Tpre009908.1
Basic Information
- Insect
- Trichogramma pretiosum
- Gene Symbol
- Rel
- Assembly
- GCA_000599845.3
- Location
- NW:616820-622714[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.9e-40 9.2e-37 126.1 0.5 1 168 81 272 81 273 0.90 2 2 1.1 1.8e+03 -1.7 0.7 100 135 712 762 675 778 0.56
Sequence Information
- Coding Sequence
- ATGACTGACgcgtatgaaaattttattaattacaaacATAACATGCTGCGTTTATCGCCGGCACCggctgaacattttttcacctACAGCAATGaTTTTGGAATCATGAGTTCAGCAGGCTACAGTCCTGTCTCAATGGGAAGCCAGACAATGGATATGGAAGATTTTCCATCAGAAATAATAAGTGCTACTGATGATCAATCTCAAAATGTTGATATAAGCATTTGCGAAAAGACTAAGATCAAAATTCTAGTTCAACCTATTGATAAATTTCGCTTTAGATATAAGTCTGAAATGCTTGGAACTCATGGCAGTCTTTTAGGAGATAAAGACAATAATCGTCACAAAAGAGATGTCCCTACTGTACAGttatttaatTGTCCATTCAAAAAGGCTGTTATAAGATGCACTATTGTGACTGCAAATGAAGATAAAAGATTCCCACATGCACATcgtttagttaaaaaaaattcttcagaTGATACAGATGATCCTCATGATATAGAAGTTTCTGCTGAAAACGATTATACTGCaacgtTTTATAACATGGGAATAATTCACACTGCAAAAAAGCACATTAAAGatgaaatttatagaaaaagaagaatggAGTtattagaaacaaaaaaaagacaggATCCAAGTAATGTTGTTATTTCAACCCGAGAAGAAATGAAGTTGCAATCAGAAGCagagaatgcaaaaaattggATGAATTTGAATTCTGTAGCACTCTGTTTCCAAGGGTATATACATAGCAGTAACAATGCATTAATACCATTTACTGAGAAAGTATACTCTCGACCCATCAATAACTTAAaaagtGCATTAACAGGAGAACTGAAAATATGTCGCATCGATAAAAGTTTTGGTTGTGTGGATGGTAATGATGAAATTTGGATTCTAGTTGAGAAAGTTGGTAAAAaAAATATAAGGGTAAAGATTTATGAGTTAGATGAGGATACTGACAATACAATTTGGGAAGctgatggaaaattttcagaattagATGTTCATCATCAATATGCAATTATATTTAGAACTCCTCCATACAAAGATACTTCTACAACTGAACCAAAAGAAGTATTTATTAGATTAGAAAGGCCATCTGATGGAGAATATTCAAATAGTGTAAAATTTACTTATAAACCATCTGACAAAATATTAAataGAAAACGACCTCGATTTGAACAAAGTGGTTGGAAATCAAATAATTTGGATGATCCAAAATCTCTTAATATAAATGCGGTAGAAATGATTAAACATAATCCCACTGAAACAGCCgctgaaatacaaaaaattcttcatgaAGATTATTCAGCTGACTTGGAAGCAATGGATCCTTTCTTAGGTGAAGGGCTAGATAACTGGCTAGCTTTATTAGCAAACTCAAAGAATCCTATGCTTGATACTGATATTGTTACTGACAGTGCTGATGTGGAGTTGAAACATTCAGAGAGATTTGCCGacaatatattatttgaaattttaaaaattcttcaaatttcTCAAAGTACCAAGCAATATAAATCCGATTCATCAACTAAAATACGCAATTTATTGCAACAAGTGACTTATTATGGTGACACAccattacatttttctttacgtTATAATCAATATGAATgtaccaaaaattttattagattaATGGCAGTTGATTCAACTTTGAGACCGATAGCTAACATTCAAAATAGCAGTGGAGAGaCTCCTCTCCATTTTGCTGTAAGGGCTGATCAGCCAGAAACTGTGCAAGCTCTTTTAGTTCTTGATGCCAATCCAAATATTGGTGATGAAAATGATTACACACCACTGCATCGGGCGATTGTTGGTGGATACAATACTTGCTTaaagattttattgaaatattcaagcaAATTAAATCTAGATTCTTTATCCGATTCTGGATGGGCACCTTTACACATGGCTGCTAAAACTGGATCTTTAGACGCTGTTAAAGCTCTCATTAAATCTGGAGCCAATGTTAACATTACTGATAACTCGTATGGCCGTTCAGCTTTGCACATTGCCGTGGATCACAACCACTTAcatattgttaaatttttagtgGAAAATACAAAAATTGaagttaatatgaaaaatatgggTGGTAATACTGCATTACACACCGCTGCAGTTAAAAAATGCGAGATTGGTGAAAAGTTAGTTGAGTTACTAAAAAAACATGGGGCTCTTTCGAATTTACGTAATAATAGCGAAAATCACCAGACACAGAATGAGACAAGCATCAACTTCGATGTAACGCAAAACACCAATGATATAGATATACAGGATGAACACTCATTAATGATTAAGAGCGAGGTAGaaagcgaagaagaagacgaagaagattCATGTGAAGAGCCTGCAGAGCCTTTTTCGAAAGATGCTCAAAGACTGATGGAGTTATTAAATGCACCGCAACCATACTTACGTCTAGAAGAACTAGTTCTCAAGGAAGAAACTGAGTCATCGGACGACGATCTGCCTTTACAGGAAAGATTGAATTTGAGCTTACCAGATAAAGTTCGAAGGACTACTTCGAAGACGAGCTCTTCTTCCAAAACTGAGATACCAGCTACAGAAAACCGTAAAAggaatgattcaaaaattctAGTTAAAGCTGCCGATCCAGTTTTAATACAAAAGCAGTTAGATCAGTTGAGGAAGAATGAGGTAAAGTTTACAAAAGAGCACGTCAATGCGATCAAAGAAATATTGGATAGTACAGGTGTATGGGAAAAATTGGCGCATCACACGAACCATGGCACGTTTATACGCTTGTACAAGAAAACGAGTAGCCCATCGACGGCATTATTCACGAAAATTTTGttaCAGATGCCAGATACTTCGGTCCgccaagtaaaaaaatggcTCATAGATATAGAAGCATTCGAAGCTGCTTCGGCGTTAGAagaagtataa
- Protein Sequence
- MTDAYENFINYKHNMLRLSPAPAEHFFTYSNDFGIMSSAGYSPVSMGSQTMDMEDFPSEIISATDDQSQNVDISICEKTKIKILVQPIDKFRFRYKSEMLGTHGSLLGDKDNNRHKRDVPTVQLFNCPFKKAVIRCTIVTANEDKRFPHAHRLVKKNSSDDTDDPHDIEVSAENDYTATFYNMGIIHTAKKHIKDEIYRKRRMELLETKKRQDPSNVVISTREEMKLQSEAENAKNWMNLNSVALCFQGYIHSSNNALIPFTEKVYSRPINNLKSALTGELKICRIDKSFGCVDGNDEIWILVEKVGKKNIRVKIYELDEDTDNTIWEADGKFSELDVHHQYAIIFRTPPYKDTSTTEPKEVFIRLERPSDGEYSNSVKFTYKPSDKILNRKRPRFEQSGWKSNNLDDPKSLNINAVEMIKHNPTETAAEIQKILHEDYSADLEAMDPFLGEGLDNWLALLANSKNPMLDTDIVTDSADVELKHSERFADNILFEILKILQISQSTKQYKSDSSTKIRNLLQQVTYYGDTPLHFSLRYNQYECTKNFIRLMAVDSTLRPIANIQNSSGETPLHFAVRADQPETVQALLVLDANPNIGDENDYTPLHRAIVGGYNTCLKILLKYSSKLNLDSLSDSGWAPLHMAAKTGSLDAVKALIKSGANVNITDNSYGRSALHIAVDHNHLHIVKFLVENTKIEVNMKNMGGNTALHTAAVKKCEIGEKLVELLKKHGALSNLRNNSENHQTQNETSINFDVTQNTNDIDIQDEHSLMIKSEVESEEEDEEDSCEEPAEPFSKDAQRLMELLNAPQPYLRLEELVLKEETESSDDDLPLQERLNLSLPDKVRRTTSKTSSSSKTEIPATENRKRNDSKILVKAADPVLIQKQLDQLRKNEVKFTKEHVNAIKEILDSTGVWEKLAHHTNHGTFIRLYKKTSSPSTALFTKILLQMPDTSVRQVKKWLIDIEAFEAASALEEV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01483609;
- 90% Identity
- iTF_01483609;
- 80% Identity
- -