Basic Information

Insect: Trichogramma pretiosum
Gene Symbol: -
Assembly: GCA_000599845.3
Location: NW:508666-511349[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.26 20 4.8 1.2 18 44 173 196 165 196 0.89

2 18 0.26 20 4.8 0.7 18 44 201 224 197 224 0.89

3 18 0.053 3.9 7.0 0.6 18 44 229 252 226 256 0.87

4 18 0.0048 0.36 10.4 1.7 19 44 258 280 252 280 0.93

5 18 0.012 0.87 9.2 1.2 19 44 286 308 283 308 0.93

6 18 0.02 1.5 8.4 0.1 19 44 314 336 312 340 0.91

7 18 0.00046 0.034 13.6 2.1 16 44 339 364 327 364 0.84

8 18 0.005 0.37 10.3 0.6 19 44 370 392 368 392 0.95

9 18 0.0033 0.25 10.9 0.6 17 44 396 420 393 420 0.94

10 18 0.15 11 5.6 0.2 19 43 426 447 424 453 0.91

11 18 0.96 71 3.0 3.2 19 40 454 472 448 480 0.75

12 18 0.19 14 5.2 1.3 14 44 477 504 467 504 0.81

13 18 0.13 9.7 5.8 0.9 17 43 508 531 505 536 0.84

14 18 0.0045 0.34 10.5 0.5 19 44 538 560 533 560 0.94

15 18 0.00048 0.036 13.6 2.1 19 44 566 588 563 588 0.94

16 18 0.033 2.4 7.7 0.4 19 44 594 616 591 616 0.92

17 18 0.12 9 5.9 1.3 19 44 622 644 620 644 0.91

18 18 3.6 2.7e+02 1.2 0.1 19 29 650 660 647 668 0.86

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.26	20	4.8	1.2	18	44	173	196	165	196	0.89
2	18	0.26	20	4.8	0.7	18	44	201	224	197	224	0.89
3	18	0.053	3.9	7.0	0.6	18	44	229	252	226	256	0.87
4	18	0.0048	0.36	10.4	1.7	19	44	258	280	252	280	0.93
5	18	0.012	0.87	9.2	1.2	19	44	286	308	283	308	0.93
6	18	0.02	1.5	8.4	0.1	19	44	314	336	312	340	0.91
7	18	0.00046	0.034	13.6	2.1	16	44	339	364	327	364	0.84
8	18	0.005	0.37	10.3	0.6	19	44	370	392	368	392	0.95
9	18	0.0033	0.25	10.9	0.6	17	44	396	420	393	420	0.94
10	18	0.15	11	5.6	0.2	19	43	426	447	424	453	0.91
11	18	0.96	71	3.0	3.2	19	40	454	472	448	480	0.75
12	18	0.19	14	5.2	1.3	14	44	477	504	467	504	0.81
13	18	0.13	9.7	5.8	0.9	17	43	508	531	505	536	0.84
14	18	0.0045	0.34	10.5	0.5	19	44	538	560	533	560	0.94
15	18	0.00048	0.036	13.6	2.1	19	44	566	588	563	588	0.94
16	18	0.033	2.4	7.7	0.4	19	44	594	616	591	616	0.92
17	18	0.12	9	5.9	1.3	19	44	622	644	620	644	0.91
18	18	3.6	2.7e+02	1.2	0.1	19	29	650	660	647	668	0.86

