Basic Information

Insect: Trichogramma pretiosum
Gene Symbol: -
Assembly: GCA_000599845.3
Location: NW:1799487-1801688[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 4.1 3e+02 1.0 0.4 29 44 154 170 148 170 0.74

2 17 0.12 9.2 5.9 0.4 30 44 184 198 177 198 0.77

3 17 0.015 1.1 8.8 0.3 18 44 203 226 200 226 0.90

4 17 0.074 5.5 6.6 0.4 19 43 232 253 228 254 0.78

5 17 0.016 1.2 8.7 0.8 14 39 255 277 244 282 0.73

6 17 0.048 3.6 7.2 0.3 18 43 287 309 284 310 0.90

7 17 0.87 65 3.2 2.0 17 30 314 334 309 343 0.68

8 17 0.27 20 4.8 2.0 13 29 338 354 326 369 0.74

9 17 0.96 72 3.0 0.2 19 44 372 394 360 394 0.90

10 17 0.061 4.5 6.9 4.9 19 44 400 422 397 422 0.94

11 17 0.25 18 4.9 0.0 19 43 428 449 425 450 0.83

12 17 5e-05 0.0037 16.7 0.6 3 44 441 478 439 478 0.85

13 17 3.5 2.6e+02 1.2 0.6 19 36 484 498 482 506 0.72

14 17 0.035 2.6 7.6 5.3 19 44 540 562 528 562 0.93

15 17 0.052 3.9 7.1 0.1 19 43 568 589 565 590 0.88

16 17 0.062 4.6 6.8 0.8 3 29 581 606 580 618 0.77

17 17 0.031 2.3 7.8 1.2 15 43 620 645 611 646 0.82

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	4.1	3e+02	1.0	0.4	29	44	154	170	148	170	0.74
2	17	0.12	9.2	5.9	0.4	30	44	184	198	177	198	0.77
3	17	0.015	1.1	8.8	0.3	18	44	203	226	200	226	0.90
4	17	0.074	5.5	6.6	0.4	19	43	232	253	228	254	0.78
5	17	0.016	1.2	8.7	0.8	14	39	255	277	244	282	0.73
6	17	0.048	3.6	7.2	0.3	18	43	287	309	284	310	0.90
7	17	0.87	65	3.2	2.0	17	30	314	334	309	343	0.68
8	17	0.27	20	4.8	2.0	13	29	338	354	326	369	0.74
9	17	0.96	72	3.0	0.2	19	44	372	394	360	394	0.90
10	17	0.061	4.5	6.9	4.9	19	44	400	422	397	422	0.94
11	17	0.25	18	4.9	0.0	19	43	428	449	425	450	0.83
12	17	5e-05	0.0037	16.7	0.6	3	44	441	478	439	478	0.85
13	17	3.5	2.6e+02	1.2	0.6	19	36	484	498	482	506	0.72
14	17	0.035	2.6	7.6	5.3	19	44	540	562	528	562	0.93
15	17	0.052	3.9	7.1	0.1	19	43	568	589	565	590	0.88
16	17	0.062	4.6	6.8	0.8	3	29	581	606	580	618	0.77
17	17	0.031	2.3	7.8	1.2	15	43	620	645	611	646	0.82

