Basic Information

Insect: Trichogramma evanescens
Gene Symbol: -
Assembly: GCA_902732785.1
Location: CACVKI010145903.1:27565-31750[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 3.9e-05 0.0033 17.9 3.2 1 23 346 368 346 368 0.97

2 17 0.054 4.6 8.0 2.2 2 23 398 419 397 419 0.96

3 17 7.3e-06 0.00062 20.2 2.8 2 23 531 552 530 552 0.97

4 17 2.8e-06 0.00024 21.5 2.0 1 23 554 577 554 577 0.96

5 17 0.0065 0.55 10.9 0.1 3 21 584 602 582 606 0.91

6 17 0.0084 0.7 10.6 0.6 1 23 683 705 683 705 0.94

7 17 3.8e-05 0.0032 17.9 3.8 1 23 757 779 757 779 0.97

8 17 0.00059 0.049 14.2 0.8 1 20 784 803 784 805 0.94

9 17 0.0015 0.13 12.9 0.8 2 23 816 837 816 837 0.97

10 17 8.9e-05 0.0075 16.8 2.4 2 23 875 896 874 896 0.97

11 17 9.6e-05 0.0081 16.7 0.4 1 23 901 923 901 923 0.95

12 17 6.8e-06 0.00058 20.3 0.8 1 23 929 951 929 951 0.98

13 17 3.3e-05 0.0028 18.1 0.4 1 23 967 989 967 989 0.95

14 17 5.2e-07 4.3e-05 23.8 0.9 1 23 995 1017 995 1017 0.99

15 17 3.9e-05 0.0033 17.9 0.2 1 23 1023 1045 1023 1045 0.97

16 17 0.00011 0.0092 16.5 4.9 1 23 1051 1073 1051 1073 0.97

17 17 0.0054 0.46 11.2 0.4 1 20 1079 1098 1079 1100 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	3.9e-05	0.0033	17.9	3.2	1	23	346	368	346	368	0.97
2	17	0.054	4.6	8.0	2.2	2	23	398	419	397	419	0.96
3	17	7.3e-06	0.00062	20.2	2.8	2	23	531	552	530	552	0.97
4	17	2.8e-06	0.00024	21.5	2.0	1	23	554	577	554	577	0.96
5	17	0.0065	0.55	10.9	0.1	3	21	584	602	582	606	0.91
6	17	0.0084	0.7	10.6	0.6	1	23	683	705	683	705	0.94
7	17	3.8e-05	0.0032	17.9	3.8	1	23	757	779	757	779	0.97
8	17	0.00059	0.049	14.2	0.8	1	20	784	803	784	805	0.94
9	17	0.0015	0.13	12.9	0.8	2	23	816	837	816	837	0.97
10	17	8.9e-05	0.0075	16.8	2.4	2	23	875	896	874	896	0.97
11	17	9.6e-05	0.0081	16.7	0.4	1	23	901	923	901	923	0.95
12	17	6.8e-06	0.00058	20.3	0.8	1	23	929	951	929	951	0.98
13	17	3.3e-05	0.0028	18.1	0.4	1	23	967	989	967	989	0.95
14	17	5.2e-07	4.3e-05	23.8	0.9	1	23	995	1017	995	1017	0.99
15	17	3.9e-05	0.0033	17.9	0.2	1	23	1023	1045	1023	1045	0.97
16	17	0.00011	0.0092	16.5	4.9	1	23	1051	1073	1051	1073	0.97
17	17	0.0054	0.46	11.2	0.4	1	20	1079	1098	1079	1100	0.89