Sequence Information

Coding Sequence: ATGGAATACTGTGGTTTGTTCGATTGTGCAGACAGAGTTAAAGAGGAGCCTAAGGACGTGCTGCCTAATGAGAATGATTGGGATACGATTGACGAAAAACCAGATCTTAAAAACTTCCAACTCTTACCATCTTTGCAAGAAAATACCATCCTTACTCTTCGAAAGTATGCCGAGAATCATGAACGTAAACTCGATGACGAAGTGGAAATAATCGTAGAATGTGAAGATGTCAAGCTTAACATGGATTTAttcaaagtcgaaaaatttgacatcgattttcaaaatctcTTGCAGGGTAGAAAGAATAATGATGGTTGTAAAACCCAAAACGTAGTTAAAATGGAACCCACGGAGGAAGTACAACAGGCATCTTTTGTGAACACCGCAGAAGaatcgaatttgaatttggTCTGTAAACGTGgcgaacaaaataaaacaagaaaaataacaaaagagTTGAACAACGAACGTAACCACAAAAGACACCAAGGTACGATGCATAATGCTAGAACTTACATATGTGAAACATGCGGCAAAAATTTCGCATCTCAGGGCAATCTGAACAAGCATGTCATATCAGTACATAATTATACTACCCACTCATGTGATACATGTGGCAAGAAATTTGCGCAAAAAGGTAATcttaaaatccacatcgattcagtgcacaatggtgtcagaCATGTATGTGACATTTGCGGAAATGTGTTCAAACGAAAACAGcttctcaaaatccacatcgagtCGGTGCATCAAAAAATCAGGcatccatgtaatatatgccAAAATACATTCTCAAAAAGGAGTAGTCTCAGAAAGCACATCGTTTCCGTGCACAACAAAATCAcgcatgcatgtgatatatgccaaaaTACATTCTCAGGCAAGAACAGTcttaaaaaacatattgatTCGATGCATAGTGGtatcacacatgcatgcgaCATTTGCGGAAATGTGTTAAAACGAAAAGatgatctcaaaaaacacatcgattcggttcACAATCGAGTGCGGCATGTATGTGAcatttgtggaaagacattcacacaaaaaagtaatctcaataCTCACATCGAGTCGGTGCATAAGAAAATTACGCATCCATGTGATGCATGCCAAAAGATATTCtcaaaaaagagtaatctcaaaactcacatcgattctgtgcataataaaatcacgaacacatgcgatatatgccaaaagacattctcagatAAGAGTTatctaaaaaaacacatcgattcaaTGCATAATGGTGGCGgacatgcatgcgatatttgcggaaaCATATTCACACAAAGACAACAACTCAAAACCCATATGGATTCCGTGCATCATAAAATCAAGcatccatgtaatatatgcaAAAAGACATTCGCAGAAAAGggttatctcaaaaaacacattaaTGCGATACATAATGGTTattcacatgcatgtgatacaTGTGGCAAGACATTTGCGCAAAAAGGTAATcttaaaatccacatcgattcagtgcacaatggtgtcaaacatgtatgtgatatatgccaaaagataTTCGCAACGAAAGGTAATTATAAAACCCACATCGAATCGGTGCACAACAAAATCAcgcatgcatgtgatatatgccaaaaTATATTCTCAAGCAAAAGCagtcttaaaaaacacatcgattcgatgcatAGTGGTGTCAGACATGCATGCGATTTTTgccaaaagaaattctcagacaagagtaatctcaaaagACACATTAATGCAATGCATAACGGTGattcacatgcatgtgatatttgtggaaaggCATTCACTCTAAAAGGTAATCTtaaaacccacatcgattcggtgcacaatAGAGTCGgacatgcatgcgatatatgccagaagacattaacaaaaaaaggtaatctcaaaattcacatcgattcagttCATAGAAAAATTGCCCATGCGTGCGATACATGCGGCAAGACATTCGCCTCGAAGCAAACTCGCAAAAAGGATTCGGTACATGCCTCGTGTATTGAAattcgataa
Protein Sequence: MEYCGLFDCADRVKEEPKDVLPNENDWDTIDEKPDLKNFQLLPSLQENTILTLRKYAENHERKLDDEVEIIVECEDVKLNMDLFKVEKFDIDFQNLLQGRKNNDGCKTQNVVKMEPTEEVQQASFVNTAEESNLNLVCKRGEQNKTRKITKELNNERNHKRHQGTMHNARTYICETCGKNFASQGNLNKHVISVHNYTTHSCDTCGKKFAQKGNLKIHIDSVHNGVRHVCDICGNVFKRKQLLKIHIESVHQKIRHPCNICQNTFSKRSSLRKHIVSVHNKITHACDICQNTFSGKNSLKKHIDSMHSGITHACDICGNVLKRKDDLKKHIDSVHNRVRHVCDICGKTFTQKSNLNTHIESVHKKITHPCDACQKIFSKKSNLKTHIDSVHNKITNTCDICQKTFSDKSYLKKHIDSMHNGGGHACDICGNIFTQRQQLKTHMDSVHHKIKHPCNICKKTFAEKGYLKKHINAIHNGYSHACDTCGKTFAQKGNLKIHIDSVHNGVKHVCDICQKIFATKGNYKTHIESVHNKITHACDICQNIFSSKSSLKKHIDSMHSGVRHACDFCQKKFSDKSNLKRHINAMHNGDSHACDICGKAFTLKGNLKTHIDSVHNRVGHACDICQKTLTKKGNLKIHIDSVHRKIAHACDTCGKTFASKQTRKKDSVHASCIEIR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01485054;
90% Identity: iTF_01485054;
80% Identity: iTF_01485054;