Sequence Information

Coding Sequence: ATGAAACAAATATGGAATCCAGTGATACACTTGATCGtgatagtgaaagatGAACCTACTGATATGTCGCTTATCGAGAATGATTGGGACGTAACTGATGAGAAACCAGATCTCAAAAATTTCCAACTCTTGCCATTACTTGAACAAAATTCAACCCACACCTTTCGAAAATGtgacaaaaattatgaaagcGATCTTGatgacaaaatgaaaatagtttttgaatgtCAAGATGTGAAGCccaatattaatttattaaaagttaaaaaatctgagaatgattttcaaaatcacttGCGGAATGTCAAAGATATCGATGGTAATACAACTCAAGacaacattaaaataaaacccGAGGGTGAAGTTAAACAAGAATTTGTTGATAATGTAGTAGGAGAATCGAATTTGAAGTTCGACCGTAAATCTGTTGAACAgaataaaaagagaagaattacaaaaaaactcaacgaagatcataacctcaaaaaacacatcgatccGGCTCATCGTGATACCTCGCCCACTTTTGGTGTATGCGAAAACAAGAGCTCAACAAAtagtaatctcaaaaaacatatcgACTCGATGCACAGTGGTATCAAACATGAGTGTGATGTATGcggcaagaaattttcattcaaaagtaATCTTAAAGTCCACATTGATGCcgtgcataatggtatcaagtatccatgtgatatttgcgaaaagaaGTACTCACAGAAGGGTgatctcaagaaacacatcgaTATCGCGCACAATGGTCTAAGATATTCatgcgatatttgcggaaaaaagTACGCAGGTAAGAGTGATCTCAAGAGACACACCGATGTggcgcacaatggtgtcacacATACTTGTGatgtatgtaaaaagaaattctccACCAGCGGTAATctaaaaattcacatcgatacGGTGCATGATAAAATCGTacatgaatgtgatatttgcagcaagacattttcacaaaaacgTTATCTCCAAATCCACATAGATTCGATGCACAATGGTACACGACAcgtatgtgatatttgtggaaaagATTACAACAGCAGGGGTTATcttaaaatccacatcgatgcaATGCACAAGGgtgtcacacatgcatgcgaAGTATGTGAATCGAAATTCACCGTTAAGAGTAATCTCCAAGCTCACATCGATGCGGTTCATAATGGTATCAGTCATGCGTGTTATGTGTGCAAAAAGACGTTTAAACATAAGAATAATCTGACTAGGCACGTTCAATCAGAGCATAATCGTATCAGACATGGatgtgatatatgcggcaagacatttgCACAAACGGATAGTCTCAAAACCCATTTCGATGCAGTGCACAACGGTGTCACTCATGAATGTGATGTATGCGGAAAGAAGTTCTCAGATAAAAGTAATGCCAAAAGGCACATTGATACGATGCACAATGGGgccacacatgcatgtgatacgTGCGGAAAGACGTTCAAACAAAAGtttaatctcaaaatccacaccGATTCGGTACACAAAGGTATCACGTATGCATGTGACACGTGTGAATCGAAATTCACGACTAAGTATAGTCTCCAAGTTCACATCGATGCGGTTCATAATGGTATCAGTCATGCGTGTTATGTGTGCAAAAAGACGTTTAAACATAAGAGGAATCTTACTAGGCACATTCAATCAGCGCATAATTGTGCCAGACATTCATGTGATAcatgcggcaagacatttgCATACACAGGTAATCTGAAAACCCATTTCGATGCAGTGCACAACGGTGTCACTCATGAATGTGATTTATGTGGAAagatattttcacaaaaaggtTACCTCAAAATCCATATCACTGCTATCCATAATGGTATGATGAATTCGtgcgatatatgcggaaagaaatatGTACAGAAGGGTAAACTTAAAGCCCACGTTGATTCGATGCATCACTCACTCATTTCAACTCGATAA
Protein Sequence: MKQIWNPVIHLIVIVKDEPTDMSLIENDWDVTDEKPDLKNFQLLPLLEQNSTHTFRKCDKNYESDLDDKMKIVFECQDVKPNINLLKVKKSENDFQNHLRNVKDIDGNTTQDNIKIKPEGEVKQEFVDNVVGESNLKFDRKSVEQNKKRRITKKLNEDHNLKKHIDPAHRDTSPTFGVCENKSSTNSNLKKHIDSMHSGIKHECDVCGKKFSFKSNLKVHIDAVHNGIKYPCDICEKKYSQKGDLKKHIDIAHNGLRYSCDICGKKYAGKSDLKRHTDVAHNGVTHTCDVCKKKFSTSGNLKIHIDTVHDKIVHECDICSKTFSQKRYLQIHIDSMHNGTRHVCDICGKDYNSRGYLKIHIDAMHKGVTHACEVCESKFTVKSNLQAHIDAVHNGISHACYVCKKTFKHKNNLTRHVQSEHNRIRHGCDICGKTFAQTDSLKTHFDAVHNGVTHECDVCGKKFSDKSNAKRHIDTMHNGATHACDTCGKTFKQKFNLKIHTDSVHKGITYACDTCESKFTTKYSLQVHIDAVHNGISHACYVCKKTFKHKRNLTRHIQSAHNCARHSCDTCGKTFAYTGNLKTHFDAVHNGVTHECDLCGKIFSQKGYLKIHITAIHNGMMNSCDICGKKYVQKGKLKAHVDSMHHSLISTR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01485072;
90% Identity: iTF_01485072;
80% Identity: iTF_01485072;