Basic Information

Insect: Trichogramma pretiosum
Gene Symbol: -
Assembly: GCA_000599845.3
Location: NW:242287-244997[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 3.9 2.9e+02 1.1 0.3 5 43 159 194 155 195 0.68

2 17 0.42 31 4.2 0.2 19 43 201 222 198 223 0.80

3 17 0.00029 0.022 14.3 2.3 18 44 228 251 217 251 0.89

4 17 0.019 1.4 8.5 1.8 19 43 258 279 256 280 0.95

5 17 0.55 41 3.8 0.1 19 43 286 307 284 308 0.81

6 17 0.021 1.5 8.4 1.1 18 43 313 335 306 338 0.81

7 17 0.009 0.67 9.5 1.0 19 43 343 364 337 365 0.94

8 17 0.058 4.3 6.9 2.8 14 43 394 420 370 421 0.78

9 17 0.033 2.4 7.7 2.9 12 43 421 449 414 453 0.72

10 17 0.0019 0.14 11.7 0.2 18 44 455 478 447 478 0.89

11 17 1.8 1.3e+02 2.2 0.3 18 40 483 502 481 506 0.76

12 17 0.009 0.67 9.5 0.7 18 43 511 533 503 534 0.84

13 17 0.048 3.6 7.2 3.4 19 43 541 562 535 563 0.94

14 17 7.5 5.6e+02 0.2 0.2 19 39 569 586 568 591 0.70

15 17 0.043 3.2 7.4 1.4 14 35 592 610 581 619 0.68

16 17 1.4 1e+02 2.5 2.7 13 38 620 642 612 648 0.77

17 17 0.062 4.6 6.8 0.4 19 43 654 675 650 676 0.86

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	3.9	2.9e+02	1.1	0.3	5	43	159	194	155	195	0.68
2	17	0.42	31	4.2	0.2	19	43	201	222	198	223	0.80
3	17	0.00029	0.022	14.3	2.3	18	44	228	251	217	251	0.89
4	17	0.019	1.4	8.5	1.8	19	43	258	279	256	280	0.95
5	17	0.55	41	3.8	0.1	19	43	286	307	284	308	0.81
6	17	0.021	1.5	8.4	1.1	18	43	313	335	306	338	0.81
7	17	0.009	0.67	9.5	1.0	19	43	343	364	337	365	0.94
8	17	0.058	4.3	6.9	2.8	14	43	394	420	370	421	0.78
9	17	0.033	2.4	7.7	2.9	12	43	421	449	414	453	0.72
10	17	0.0019	0.14	11.7	0.2	18	44	455	478	447	478	0.89
11	17	1.8	1.3e+02	2.2	0.3	18	40	483	502	481	506	0.76
12	17	0.009	0.67	9.5	0.7	18	43	511	533	503	534	0.84
13	17	0.048	3.6	7.2	3.4	19	43	541	562	535	563	0.94
14	17	7.5	5.6e+02	0.2	0.2	19	39	569	586	568	591	0.70
15	17	0.043	3.2	7.4	1.4	14	35	592	610	581	619	0.68
16	17	1.4	1e+02	2.5	2.7	13	38	620	642	612	648	0.77
17	17	0.062	4.6	6.8	0.4	19	43	654	675	650	676	0.86

