGTCGAACGATTTTGCTACTAATTCctcaattaaaatagaaactgAGAGCATAGTCAAGAAAGAGTTTCTCAgcgatattataaaaagtatagatTTCAATACTGGAAGCGAACTCCATGGAAAGGATACCAAAATTAGTCCTCAAATAGAGAAACCCCAAAAATCTAATCAATGTgagaaatgttttaaaaatttttcttcaaaaaacaGTTTGAAAAACCACATTGATATGGTGCATAAACGTATCACTTACCCGTGTGACATTTgtgaaaagaattttaaaatcaaaaattatctGAAGTCACAtattgattcagtgcataatggtcGAAAATCTCACAGCTGCGATAcatgcggaaagtcatttgtacaaaaaagtgCTTTTAAATTACACATTGATTCTAAGCATAATCGTATCAGTTACCCATGTGGCATTTGTGGAAAAACATTTGTAAATACAAGTAATCTCAAAGTGCATACGGATTCAGTGCATGATAATCGAAAACCTCACAGCTGCGATGtatgcggaaagtcatttgcacaaaaaagtaatctgaAAAATCACATTGATATGGTGCATAAACGTATTGCTTACCCGTGTGACATTtgtggaaagtcattttcatacaatagttatctcaaaattcacattgattcagtacataatggtcGAAAATCTCACAACTGCGATATATGCGGGAAGTCATTTACACTAAAGAGTAATCTGGAAACACATATTAATTCGATACATAAACGTATCTCTTACccgtgtgatatttgtaaaaagacATTTTCCTATAAGGGTAGTCTCAAATTTCATAttgattcagtacataatggtcGAAAATCGCACAACTGCGATGtatgcggaaagtcatttgtacaaaaaagtaatctgaAAAATCACATTGATGTGGTGCATAATTGTATTGCTTACTCGTGTGACATTTGTGAAAAGTCATTTACAAATAAGGGTTATCTCACAGTACATATCGATTCATTGCATACTGATCGCAACCCTCACAGCTGCAATAcatgcggaaagtcattttcatTCAAGCGTGCTCTGAAAATCCATATTGATACGGTGCACAAACGTATCACTTACGCGTGTGACATTTGTGAAAAGTCATTTACAACTAAGGGTTATCTCAGAATACATATCGATTCACTGCATAATGGTCGAAATCCTCACAGCTGCAATAcatgcggaaagtcatttgtacaaaaaagttCTTTAAAATTACACATTGATTCTATGCATAAACTTATCAATTTCCCATGTCACAAGTGTGGAAAAACATTTGTAAATAAGGGTAATCTCAAAGTACATACGGATTCAGTGCATGATAATCGAAAACCTCACAGCTGCGATGTATGCGGGAAGTCATTTGTACGAAAAGGTTCTCTGAAAATCCATTTTGATACGGTGCATAATTGA
Protein Sequence: MESRTFNYAAEVKEEFNDMHYYENDSGETEEQSTDTKNLQLLRCLQENTNNTLEEHKGIDEFQPNQGIKIEFECKDVKPDVNLLVPVKVNACSYGFDEYDDVKISENLATHSSIKVETESIIKEEFYSDTMKTIDLDTGSKLNGQKMKMCPLVKRKKQSMQCKLCLKKFSSKRNLERHIDTVHKCISYPCDICGKSFKGKAFLKIHINSLHNRQKSYNCDICEKSFVRKHGLRVHIDSIHNHINHPCHTCEKSFSFKSALKTHIDMVHKRITYPCDFCKKTFSQKSYLGVHIDSLHNGRKPYNCDICGKSFSHKGTMKTHIDNVHNLIACPCNICGKSFSYNSYLKIHIDSVHNGRKSHHCDICGKSFKQKSHLKTHINSIHKRISHPSDICKKTYAHTLEEHREMNDFQSNQEIKIEFECEDEKSDVNLLVTAEASERIHEFQPNQEIKIEFECKDVKPAVNLLVPNKVNDWSNDFATNSSIKIETESIVKKEFLSDIIKSIDFNTGSELHGKDTKISPQIEKPQKSNQCEKCFKNFSSKNSLKNHIDMVHKRITYPCDICEKNFKIKNYLKSHIDSVHNGRKSHSCDTCGKSFVQKSAFKLHIDSKHNRISYPCGICGKTFVNTSNLKVHTDSVHDNRKPHSCDVCGKSFAQKSNLKNHIDMVHKRIAYPCDICGKSFSYNSYLKIHIDSVHNGRKSHNCDICGKSFTLKSNLETHINSIHKRISYPCDICKKTFSYKGSLKFHIDSVHNGRKSHNCDVCGKSFVQKSNLKNHIDVVHNCIAYSCDICEKSFTNKGYLTVHIDSLHTDRNPHSCNTCGKSFSFKRALKIHIDTVHKRITYACDICEKSFTTKGYLRIHIDSLHNGRNPHSCNTCGKSFVQKSSLKLHIDSMHKLINFPCHKCGKTFVNKGNLKVHTDSVHDNRKPHSCDVCGKSFVRKGSLKIHFDTVHN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01485035;
90% Identity: iTF_01485035;
80% Identity: iTF_01485035;