Basic Information

Insect: Trichogramma pretiosum
Gene Symbol: -
Assembly: GCA_000599845.3
Location: NW:694378-697012[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.00071 0.053 13.0 1.3 18 44 207 230 191 230 0.79

2 15 0.0041 0.3 10.6 0.3 19 43 236 257 233 258 0.90

3 15 0.15 11 5.6 1.7 19 40 264 282 261 287 0.77

4 15 0.0026 0.2 11.2 3.4 6 44 280 314 275 314 0.78

5 15 0.00036 0.027 14.0 0.3 19 44 320 342 317 342 0.92

6 15 0.033 2.4 7.7 0.2 18 43 347 369 345 370 0.92

7 15 0.0039 0.29 10.7 1.6 15 44 372 398 362 398 0.78

8 15 1 77 2.9 2.2 18 44 403 426 400 426 0.90

9 15 3.6 2.7e+02 1.2 4.0 18 43 431 453 429 454 0.89

10 15 0.094 7 6.3 0.1 18 44 459 482 456 482 0.89

11 15 0.23 17 5.0 2.3 18 43 487 509 484 510 0.82

12 15 0.012 0.87 9.2 0.7 19 44 516 538 513 538 0.93

13 15 0.071 5.3 6.7 0.2 19 44 544 566 540 566 0.87

14 15 0.0054 0.4 10.2 1.7 14 44 567 594 563 594 0.88

15 15 0.011 0.85 9.2 1.4 19 44 600 622 597 622 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.00071	0.053	13.0	1.3	18	44	207	230	191	230	0.79
2	15	0.0041	0.3	10.6	0.3	19	43	236	257	233	258	0.90
3	15	0.15	11	5.6	1.7	19	40	264	282	261	287	0.77
4	15	0.0026	0.2	11.2	3.4	6	44	280	314	275	314	0.78
5	15	0.00036	0.027	14.0	0.3	19	44	320	342	317	342	0.92
6	15	0.033	2.4	7.7	0.2	18	43	347	369	345	370	0.92
7	15	0.0039	0.29	10.7	1.6	15	44	372	398	362	398	0.78
8	15	1	77	2.9	2.2	18	44	403	426	400	426	0.90
9	15	3.6	2.7e+02	1.2	4.0	18	43	431	453	429	454	0.89
10	15	0.094	7	6.3	0.1	18	44	459	482	456	482	0.89
11	15	0.23	17	5.0	2.3	18	43	487	509	484	510	0.82
12	15	0.012	0.87	9.2	0.7	19	44	516	538	513	538	0.93
13	15	0.071	5.3	6.7	0.2	19	44	544	566	540	566	0.87
14	15	0.0054	0.4	10.2	1.7	14	44	567	594	563	594	0.88
15	15	0.011	0.85	9.2	1.4	19	44	600	622	597	622	0.93

