Tpre012254.1
Basic Information
- Insect
- Trichogramma pretiosum
- Gene Symbol
- -
- Assembly
- GCA_000599845.3
- Location
- NW:1179470-1181896[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.019 1.4 8.5 2.2 15 42 213 237 206 239 0.72 2 15 0.0015 0.11 12.0 1.4 19 44 245 267 242 271 0.90 3 15 0.0027 0.2 11.2 3.8 5 44 260 295 258 295 0.86 4 15 0.023 1.7 8.2 3.4 6 44 289 323 285 323 0.84 5 15 0.00015 0.011 15.2 2.8 14 44 324 351 317 351 0.88 6 15 0.1 7.7 6.1 0.4 17 29 355 367 353 379 0.80 7 15 0.011 0.83 9.2 5.0 11 44 378 408 369 408 0.85 8 15 0.14 10 5.7 2.8 14 43 409 435 405 436 0.88 9 15 0.065 4.8 6.8 0.8 17 38 440 458 436 468 0.70 10 15 1.3 1e+02 2.5 5.0 16 38 467 486 458 496 0.73 11 15 0.0048 0.36 10.4 6.1 13 43 492 519 483 525 0.83 12 15 0.094 7 6.3 2.3 14 43 521 547 517 548 0.87 13 15 0.19 14 5.2 2.4 16 38 551 570 547 580 0.70 14 15 0.0078 0.58 9.7 1.7 17 43 580 603 575 604 0.92 15 15 0.46 34 4.1 1.4 18 43 609 631 605 632 0.90
Sequence Information
- Coding Sequence
- ATGGAATCGAGTGATATAAGTGATTGTGCTCCGAGGGTGAAGGAGGAGCCTCGCGATGAAATGATGGACGAGAAACCCGATTTGAAGAACTTTCCACTTTTACCCTTTCCGCGAGAAAATTCGACTCACAGCTTCCAAAAATGTGACGAAAATCATCAACATAGACTTCTAGACGGAGTGGAAGTAGTTATTGAATGTGAATATGCGAAGCCCAACATTAAATCATTAGCAGTTGACAAAATTGAGGAAGATTCCCTAAATAACTTAAGGAATGCACAAGGTAGCAATgattatcaaaatcaaaacaCAATTAAAATAGAATCAGCGGAAGAAGTGAAACACGAATATATTTGTGATACTAAAGAAcactttaatttaaatcttGACTGTAAGCTAAATTACGATATGGATATAGTTTTTGAATGTGAAGATGTCAAGCCCAATATGGATTATCcagtaattaaacaaattggAGATGGTTATAAAAACCaaaacgaaattaaaataGGGACCTCGGGGAAAGTGAAACATGAATTTGTTGGCGACGCTGCAGAAGATTCGAATTTGAATATCGACTGTGAAATTGcccaagaaaataaaaaaagaagaatcacaaaaaagtttaacaacGCACAAACGTCTCACGCATGcgaaatatgcggaaagaaatattcaaataagGCTAACGTGAATTTGCACATTAAATCATCCCATCGAGGTATTATTCACCCGTGTGATCTATGTGGTAAGACGTATTCGCGAAAAGGTaatctcaaatctcacattagCGCCGTACACAATGGTACCAAGCacaaatgtgatatttgcggcaagacattttcacaaagaTACAATCTCAAAGCCCACATCGATACTATACATAATGGCACCAAACATACATGTGATGtatgcggaaagtcatttaaacagaagaaaaatcttaaaattcacGTCGATACGGTGCACAATGGCACCAAACATATATGTGACAtatgcggcaagacattttcacaaagatccaatctcaaaacccacatcgatagaatacataatggtatcaaacatacatgtgatatttgtggaaaacAATTTACAAGTAAGCAGTATGTTGAAGTTCACATCGATTCTGTGCACAATAATGGCACCAAACACACATGTGCTATTTGtggcaagacattttcacaaagaTGCAATCTCAAAACACACATCGATACAATACATAATGGCACGAAACATACATGTGATGtatgcggaaagtcatttaaacagaagaaaaatcttaaaattcacGTCGATTCATTGCATACTGGTATCAAgcataaatgtgatatttgcggaagaCAATTTTCAAGTAAGAATTATCTTGAAGTTCACATCGATACTGTGCACAATGGTATCAAACATACATGTGCTGTTTGTGGGaaacaattttcaagtaaGAATTATCTCGAATGTCACATCGATACGGTGCATAATGGCACCAAACATACATGTGACAtatgcggcaagacattttcacaaagaTCCAATCTCAAAACACACATCGGTACAATACATATTGGCACCAAACATACATGTGATGtatgcggaaagtcatttaaacagaagaaaaatcttaaaattcacGTCGATTCATTGCATACTGGTATCAAgcataaatgtgatatttgtggaagACAATTTTCAAGTAAGAATTATCTTGAAGTTCACATCGATACTGTGCACAATGGTATCAAACATACATGTGAcgtatgcggaaagaaattctcagGGAAAAGTTATCTCAAAACCCATATCGAGACGGTGCATTGTAAAATCACGCACACATGCGATACATGCGGaagaacattttcaaaaaagtttaatctGAAAGCCCACATCGATAAGATACATAACTCACTCATTAAAACTAAATGA
- Protein Sequence
- MESSDISDCAPRVKEEPRDEMMDEKPDLKNFPLLPFPRENSTHSFQKCDENHQHRLLDGVEVVIECEYAKPNIKSLAVDKIEEDSLNNLRNAQGSNDYQNQNTIKIESAEEVKHEYICDTKEHFNLNLDCKLNYDMDIVFECEDVKPNMDYPVIKQIGDGYKNQNEIKIGTSGKVKHEFVGDAAEDSNLNIDCEIAQENKKRRITKKFNNAQTSHACEICGKKYSNKANVNLHIKSSHRGIIHPCDLCGKTYSRKGNLKSHISAVHNGTKHKCDICGKTFSQRYNLKAHIDTIHNGTKHTCDVCGKSFKQKKNLKIHVDTVHNGTKHICDICGKTFSQRSNLKTHIDRIHNGIKHTCDICGKQFTSKQYVEVHIDSVHNNGTKHTCAICGKTFSQRCNLKTHIDTIHNGTKHTCDVCGKSFKQKKNLKIHVDSLHTGIKHKCDICGRQFSSKNYLEVHIDTVHNGIKHTCAVCGKQFSSKNYLECHIDTVHNGTKHTCDICGKTFSQRSNLKTHIGTIHIGTKHTCDVCGKSFKQKKNLKIHVDSLHTGIKHKCDICGRQFSSKNYLEVHIDTVHNGIKHTCDVCGKKFSGKSYLKTHIETVHCKITHTCDTCGRTFSKKFNLKAHIDKIHNSLIKTK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01485812; iTF_01485056;
- 90% Identity
- iTF_01485812; iTF_01485056;
- 80% Identity
- iTF_01485812; iTF_01485056;