Tpre003765.1
Basic Information
- Insect
- Trichogramma pretiosum
- Gene Symbol
- -
- Assembly
- GCA_000599845.3
- Location
- NW:1772545-1775140[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.69 51 3.5 0.3 19 43 180 201 170 202 0.90 2 13 0.049 3.7 7.2 4.9 19 44 208 230 205 230 0.94 3 13 0.22 17 5.0 0.1 19 39 236 253 233 258 0.74 4 13 0.26 19 4.8 1.0 5 37 251 279 248 286 0.70 5 13 0.11 8.3 6.0 3.6 15 43 288 313 276 315 0.80 6 13 0.4 30 4.3 2.4 18 43 319 341 305 342 0.78 7 13 0.0011 0.084 12.4 0.8 16 44 345 370 340 370 0.89 8 13 0.00027 0.02 14.4 2.3 18 44 375 398 373 398 0.92 9 13 0.077 5.7 6.5 0.6 19 43 404 425 401 426 0.85 10 13 0.12 9.1 5.9 5.0 19 44 432 454 429 454 0.91 11 13 0.88 66 3.1 8.2 5 43 447 481 443 482 0.85 12 13 0.0037 0.28 10.7 1.6 18 44 487 510 483 510 0.92 13 13 0.058 4.3 6.9 0.5 14 43 511 537 510 538 0.79
Sequence Information
- Coding Sequence
- ATGAGAAGCATGGATTCCCGTAGTATTTTCAATAGTGCCTTGAgaataaaaaaggaaCCCATCGACGAGTGGCTTCccgaaaataattatgatataaTTGACAAGAAACCCAATGTCAACGGTGGTCAGCACGTCGGATTTCCGTTAAATGATTCGgaGTTTCGAAAATATGacgataacaataaaattaagcaTGACGAAGTGCATATCGAGTTTGAGTGTAAAGTCGAGAAGCTCGACACGGATTCATTAGCattgaagaaaattgaagattattctccaaataatttgcaagatgtaaaatatgattttgaaCCCcagaaagtaataaaaatagaaaatgtgtCAAGAGTGAAGGaagaaatgaatttgaatttcgatcGTGAATTCGGCGAgccaaatgaaaaagaaagcgaTAGAAAAGATTCTAACTACAAACACGGGACCCATTCATGTAACACACGTGGCCAAACATTTTCACGCCGAAATAGCCTCAAAATCCACACCGATTCTGTGCACAAAGGTATCACGTATGCATGTGACATGTGTGAATCGAAATTCACGGCTAAGCATAATCTCCAAGCTCACATCGATGCGGTTCATAATGGTATCAGTCATGCGTGTTATGTGTGCAAAAAGACGTTTAAACATAAGAATAATCTGACTAGGCACGTTCAATCAGAGCATAATCGTGTCAGACATTCATGTGACAtatgcggcaagacatttgCACAAACGGGTAGTCTCAAAACCCATTTCGATGCAGTGCACAACGGTGTCACTCAtgaatgtgatatatgcggaaaatCGTTTGCCCAGAAAGGTCGTCTCAAAATCCATATCACTGCTATCCATAATGGTATGATGAATTCGtgcgatatatgcggaaaTAAGTACTCAGAAAAGGGCCATCTCAAGAGACACATCGATTTTGCGCATCATAAAATCTTACATGAATGTGATCgttgtggaaagaaattttcagcCAAGAATAGTCTAAAAATACACGTCGATACCGCGCACAATGGTCTTAAATATGAATGcgatatttgcagaaaaaagtaCTCAGGTAAGAGTgatctcaagaaacacatcgatgtggcgcacaatggtgtcacacATACTTGTGatatatgtaaaaagaaattctccACCACCAGTAatctaaaaaaacacatcgatgcgGTGCACAACGGTGTCagacatgcatgcgatatatgtggtaagacattttcacaaaaacaaCGTCTCcaaatccacatcgattcggtgcacaacGGCGTCACCTACTCATGTGGTAtttgcgggaagaaattctCAAAGAAAAGTAACCTCTGCTGCCACGTCAATGCGTTTCATAAAGGTACTAGATATACATGTGATACAtgtgaattaaaatttacaagcAAGAGTAATCTAAGAGTCCACATCAGGGCAAAGCATATTGGTTCCAACTATGCATGTCAATTCtgtgaaagaaaatataaatatcgatCTACTCTAAATAAACACGTCAAATCGGCGCACAATCATAATACCTTTGAATGCGAGAAATGTGGGAAGACATTCGGACGAAAAGGAAATCTCGAAGCTCACATCGGCATGGCGCACCGCTCAAGCTTCATGAccaaataa
- Protein Sequence
- MRSMDSRSIFNSALRIKKEPIDEWLPENNYDIIDKKPNVNGGQHVGFPLNDSEFRKYDDNNKIKHDEVHIEFECKVEKLDTDSLALKKIEDYSPNNLQDVKYDFEPQKVIKIENVSRVKEEMNLNFDREFGEPNEKESDRKDSNYKHGTHSCNTRGQTFSRRNSLKIHTDSVHKGITYACDMCESKFTAKHNLQAHIDAVHNGISHACYVCKKTFKHKNNLTRHVQSEHNRVRHSCDICGKTFAQTGSLKTHFDAVHNGVTHECDICGKSFAQKGRLKIHITAIHNGMMNSCDICGNKYSEKGHLKRHIDFAHHKILHECDRCGKKFSAKNSLKIHVDTAHNGLKYECDICRKKYSGKSDLKKHIDVAHNGVTHTCDICKKKFSTTSNLKKHIDAVHNGVRHACDICGKTFSQKQRLQIHIDSVHNGVTYSCGICGKKFSKKSNLCCHVNAFHKGTRYTCDTCELKFTSKSNLRVHIRAKHIGSNYACQFCERKYKYRSTLNKHVKSAHNHNTFECEKCGKTFGRKGNLEAHIGMAHRSSFMTK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01485183;
- 90% Identity
- iTF_01485183;
- 80% Identity
- iTF_01485183;