Sequence Information

Coding Sequence: ATGGAATCGAGTGGAACGTTGAACTGTGCTGttcgcGTGAAAGAAGAACCAATCGACGTGTTGCTCGGTGAAAATGATTACATTGTAATTGACAAGACAGCCGAtgtcaacaattttcaattcctCAGGCATTCGCATGAAAATCGAatTCATATGCTTCAAAAATCTGACGAAAATCACGAAAGTCAACATGACGACTTGGCGATCGAGTTGGAATGTAAAGACATGAAGCCGAGCTTGGATTTATTAGcagttatgaaaattgaaaattgttctgAAGATCACTTGGCAGCTATTGAAAATGGTAACGAATATCAAACTCAAAACATTAAATTAGAACCTTTGGATGCAGTAAAAAAGGAATCTTTTGTGGACGACGCCAATCAATTTAATATGAACTCAAACTGTGAACTCAGCAAGCCAAAGAATAGAAGAACAGttatgaaaaagttgaattataatcataatatcaaaaaacacATTGTGGACATGCCAAATGGAAAAATCGCTTATCCTTGTGATACATGTGGAAAGGCATTTAGACAACGAAAAAGTCTCAAAGTCCATATCGACTCGGTGCATCTTAAAATCACCCACAGTTGTGACttatgtggaaagacattctcagTTAAAAGTTACCTCAAAATGCATATTGAAGCGATACATAATGGTAAAACTCCCACATGCGATATCTGCCAAAAAACGTTCTCTCAAATGAGTAATCTTCGCAGCCACATCAACTCAGTTCATAATGGTACAATCACCCATTCTTGTGATAcatgtggaaagtcattcGGACGTAAGAGTAATCTTAAAaatcacatcgattcgatgcatCTTAAAATCACTCATGGCTGTGACttatgtggaaagacattctcagTTAAAAGTTACCTCAAAATGCATATTGAAGCGATACATAATGGTAAAACTCCCACATGCGATATCTGCGGAAAGACGTTCTCTCAAAAGGGTAATCTCCAAACCCACATCAACTTAGTGCATGATTGTAAAATCACCCATTCTTGTGATAcatgtggaaagtcattcGGACGTAAGAGTAATCTTAAAaatcacatcgattcgatgcatCTTAAAATCACTCATGGCTGtgacttatgtgaaaagtcaTTCTCACTTAAAGGTTATCTCAAGAAACATATTGAAGCGATACATAATGGTAAAACTCccacatgtgatatttgcggaaagacgtTCTCTCAAAAGGGTAGTCTCCaaacccacatcgattcagtgcataatagAATGAAAAGTTACGAATGTGACGTGTGTGGCAAGAAGTTCTCCCGAAAGGGCACTCTGAAAATTCATACCAATTCCATGCATAAAGGTACCACCTACCCATGCGATttttgcggaaagacattttctcaaaaaagttatttgaaaTATCATATCGATTCGGCACATAACAGTATCAGACAAGAATGTGATAcatgtggaaagtcattcTCAGCTAAAAGTTACCTCAAAATACATATTGAAGCGATACATAATGGTAAAACTCCCACATGCGATATCTGCGGAAAGACGTTCTCTCAAAAGGGTAATCTCCAAACCCACATCAACTTGATGCATGATTGTAAAATCGCCCATTCTTGTGATAcatgtggaaagtcattcGGACGTAAGAGTAATCTTAAAaatcacatcgattcgatgcatCTTAAAATCACTCATGGCTGtgacttatgtgaaaagtcaTTCTCACTTAAAGGTTATCTCAAGAAACATATTGAAGCGATACATAATGGTAAAACTCccacatgtgatatttgcggaaagacgtTCTCTCAAAAGGGTAGTCTCCAAACCCACATCAACTTGGTtcataatagtaaaaaaagttatgaatgtGATGCCTGTGGCAAGAAATTTTTCCGAAAGGATCGTTTGAAACATCATACCGATTTCGCACATAATGGCATCACCTTCCCATGCGAGTTTtgtgaaaaaacattttctcaaaaatggTGTTTGAAAACTCACACCGATtcgtttcataaaaatatcaattaccCATGA
Protein Sequence: MESSGTLNCAVRVKEEPIDVLLGENDYIVIDKTADVNNFQFLRHSHENRIHMLQKSDENHESQHDDLAIELECKDMKPSLDLLAVMKIENCSEDHLAAIENGNEYQTQNIKLEPLDAVKKESFVDDANQFNMNSNCELSKPKNRRTVMKKLNYNHNIKKHIVDMPNGKIAYPCDTCGKAFRQRKSLKVHIDSVHLKITHSCDLCGKTFSVKSYLKMHIEAIHNGKTPTCDICQKTFSQMSNLRSHINSVHNGTITHSCDTCGKSFGRKSNLKNHIDSMHLKITHGCDLCGKTFSVKSYLKMHIEAIHNGKTPTCDICGKTFSQKGNLQTHINLVHDCKITHSCDTCGKSFGRKSNLKNHIDSMHLKITHGCDLCEKSFSLKGYLKKHIEAIHNGKTPTCDICGKTFSQKGSLQTHIDSVHNRMKSYECDVCGKKFSRKGTLKIHTNSMHKGTTYPCDFCGKTFSQKSYLKYHIDSAHNSIRQECDTCGKSFSAKSYLKIHIEAIHNGKTPTCDICGKTFSQKGNLQTHINLMHDCKIAHSCDTCGKSFGRKSNLKNHIDSMHLKITHGCDLCEKSFSLKGYLKKHIEAIHNGKTPTCDICGKTFSQKGSLQTHINLVHNSKKSYECDACGKKFFRKDRLKHHTDFAHNGITFPCEFCEKTFSQKWCLKTHTDSFHKNINYP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01485041;
90% Identity: iTF_01485041;
80% Identity: iTF_01485041;