Basic Information

Insect: Trichogramma evanescens
Gene Symbol: Trl
Assembly: GCA_902732785.1
Location: CACVKI010144449.1:7369-11377[+]

Transcription Factor Domain

TF Family: zf-GAGA
Domain: zf-GAGA domain
PFAM: PF09237
TF Group: Zinc-Coordinating Group
Description: Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 1 1.9e+04 -4.9 1.2 17 28 276 287 274 288 0.81

2 3 5.2e-11 1e-06 28.9 1.5 14 44 299 329 293 336 0.93

3 3 2.2e-21 4.3e-17 62.1 0.1 16 50 371 405 365 408 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	1	1.9e+04	-4.9	1.2	17	28	276	287	274	288	0.81
2	3	5.2e-11	1e-06	28.9	1.5	14	44	299	329	293	336	0.93
3	3	2.2e-21	4.3e-17	62.1	0.1	16	50	371	405	365	408	0.94

Sequence Information

Coding Sequence: ATGGGTAGCACCAATCAACAACTGTACAGCTTGCACTGGAATGATTATGGCTCATCTCTAACTTCTGCTGTGCAACATCTTCGCGGACACGGAGATTTAGTAGACGTGACACTAACAGCTGGTGGAAGACATTTTCCTGCGCATAAAATTGTACTATCTGCGGCGAGTCCTTTCCTCCTTGAAATTCTGAAGACGACACCATGCCAGCATCCAGTGGTTATGCTTGCTGGTATTAGTGCAGATGATCTAGAGGCTATTTTAGAATTTGTGTACAGAGGACAAATAAGCGTGGAGCCCTCACAGTTGCCTTCGCTGTTGCAGGCAGCGCATTGCCTCAGCATTCACGGTCTTGCACCACCAACCATCATGACAGAGaAAGGAGAAGAAATTCCTCTCTCTTCTATACCTGGCTGTAATGACATTGCTACAGCCAGGGAAACACTTGATGCCTATCGAGCTCAGCatcgaagaaagaaaaagaggaaacaaGAAGGTGGTGGTGGAAAGTGGCCCAGAGCTGGATATCATTCAAGCCTTGATTCTAGATCCTTAGATTCAGAAGATAATAGGTCATTAGATTACGGACACAAAGATGGAACTGACGATGAAGTGAAACACCGATCTGAACATGCAAACCACCACATGCCAACGCCATTGCCACATCAACTGGTGCACCCTGTGATTGAACACAACCCATCAGCCTTGATAGGAGATGCTGAAGTGGAACCACATTTGCATAACCTTATGCCTATGCAGCCGTACTCTCCACTACATATTCCACAATTTACTGGAGGCATTCAGAATGTTCCATACTCTCCAGCTCCAAGTAGTAGTTCATCCGTACAGCCGACTGCAGCTCCAAGTAACTCGACGTCTTCATCTACAACTCAATCAACACCTAAAATTCGTGGAGCATCAGATTGTCCAGGAGTTTGCCCCTTGTGTGGATCAACTTTGCGTCAAGCCAGAAATTTGCGTCGACATCTGTTATCTTCATGCAAGTATCGGTTTTCTGCAAACTCCGGTCAAATGATGCCAAACAATATGTCTATGGAAGTCAAGTCCGAGGGTTCTAATGTTGTCTCACCACATAGCAGAGACTGGAACTCGAAATCAAGAACTTTGTCTGATCAACCAGCTACTTGTCCGTTATGTGGAGCTGTCATACGACAGTCAAGAAATTTGCGAAGACATTTGGAACTGTTGCATTTTGGCGTTGGTTCTGGAAAATCGCGTAGTAAAAAGGACAAAAATAAGGATAAAGATAAGGACTATATTCCAAAATCATCATCATATTCTAGAGCAACTTTAACTCTGAGAGATAACCCAAAGTCTGATTATGCAGACTATCCCGGTGTATCTTCTTTAAGTTTAAGTTCAAGCATCCATCCCAATCCATCTAATGTTCCAGGTACGTCTTTCATGCTATCTGGTACAGGAGGGCTTGCTCCACCACCGCCAGCTCCTGATCACTCGCACCATCACTCCCATCATAATCCGAATTCTTTAACAGCTACGAACTGTCCACCCGTATCCTCGATTCCACCAACGATGCCAAATAATAGCATATACTCCGCCTCTGATTCTGCGAGCATGCTCAGCTCTCTCTTTCCTACATTGCCCTCGTTACCGACTCTTTCGAATCCTCACGATGTCTTCCGCCATTCAGAGTTCCTGAGGGCCAACATGGGCTATCCTCAGCAACAGCAACCTCCTCCAGGACGACATTTGCAGCGCACTGATGTTACGTGA
Protein Sequence: MGSTNQQLYSLHWNDYGSSLTSAVQHLRGHGDLVDVTLTAGGRHFPAHKIVLSAASPFLLEILKTTPCQHPVVMLAGISADDLEAILEFVYRGQISVEPSQLPSLLQAAHCLSIHGLAPPTIMTEKGEEIPLSSIPGCNDIATARETLDAYRAQHRRKKKRKQEGGGGKWPRAGYHSSLDSRSLDSEDNRSLDYGHKDGTDDEVKHRSEHANHHMPTPLPHQLVHPVIEHNPSALIGDAEVEPHLHNLMPMQPYSPLHIPQFTGGIQNVPYSPAPSSSSSVQPTAAPSNSTSSSTTQSTPKIRGASDCPGVCPLCGSTLRQARNLRRHLLSSCKYRFSANSGQMMPNNMSMEVKSEGSNVVSPHSRDWNSKSRTLSDQPATCPLCGAVIRQSRNLRRHLELLHFGVGSGKSRSKKDKNKDKDKDYIPKSSSYSRATLTLRDNPKSDYADYPGVSSLSLSSSIHPNPSNVPGTSFMLSGTGGLAPPPPAPDHSHHHSHHNPNSLTATNCPPVSSIPPTMPNNSIYSASDSASMLSSLFPTLPSLPTLSNPHDVFRHSEFLRANMGYPQQQQPPPGRHLQRTDVT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01484005;
90% Identity: iTF_01484005;
80% Identity: iTF_01484005;