Basic Information

Insect: Trichogramma pretiosum
Gene Symbol: -
Assembly: GCA_000599845.3
Location: NW:657761-660159[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 1.7 1.3e+02 2.2 0.5 23 43 141 170 124 171 0.69

2 15 0.16 12 5.5 0.1 19 44 200 222 197 222 0.87

3 15 0.45 34 4.1 0.7 18 43 227 249 223 250 0.84

4 15 0.0013 0.098 12.2 2.1 14 44 250 277 241 277 0.85

5 15 0.1 7.4 6.2 0.2 19 43 283 304 279 305 0.90

6 15 0.0087 0.65 9.6 0.2 18 44 310 333 305 333 0.91

7 15 0.088 6.5 6.3 3.0 18 43 338 360 334 361 0.91

8 15 0.068 5.1 6.7 2.6 19 44 367 389 364 389 0.94

9 15 0.016 1.2 8.7 0.9 18 43 394 416 391 417 0.91

10 15 0.33 24 4.5 0.8 18 43 422 444 418 445 0.87

11 15 7.9e-05 0.0058 16.1 0.1 18 44 450 473 446 473 0.95

12 15 3e-05 0.0022 17.4 0.7 18 44 478 501 476 501 0.95

13 15 2 1.5e+02 2.0 1.7 18 43 506 528 504 533 0.81

14 15 0.43 32 4.1 0.8 18 43 562 584 557 585 0.81

15 15 0.76 57 3.3 0.5 19 29 591 601 588 616 0.77

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	1.7	1.3e+02	2.2	0.5	23	43	141	170	124	171	0.69
2	15	0.16	12	5.5	0.1	19	44	200	222	197	222	0.87
3	15	0.45	34	4.1	0.7	18	43	227	249	223	250	0.84
4	15	0.0013	0.098	12.2	2.1	14	44	250	277	241	277	0.85
5	15	0.1	7.4	6.2	0.2	19	43	283	304	279	305	0.90
6	15	0.0087	0.65	9.6	0.2	18	44	310	333	305	333	0.91
7	15	0.088	6.5	6.3	3.0	18	43	338	360	334	361	0.91
8	15	0.068	5.1	6.7	2.6	19	44	367	389	364	389	0.94
9	15	0.016	1.2	8.7	0.9	18	43	394	416	391	417	0.91
10	15	0.33	24	4.5	0.8	18	43	422	444	418	445	0.87
11	15	7.9e-05	0.0058	16.1	0.1	18	44	450	473	446	473	0.95
12	15	3e-05	0.0022	17.4	0.7	18	44	478	501	476	501	0.95
13	15	2	1.5e+02	2.0	1.7	18	43	506	528	504	533	0.81
14	15	0.43	32	4.1	0.8	18	43	562	584	557	585	0.81
15	15	0.76	57	3.3	0.5	19	29	591	601	588	616	0.77

