Basic Information

Insect: Trichogramma pretiosum
Gene Symbol: -
Assembly: GCA_000599845.3
Location: NW:38575-40960[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.021 1.6 8.3 0.4 14 43 180 206 174 207 0.83

2 13 1.8 1.3e+02 2.2 0.1 19 29 213 223 210 228 0.87

3 13 0.011 0.84 9.2 0.5 7 44 230 264 225 264 0.84

4 13 0.01 0.78 9.3 0.2 19 44 270 292 267 292 0.93

5 13 0.4 30 4.2 0.7 18 44 298 321 293 321 0.89

6 13 0.11 8.4 6.0 0.3 19 35 327 340 324 349 0.77

7 13 0.024 1.8 8.1 0.7 18 43 355 377 343 379 0.85

8 13 0.001 0.074 12.6 0.3 19 44 384 406 381 406 0.95

9 13 0.05 3.8 7.1 0.2 18 31 411 424 408 434 0.79

10 13 0.0016 0.12 11.9 1.1 19 44 469 491 454 491 0.84

11 13 0.0076 0.57 9.7 1.2 5 44 484 519 480 519 0.82

12 13 0.25 19 4.9 1.8 18 43 524 546 522 547 0.75

13 13 0.14 10 5.7 3.0 19 44 581 603 568 603 0.86

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.021	1.6	8.3	0.4	14	43	180	206	174	207	0.83
2	13	1.8	1.3e+02	2.2	0.1	19	29	213	223	210	228	0.87
3	13	0.011	0.84	9.2	0.5	7	44	230	264	225	264	0.84
4	13	0.01	0.78	9.3	0.2	19	44	270	292	267	292	0.93
5	13	0.4	30	4.2	0.7	18	44	298	321	293	321	0.89
6	13	0.11	8.4	6.0	0.3	19	35	327	340	324	349	0.77
7	13	0.024	1.8	8.1	0.7	18	43	355	377	343	379	0.85
8	13	0.001	0.074	12.6	0.3	19	44	384	406	381	406	0.95
9	13	0.05	3.8	7.1	0.2	18	31	411	424	408	434	0.79
10	13	0.0016	0.12	11.9	1.1	19	44	469	491	454	491	0.84
11	13	0.0076	0.57	9.7	1.2	5	44	484	519	480	519	0.82
12	13	0.25	19	4.9	1.8	18	43	524	546	522	547	0.75
13	13	0.14	10	5.7	3.0	19	44	581	603	568	603	0.86

Sequence Information

Coding Sequence: atggaGTCTAGTGGTCCAGTCAACTATTCCGACAAaataaaaGAAGAACCTAATGATATGGGTTATGTCACAAATGATAAGGAGCAAACAATAAACCAAGAATCTGATTCTTCAAATATGCAATATCACAGATGTCTGCAAGAGAATATCATTCATACGCTCGAAGAACGCAGAGAAATGAATGATTTTCAATCTAACCAAGAAACTAAAATAGagtttgagtgcaaagatgaaAAATCCGATGTAAATTTATTAGTATCCGCTGAAGCGAGCGAAGgaattcatgaatttcaacctaaccaagaaattaaaatagagtttgagtgcaaagatgtgaAACCAGCTGTGAATTTATTAGTACCCAATAAAGTGAACGATTGGTCGAACGATTTTGCTACTCATTCctcaattaaaatagaaactgAAGGCACAGTCAAGAAAGAGTTTCTCAgcgatattataaaaagtatagatTTCAATACTGGAAGCGAACTCCATGGAAAGGATACCAAAATTAGTCCTCAAATAGAGAAACCCCAAAAATCTAATCAATGTgagaaatgtttaaaaaatttttctgcaaaaaacAGTTTGAAAACCCACATTGATATGGTGCATAAACGTATCACTTATCCGTGTGACatttgtgaaaagacatttaaAAGTCAACTCTATATCAAGTTGCATATTGATTTAGTGCATAAAGGTCGAAAATCTTACAGCTGCGATGTATGCGAAAAGTCATTTGTACAAAAGAGTAATTTGAAAGCCCACATTGATATGGTGCATAAACGTATCACTTACCCGTGTGGCATTtgtgaaaaaacatttaaaatcaaaaattatctGAAGTCACAtattgattcagtgcataatggtcGAAAATCTCACAGCTGCGATAcatgcggaaagtcatttgcacaaaaaagtGCTTTTAAATTACACATTGATTCTAAGCATAATCGTATCAATTACCCATGTGGCATTTGTGGAAAaacatttgtaaataaagGTAATCTCAAAGTGCATACGGATTCAGTGCATGATAATCGAAAACCTCACAGCTGCGATGtatgcggaaagtcatttgcacaaaaaagtaatctgaAAAATCACATTGATGTGGTGCATAATTGTATTGCTTACCCGTGTGACATTTGCGGGAAGTCATTTACACTAAAGAGTAATCTGAAAACACATATTAATTCGGTACATAAACGTATCTCTTACTCGTGTGACatttgtgaaaagacattttcCTATAAGGGTAGTCTCAAATTTCATATTGATGCAGTGCATAATGGTCGAAAATCTCACAACTACGATTTATGCGggaaatcatttttacaaaaggGTGCTCTGAAAGCTCACATCGATGTGGTGCATAAAAATATCACTTACCCGTGTAACatttgtgaaaagacattttcaaGCAAGAGTTCTATCAAGTCAcatatcgattcggtgcataatgggcGAAAATATcaatgtgatatatgcggaaagtTAATTGCATATAAGAGGGCTTTAAAATCACACATTGATACAGTGCACAATCCGATTTCTTATTCGTGtaaaatttgcgaaaaaatatttaaaaaaaaacgttatctCAAGTCGCACGTTGATTCATTGCATAATGAGCGAAAATATCACTGTGAATTATGCGGaatgtcatttttatacaAGGGTGCTCTGAAAACTCATATTGATTGGATACATAATCATATTTCCTACCCGTGTGACATTTgcggaaaatcattttcaagaaaaatacatttaaaaaaacacatcgattcaactcacaaataa
Protein Sequence: MESSGPVNYSDKIKEEPNDMGYVTNDKEQTINQESDSSNMQYHRCLQENIIHTLEERREMNDFQSNQETKIEFECKDEKSDVNLLVSAEASEGIHEFQPNQEIKIEFECKDVKPAVNLLVPNKVNDWSNDFATHSSIKIETEGTVKKEFLSDIIKSIDFNTGSELHGKDTKISPQIEKPQKSNQCEKCLKNFSAKNSLKTHIDMVHKRITYPCDICEKTFKSQLYIKLHIDLVHKGRKSYSCDVCEKSFVQKSNLKAHIDMVHKRITYPCGICEKTFKIKNYLKSHIDSVHNGRKSHSCDTCGKSFAQKSAFKLHIDSKHNRINYPCGICGKTFVNKGNLKVHTDSVHDNRKPHSCDVCGKSFAQKSNLKNHIDVVHNCIAYPCDICGKSFTLKSNLKTHINSVHKRISYSCDICEKTFSYKGSLKFHIDAVHNGRKSHNYDLCGKSFLQKGALKAHIDVVHKNITYPCNICEKTFSSKSSIKSHIDSVHNGRKYQCDICGKLIAYKRALKSHIDTVHNPISYSCKICEKIFKKKRYLKSHVDSLHNERKYHCELCGMSFLYKGALKTHIDWIHNHISYPCDICGKSFSRKIHLKKHIDSTHK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01485083;
90% Identity: iTF_01485083;
80% Identity: iTF_01485083;