Basic Information

Insect: Trichogramma pretiosum
Gene Symbol: -
Assembly: GCA_000599845.3
Location: NW:1245693-1248196[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.007 0.52 9.9 1.2 15 42 221 245 214 247 0.72

2 14 0.0014 0.11 12.1 1.3 19 44 253 275 249 279 0.90

3 14 2.8 2e+02 1.6 7.0 14 39 276 298 272 307 0.76

4 14 1.3 95 2.6 3.6 13 43 303 330 294 331 0.77

5 14 2.1 1.5e+02 2.0 3.0 15 31 380 396 374 405 0.77

6 14 0.31 23 4.6 2.1 19 44 412 434 409 434 0.93

7 14 1.8e-05 0.0014 18.1 0.2 17 44 438 462 436 462 0.93

8 14 0.039 2.9 7.5 1.8 15 43 464 489 462 490 0.79

9 14 0.055 4.1 7.0 4.6 14 43 491 517 483 518 0.85

10 14 3.4 2.5e+02 1.3 5.5 15 43 520 545 517 546 0.85

11 14 0.029 2.2 7.9 1.4 15 43 548 573 545 574 0.83

12 14 0.0069 0.52 9.9 4.1 6 43 568 601 564 602 0.83

13 14 0.36 27 4.4 2.5 14 29 603 618 596 631 0.73

14 14 0.046 3.4 7.3 5.0 13 44 630 658 623 658 0.86

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.007	0.52	9.9	1.2	15	42	221	245	214	247	0.72
2	14	0.0014	0.11	12.1	1.3	19	44	253	275	249	279	0.90
3	14	2.8	2e+02	1.6	7.0	14	39	276	298	272	307	0.76
4	14	1.3	95	2.6	3.6	13	43	303	330	294	331	0.77
5	14	2.1	1.5e+02	2.0	3.0	15	31	380	396	374	405	0.77
6	14	0.31	23	4.6	2.1	19	44	412	434	409	434	0.93
7	14	1.8e-05	0.0014	18.1	0.2	17	44	438	462	436	462	0.93
8	14	0.039	2.9	7.5	1.8	15	43	464	489	462	490	0.79
9	14	0.055	4.1	7.0	4.6	14	43	491	517	483	518	0.85
10	14	3.4	2.5e+02	1.3	5.5	15	43	520	545	517	546	0.85
11	14	0.029	2.2	7.9	1.4	15	43	548	573	545	574	0.83
12	14	0.0069	0.52	9.9	4.1	6	43	568	601	564	602	0.83
13	14	0.36	27	4.4	2.5	14	29	603	618	596	631	0.73
14	14	0.046	3.4	7.3	5.0	13	44	630	658	623	658	0.86