Sequence Information

Coding Sequence: ATGGAATCCAATCATATGTTTAACTCTGGCatcagAGTTAAAGAGGAACCAAATGATGGGTCGTTTACTGGAAATAATTGGGAAATGACTGACGAAAAACCAGATCTTAAAAACGTTCAACTCTTATCATTTTCGCGAGAGAGTTCGacCTATACCCCTAAAAAGTGTGAAGAAAATCACGAAAGTGAACTCGACGACGAAGTGGAAATAGTTGTTGAATGTGAAGACGTCAAGCCACACATTAATTCAttaacagtaaaaaaaattgattgttccCAAAATCTCTGGCGGAACATGAAAGGCAGAGGTGGTCATAAGACTGAAAACATAATTAAAGTAGAATCCGCAGGAGAAGTGAAACAGGAAATTTTTAGTGACATTTCAGAAGAATCGAATTTCAATTTGGATTGTGAACTTGTTGAGCGAAACACAAGAAGAAAAGTagcaaaaaagtataacaacaaacataacctcaaaacacacaTCGATACAGATAATGTTACATCTCACCCATGTAAAATATGGGAAAAGACTCATAATCGAAAGAGTCATCTAAATAAGCATATTCAATCAGCCCATCAAGGTATCACCTTCTCATGCGATATATGCAGCAAGAAATTTTCTCAAGCAGGTACTTTTAAAGTGCACATCAAATCggtgcataaaaaaatctctcatatatgcgatatatgcggaaaATCATTcactaaaaaaagtattctcaAAATTCATATCGATGCGATGCACAATGAAGATATTTCATGTGGTATTTgtgggaaaaaatatttaaataaaggtaatctcaaaaaacacattgatTCAGTACATAAGCGTATCCgtcatgcatgtgatatttgcggaaacaAATACACAACTAAGAGTgacctcaataaacacatcgattcggtgcacgATAAGATTGAATATAAATGCGATGtatgcggaaagtcattttcacgaaaaattaatctcgAAAGGCACATTGACACGGGGCATAATGGTGCAGTCCATACATGCAAAACATGTGGAAAGACGTTTAAACACAAGTTTACTCTGAATAGACACGTTAAATCAAGGCATGATGGTGTTACACATGCATGCAATACGTGCGGAAAGTCATTCACTCAAAAAAGttatctcaaaactcacatcaatacagtacataatggtgtcaaATGTGCATGTGAcatatgcggaaaaaaatttacaagtaaGGCTAATCTCAgaatccacatcgattcggtgcactTAGGTACCACTCATGCATGTGATttgtgcgaaaagaaattcacaaAGAAGAGTATTCTTAAAGCCCACATCGATATAATGCACAATGATGTCGCACCTACTTGTGATATATGCaggaagaaattttcaacgaaaagcAATCTCAAACAAcatatcgattcggtgcacaacGGTGTCACttatgaatgtgatatttgtggaaagaaattctcaaccAAGAATAATCTCATTAAACACATCGATTCAAAGCACAATAACATCGAATATAAATGCGATATATGCGAAAATTCATTTACTCAAAAATGTAgtctcaaagttcacattgAGTCGGTGCACAACGGTATCACTCATGCATATGATATTTGCTGTAAGAcattcaaacgaaaaaatattatcaaaacccacatcgattcggtgcacaatggtgtcaaacgtgtatgcgataagtgcggaaaaaagttcactaaaaatattaatctcCAAATTCACATAGACACGGTGCACAACGGTGTCACTcgtgcatgtgatatttgtagCAAGACATTCAAACGAAAAGattatcttaaaaaacacaaacATAAAGTGCACAATGATTTCACCCACTGA
Protein Sequence: MESNHMFNSGIRVKEEPNDGSFTGNNWEMTDEKPDLKNVQLLSFSRESSTYTPKKCEENHESELDDEVEIVVECEDVKPHINSLTVKKIDCSQNLWRNMKGRGGHKTENIIKVESAGEVKQEIFSDISEESNFNLDCELVERNTRRKVAKKYNNKHNLKTHIDTDNVTSHPCKIWEKTHNRKSHLNKHIQSAHQGITFSCDICSKKFSQAGTFKVHIKSVHKKISHICDICGKSFTKKSILKIHIDAMHNEDISCGICGKKYLNKGNLKKHIDSVHKRIRHACDICGNKYTTKSDLNKHIDSVHDKIEYKCDVCGKSFSRKINLERHIDTGHNGAVHTCKTCGKTFKHKFTLNRHVKSRHDGVTHACNTCGKSFTQKSYLKTHINTVHNGVKCACDICGKKFTSKANLRIHIDSVHLGTTHACDLCEKKFTKKSILKAHIDIMHNDVAPTCDICRKKFSTKSNLKQHIDSVHNGVTYECDICGKKFSTKNNLIKHIDSKHNNIEYKCDICENSFTQKCSLKVHIESVHNGITHAYDICCKTFKRKNIIKTHIDSVHNGVKRVCDKCGKKFTKNINLQIHIDTVHNGVTRACDICSKTFKRKDYLKKHKHKVHNDFTH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01485094;
90% Identity: iTF_01485094;
80% Identity: iTF_01485094;