Tpre008030.1
Basic Information
- Insect
- Trichogramma pretiosum
- Gene Symbol
- -
- Assembly
- GCA_000599845.3
- Location
- NW:160895-164004[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.00077 0.057 12.9 2.1 18 44 160 183 151 183 0.90 2 17 0.17 13 5.4 0.6 18 43 188 210 184 215 0.88 3 17 0.0016 0.12 12.0 0.3 18 44 216 239 211 239 0.91 4 17 0.0013 0.093 12.3 1.0 19 43 245 266 242 267 0.94 5 17 0.0019 0.14 11.7 0.5 18 44 272 295 269 295 0.91 6 17 0.0058 0.43 10.1 1.6 18 39 300 318 297 322 0.84 7 17 0.026 1.9 8.1 1.1 17 43 326 349 314 350 0.82 8 17 7e-05 0.0052 16.3 1.3 18 44 355 378 351 378 0.93 9 17 0.014 1 8.9 0.3 18 44 383 406 380 406 0.92 10 17 0.55 41 3.8 1.3 18 43 411 433 409 438 0.83 11 17 0.23 17 5.0 4.6 18 44 439 462 433 462 0.89 12 17 0.29 21 4.7 4.1 18 44 467 490 465 490 0.91 13 17 0.027 2 8.0 1.4 18 43 495 517 493 518 0.92 14 17 0.0029 0.21 11.1 1.2 14 44 519 546 517 546 0.87 15 17 0.29 21 4.7 3.3 19 43 552 573 549 574 0.80 16 17 0.0065 0.48 10.0 0.1 18 43 579 601 577 602 0.93 17 17 0.014 1 8.9 0.5 18 43 607 629 603 630 0.93
Sequence Information
- Coding Sequence
- ATGGAATCGAGTGATATGCTTAATTGTGCTGTGAgAGTGAAGGAGGAAACGATTGATGTCTCATTTCTTGAAAATGAATGTGAAATGATTGACGAGAAACCCGATGTCAAAAACATCCAACTTTTACCATTTTCGTTGGAAAAACCAGCTCACAAACTTCGGGAATATGACGAAAATCAAGAAACTGATATAAATGACGAAATGGAGATTGAATTCGAGTGTGTAGACGTCAAGCTCACTATGGATTTAttggtaaataataaatccGATGAATATTCTCGAAATCACTTACAGCTTACGAAATATAGCAAGGATTATcagaatcaaaataaaattaaagaggAAACTGTGGcggaagtgaaaaaagaagtgaatttgaattttgattatgAACTTAACgggagaaatgaaaaaatgaatgacaTTGAAAAGTTGAAAGATGGACTCGAAATAAGAACCGAAAAGGTACATAGACATGAGTGtaatatttgcggaaagacatttccaaaaaaaagtaatcttaaAACACACATTGATGCGGCGCACAATGGTACCACCCATACCTGTGATACGTGTGGTAAGACATTTGCACGACTGGATGTTCTCAAACGCCACATCCTTTCGGTACATGATAAAATCTGtcatgaatgtgatatttgcggaaagaagtACTCAGATAAGGGTAatctcaagaaacacatcgaTGTAGCGCACAATGGTATCATCCATAGCTGTAAGACATGTGGTAAGACATTTGCACAAATAGGTAATCTCATACGCCACATCAATTCGGTACATGACAGAATTACtcatgaatgtgatatttgcggaaagaagtACTCAGATAAGGGTAatctcaagaaacacatcgaTGTAGCGCACAATGGTGTTAGACATGAGTGtaatatttgcggaaagacattttcaaaaaaaagtagtctTAAAACACACATTGATGCACACAATGGTATTGCCTTTATTTGTAGGACATGTGGTAAGACATTTGCACAACTAATTACTCTCAAAcgccacatcgattcagtacatGACAAAATCACACATGAATGCaatatttgcggaaaaaaattctcagacaagagtaatctcaagaaacacatcgaTGTGGCGCACAATAATGTCACCTATACTTGTGAtgtgtgcgaaaaaaaattctcgacgaATAGTAATCTCAACGAACACATCAATGTAGCGCACAATGGTGTTAGacatgaatgtgatatttgcggcaaGTCCTTTACTCACAAAGGTtatctcaaaacccacatcgattcggtacataataaaatcattcatgaatgtgatatttgcggaaagaaatgcTTAACTAAGAGTAACCTTAAATCACACATGGATGTGGCGCACAATGGTATCAGACATGAATGTAATAGCTGCACAAAGAAATACTCGCATAAGAGTgatctcaagaaacacatcgaTGTGGCGCACAATGGTATCACCCATAGATGTAAGACATGTGGTAAGACATTTGCACGACTTTATGTTCTCAAACGCCATATCAATTCGGTACATGACAAAAACACTCATGAATGTGAAatatgcgagaagaaatacTCAGATAAGAGTGatctaaaaaaacacatcgatgtgGCGCACAATGGTGTTAGACATGCATGTAGTATTTGCAGAAAGacatattcaaaaaaaagttatcttaACACACACATTGATAATGCGCACAATGGTATTGCCCCTATTTGTAAGACATGTGGTAAGACATTTGTACGACTAGATGTTCTCAAACGCCATATGAATTCGGTACATGACAAAGTCACtcatgaatgtgatatttgcggaaagaaattcttatataaaataaatctcaaaaaacacattgatTCGGTACATGATAAAGTAGCgtag
- Protein Sequence
- MESSDMLNCAVRVKEETIDVSFLENECEMIDEKPDVKNIQLLPFSLEKPAHKLREYDENQETDINDEMEIEFECVDVKLTMDLLVNNKSDEYSRNHLQLTKYSKDYQNQNKIKEETVAEVKKEVNLNFDYELNGRNEKMNDIEKLKDGLEIRTEKVHRHECNICGKTFPKKSNLKTHIDAAHNGTTHTCDTCGKTFARLDVLKRHILSVHDKICHECDICGKKYSDKGNLKKHIDVAHNGIIHSCKTCGKTFAQIGNLIRHINSVHDRITHECDICGKKYSDKGNLKKHIDVAHNGVRHECNICGKTFSKKSSLKTHIDAHNGIAFICRTCGKTFAQLITLKRHIDSVHDKITHECNICGKKFSDKSNLKKHIDVAHNNVTYTCDVCEKKFSTNSNLNEHINVAHNGVRHECDICGKSFTHKGYLKTHIDSVHNKIIHECDICGKKCLTKSNLKSHMDVAHNGIRHECNSCTKKYSHKSDLKKHIDVAHNGITHRCKTCGKTFARLYVLKRHINSVHDKNTHECEICEKKYSDKSDLKKHIDVAHNGVRHACSICRKTYSKKSYLNTHIDNAHNGIAPICKTCGKTFVRLDVLKRHMNSVHDKVTHECDICGKKFLYKINLKKHIDSVHDKVA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01485042;
- 90% Identity
- iTF_01485042;
- 80% Identity
- iTF_01485042;