Sequence Information

Coding Sequence: ATGAACTTCCAAACAAATAAGATGGAATCGAGCGGAATGTTTAACTGTGtagtcagagTAAAAAGTGAACCTATTGATGTGTCATATGCTGAGAATGAGTATAATAGTATTGACGAGACCctcgatgataaaaattttgaattttccagATGTCCACAAGAAAACCCAATTCACGTGCTTCGGAAATCTGACGAAAGTCACAAAGGTGAACTTGACGAGTTGGCGATCGAGTTGGAATGTAAAGAACAGAAGCCCAAATTTGATTTACTAGCGGTTACGAAGATTGAAAATTCGTTTCAAAATCACTCGCAGCATATGGAAGATGGAAATGGTCATCGAGTTCGAggtgaaattaaaatagaaaattcgGGAGCTATAAAAAAGGAATCATTCGTGGACGACGCAAGCCAATTGAATGTTGAATTAGACCGTGGACTCGGTGAGCCAAATGAAACAAGCCGTGTTACAAACAAGTTGAGCGATAAACGTAGCCTCAAAACGCGCATCGGAACGGCGCACAATGGTTTCACCGACACTCGTGATCTTTGTAAAAAGACTTGGGGAACTAAGAGTAAtcgaaaaaaacatattgatGCGGTACAAAATACGATCCCTCACGCATGTAGTATTTGCGGAAACAAATTCGCACGAAAGAGTAAtctgaaaaatcatattgaCGCAGTGCATAATGGAGTCAgatatgcatgtgatatttgcggaaacaAATTCGCACGAAAGAGTACtctgaaaaatcatattgaCGCAGTGCATAATGGAGTCAgatatgcatgtgatatttgcggaaagaaatacTCTCAGAAGGATCATCTAAAAGAACACATCGATTTTGCGCATCATAAAATCGTACATGAATGTGATCgttgtggaaagaaattttcagtCAAGAATAATCTAAAAAGACACGTCGATACCGCGCACAATGGCCTTAGAtacgcatgtgatatttgcggaaagaagtACTCACAGAAGAGTGGTCTCAAGAATCACATAGATGTAGCGCACAATGGTATCGCCCCTATTTGTAAGACATGTGGTAAGACATTTGCACGACTGGCTGTTCTCAAAcgccacatcgattcggtacatgataaaatcattcatgaatgtgatatttgcggaaagaaatacTCACAGAAGGGTGATCTCAAGAGACACATGGATGTggcgcacaatggtgtcaGATATGAATGTAATAGTTGCACAAAGAAATACTTGCATAAGAGTGTTCTCAAGAATCACATGGATGTGGCGCACAATGGTATCAGACATGAATGTAGTAGCTGCACAAAGAAATACTCGCATAAGAATgatctcaagaaacacatcgatgtggcgcacaatggtgttagaaatgcatgtgatatttgcgaaaagaGTTTCTCAGATAAGAGTTatctcaagaaacacatcgaTGTGGCGCACAATGGTGTCGCTCATACTTGTGATCTTTGTGGCAAGAAATTTTCAGAGAAATGTAGTCTTAAAAACCACATCGAGTCGCTACATATTGGTATgacacatgcatgtgatacaTGCCAAAAGGTATTCTCATACAAAGGTAATCTCAAGAAGCACATTGATTCTGTGCACAAGCGAGTCAGACATGCATGTGATCTTTGTGGGAAGACATTTTCACTGAGGGGGACtctcaagaaacacatcgTTGTGGCGCACAATggtaataaatatacatgcgATGTATGTGGATCAAAATCCACAACGAAGAGTAATCTCCGAAGACACATTGACACAGTACATAATAAGATCACTCATGCATGCGATACATgcggaaaatcattttcactcAAGAGTAATCTCAAGAGGCACATCGATATGGCGCATCGCATGTGA
Protein Sequence: MNFQTNKMESSGMFNCVVRVKSEPIDVSYAENEYNSIDETLDDKNFEFSRCPQENPIHVLRKSDESHKGELDELAIELECKEQKPKFDLLAVTKIENSFQNHSQHMEDGNGHRVRGEIKIENSGAIKKESFVDDASQLNVELDRGLGEPNETSRVTNKLSDKRSLKTRIGTAHNGFTDTRDLCKKTWGTKSNRKKHIDAVQNTIPHACSICGNKFARKSNLKNHIDAVHNGVRYACDICGNKFARKSTLKNHIDAVHNGVRYACDICGKKYSQKDHLKEHIDFAHHKIVHECDRCGKKFSVKNNLKRHVDTAHNGLRYACDICGKKYSQKSGLKNHIDVAHNGIAPICKTCGKTFARLAVLKRHIDSVHDKIIHECDICGKKYSQKGDLKRHMDVAHNGVRYECNSCTKKYLHKSVLKNHMDVAHNGIRHECSSCTKKYSHKNDLKKHIDVAHNGVRNACDICEKSFSDKSYLKKHIDVAHNGVAHTCDLCGKKFSEKCSLKNHIESLHIGMTHACDTCQKVFSYKGNLKKHIDSVHKRVRHACDLCGKTFSLRGTLKKHIVVAHNGNKYTCDVCGSKSTTKSNLRRHIDTVHNKITHACDTCGKSFSLKSNLKRHIDMAHRM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01485081;
90% Identity: iTF_01485081;
80% Identity: iTF_01485081;