Sequence Information

Coding Sequence: ATGGCATGTAGTGGTTCGTTCAACAGCGATGTCAGGGTGAAGGAGGAGCCTGGCGAAGAGTTGCTCAGAggaaataattatgaaatcaTTGATGAAACATACGATCTTGAAAACTTGAAAGATTTACCACTTCTTccagaaaattcaACCCTCGTGCTTCGAAAATGTGACGcaaatcatgaaaatgaatttgaagACAAAGTGGAAGTAGTCGCTGAATACGAAGAATTTAAGCCCAACATTAAATCATTAACAGTAAACAAAATTGACGATGATTCTCTAAATCACTTGCGGAATGTAAAAGATAGCAATGATGATAAAACTCAAAACACGATTAAAATAGAACCAGCGGAAGAAGTGAAACAGGAATATTTTTGTGACGCTGCAGAACAATTGAATTCAAATCTTGATTGTAAGCTAAATGACGATATGGATATAGTTTTCGAATGTGAAGATGTCAAGCCTAATATGGATTATCcagtaattaaacaaattggCAATGGTTATAAAAACCaaaacgaaattaaaatagaGACCTCGGGAAAAGTGAAACATGAGTTTGTTGGTTACCCTGTAGAAGATTCGAATTTGAATATGGATTGTGAAATTGcccaagaaaataaaaaaagaagaatcacaaaaaagtttaacaacGCACAAACGTCTCTCGCATGtgaaatatgcggaaagaaatattcaaataagGCTAATGTGAATTTGCACATTAAATCATCCCATCGAGGTATTATTCACCCGTGTGATCTATGTGGTAAGACGTATTCGCGAAAAGGTaatctcaaatctcacattagCGCCGTACACAATGGTACCAAGCacacatgtgatatttgcggcaacacattttcacaaaaatgtagtctcaaaacccacatcgataGAATACGTAATTGCACCAAACATACATGTGATGTATGCGGAAAGTCGTTTaaacagaagaaaaatcttgaaattcaCGTCGATTCATTGCATACTGGTATCACATATGCATGTACTATTTGTGGAAGGAAACACTCAAGGAAGAGTATGTGTAAAATCGCTTACACATGCGATACATGCGGTAAATCatttactcaaaaaaatagtctcaaaacccacatcgtTGGAATACATAATTGTACCAAACATACATGTGATGtatgcggaaagtcatttaaaaataagagaaGTCTTAAAATTCAcgtcgattcggtgcatattGGTGTCACATATGGATGTGCTATTTGTGGAAGACACTTTTCAAGTAAGCATTATCTCGCAGCTCACATCCGTACGGTGCACAATGGCATCAAATacacatgtgatatttgtggcaAGACACTTTCACAAAAATCCAATCTCAAAGCCCACATTGATTCTGTGCACAGTGGCACCAAACATGCATGTGTTATTTGTGGGAGACAATTTTCAAGAAAGCATTATCTTGAATCTCATATCGGTACAGTGCACAATGGTAATAAACacacatgtgatatttgtggtAAGACATTTTCATGCAAAAGTACTCTTAAAGTCCACATTgatgcagtacataatggtaccagacatacatgtgatatttgtggaagACACTTTTCAACTAAGCATTATCTCAAAACTCATATCGGTACGGTGCACAATGGCACCATGCATGCATGTGACAtatgcggcaagacattttcaatGAAAGGTAACCTTAAAGTCCACATTGATGCAGTGCATAATGATACCAAACacacatgtgatatttgtggtAAGACATTTTCATGCAAAAGTACTCTTAAAGTCCACATTgatgcagtacataatggtacCAGACATACATGTGTTATTTGTGGAAGACAATTTTCAAGTAAGCAGTATCTCGAATGTCACATCGATACGGTGCACAATGGTAACAAACATACATGTGATGTATGCGGAAAGACATATTCACTGAAAGGTAATCTTAACAAACACGTCAAATCAGTGCACAATTAA
Protein Sequence: MACSGSFNSDVRVKEEPGEELLRGNNYEIIDETYDLENLKDLPLLPENSTLVLRKCDANHENEFEDKVEVVAEYEEFKPNIKSLTVNKIDDDSLNHLRNVKDSNDDKTQNTIKIEPAEEVKQEYFCDAAEQLNSNLDCKLNDDMDIVFECEDVKPNMDYPVIKQIGNGYKNQNEIKIETSGKVKHEFVGYPVEDSNLNMDCEIAQENKKRRITKKFNNAQTSLACEICGKKYSNKANVNLHIKSSHRGIIHPCDLCGKTYSRKGNLKSHISAVHNGTKHTCDICGNTFSQKCSLKTHIDRIRNCTKHTCDVCGKSFKQKKNLEIHVDSLHTGITYACTICGRKHSRKSMCKIAYTCDTCGKSFTQKNSLKTHIVGIHNCTKHTCDVCGKSFKNKRSLKIHVDSVHIGVTYGCAICGRHFSSKHYLAAHIRTVHNGIKYTCDICGKTLSQKSNLKAHIDSVHSGTKHACVICGRQFSRKHYLESHIGTVHNGNKHTCDICGKTFSCKSTLKVHIDAVHNGTRHTCDICGRHFSTKHYLKTHIGTVHNGTMHACDICGKTFSMKGNLKVHIDAVHNDTKHTCDICGKTFSCKSTLKVHIDAVHNGTRHTCVICGRQFSSKQYLECHIDTVHNGNKHTCDVCGKTYSLKGNLNKHVKSVHN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01485087;
90% Identity: iTF_01485087;
80% Identity: iTF_01485087;