Sequence Information

Coding Sequence: ATGGACGGCGTCGTCGTGGAAATGTCGTCGTCATCTTcttcaacgacgacgacggtggtcCGCAGGACGTCCGCGCCCGGGGAGAcgacgtcgccgtcgtcgttggACGCTCAGCTGGCTGCAGTCTCGAACTCCACGGACGGGATTTGTCGCGTCTGCTTGGCCGACCTCGTCGAGCAACCGGCCGTTCACCAGCTCTTTCACGCCCTGGCTTACGAGAACCAGTCGTTGGCCGACAAAGCTATGAGCTTAGCCAACGTCAAGATGCTACTCGGCGATGGCCTGCCCGCTCAGATCTGCGTGGACTGCAGCAACAAGCTCGATATGGCTTACAAGTTCAAGATTCAAGTGCAGCAAGCCGACGCCGTTTTGAGGGAACGATTTTTAAAGGCCGACCTTTTCTTTGAGAACGTCAACATGACACATGCAACTACTGATCACGTAATGACCCCTGCAAATATGTTCATGAACCAAGAAACCAACCACATGCACACCCACATTATCCACAACGATTGCAATGGCAAAAGCAGTGTATTGCATAAACATACGAGTGTAGCTTATCAAGATGATCAGCAGCACATTCAAAATAAGAATATCGACATTCAACACCAACAGCAGGGTcataaaattatgcaaattgcAGTTTCTAACGATAATCACTCTTTTGAGACACAAGAGTTGCAAGATTTTATGTTCAGTGAAATGAACGAGCAAACAAGACTGGCTATACACGAACATAATTATGTTATGGAGTCACAAGTTTGTGATTTTCAACACAAGGATGCAGACTTTAACTCACAGGTTGAGATCAAGTTGGAACAAAATGAATTGTTGAACGAGACAACTGATAATCAAATGGTGATTGATGCAAAAATGACAGAAACTGTATCAGATCAAATGTGTCAAAATGGCAGGCTTATTCAATCTGAAGGAAAAGAAGGTTGCTTGCAATCTAATGAAGAAGATTATTATGAAGACTTGAACCTCAGtttacgattaaaaaaattgcaagtgAAAATATctgataatatattttttatgtgttATGTTTGCGATAGACATTTCAAATCAAAAGAGTTACTTAAAGAACATATGAGTTCTCATgaagaattaagaaaaacatttGATGTAGCAATGAAAGTTCAAGATATCGATGATCAAAACAAACCTTCAAATGGCAAATGTCAAAATAAATGTCCACATTGTGGGAAAGaatatttgtacataatatcttttaaaaaacatttgaagCAACACGAAGAGGAAGGAAAGTTTTCAGGAGTTCCATTTGAAGAGGATGATGGTATCTTAAACTTTTCCGAATATCATCAAAGTATCAATACAGATTTTGATAGCGATACTAATGATAATGACCAGACTTTGACAAAAACACATGGCAAAAtagaatgtgagatttgtggAGATGAGCAAGATTCAATTGAAAGCTTAAATGAGCACAAATCCAAACATGTTTTAGAAGGATTAATTCCAAAAGAAGACACTAACAACAGTATTGAGTACATACTGCCTGaaaattctgatgatcaaaaatatttgacagAAAAAGATTTCTcagaaaattgtaatttaaaatgtcCTCATTGTCCTCAATTTTTCACACAACAGAAATCACTCACTAAGCATTTAGAGTCTCATCGGTACAGCTGTAAAATATGTTCTCAAACATTCTCCAGAAAAGATACTTTGAACAAACATCTGCAAGAACAGCATAATATGAAAGGTTTTGGTTGTAACGAATGTGGCAAGATATTTGGTAATGAATTAGCTCTGCGAAATCATTTGATAGCAACTAATCATAAAACTACGGTGCACGGTAAGGAGTACGATCCGAATAAAAGATTAACGCGAGTTGCAGCCAAAGCCGCTCagaaaattatcaataaactGACTGACGATTTAAACCAAAAAGGCGATGAAGAAggagatgaagaagaagaagaagaactgAAAGAAAAGCCTATGCAAAATTCCATTATTAAGATAGAGGGATCGccgccgaaaaaaattcatctgaCTTCGAAAGTCTATACATGTGATGTATGCAATGATAAATTTCCATCAAAACAGTCTCTCGCCAAACACGCCAGTTTTCATTCTAAGAATGATAAGGAAGTCGAAATGCAAGCTTCTGCAGAGCAAGAACATTTGGAGCAACACGAAATGAACAATGTGCCGAAAAGCAGAGAAAATTtagacgatgacgacgacgacgataactTCAATAGCGGAGATTGGCTGATGGATATACACGAATGTCCAACATGTAAAAAGCGCTACAGTACTAAAAAGTCATTACTGCGACATCAATTACTGCACGACGAGCCAAACTTTGAATGCGACATTTGTAATGTCAAGTTCTTTAGAAAGGACAAACTCAAAGCTCACTACGACAAATGTTCAGAAAAGAATCCAGATCAAGTGAGAAAATGCAATCTTTGTGGAGATACTTTTGAAAGTAACGaagctttgaaaaaacatagaGTAAAACATGTTGTTGAAGGTATATTGACCGAAGAAGATTTGAGAGATATTGAAAACCGAactgaagataaaaaaatagaaaaaatgccgagaaaaagaagaacagaTATTATTGGATTAAAGTGTCATTTATGTAATAAAGAATATACTTCCCGCAAAGGTTTATTACGTCATTTGCAGGTCCATGAGGGTAAAAAGTATCTTTGTGACATGTGTCCTCAAAAATTCTCTCGTCGTGAGGACTTGAAACTACACGTAGCTAAACACAATATGATCAAGCCGTACAAGTGTCCACGCTGTCCCAAGCGCTTTATCAAAGAAGAGCAGTTGAACAATCATATAACCAGACACGATCGGCCCGCTAAAAAACCAAAAGATGCAGATTATCCCAAGAGATATCTCTGCGAAGTTTGTTCGAAAAGTTTTACTCAATACACTACTCTTGTCGCCCATTTGCGAGCGCACAATGGCATCAAACCCTACGTTTGTCAAGTGTGTACGAGACCCTTCACTACGAATGCGTATCTCAAAATGCATATGCGCACCCACACGCAAGAGCGACCCTACATTTGTCAATATTGTTCTCGAGCCTTTGCCAGGGCTGATACGCTGGCGAATCACTTAACTTCTCATACTGGAGAAGCTAAATACCATTGCAATGAGTGTCCGAAACACTTCAGAAGATTGAAGTCATTGAAGGAGCACATATTTATTCATACTGGTCAAAGACCCTATGCGTGTCCTACTTGCGACCGAACGTTCAACAATAATGGGAGCAGGTACGCTCATAGCAAAAGATGCAAGCAGAACCTGTTACAAGCGTCATCGAGCAGGCTCATGATTCAATCGCAGCAGCAATCTGAACAGCATCAAGTTCAGGAACAAGAACAGCATCTCGATCAGCTGCAGGATTTACAGCAGTCAGAGCAACAGCACATTATCATTGGAACAGCTTTAGAGGAGCAGACTCAGCAGATAATAATTGAACATGATCAAGAGCAAAGACTTCAAATAATTAAACCGCAGAATATTATAACAATAACTAAACCTGATGGTACTATGAGTCAACAACACTTGGTTTCTCAGGAAGTACTCATGCCTTTGCTACTGCCACTTTCCGTAACTTTGACTGAAGTTGATGAGGACGCCATTCTACCGGAAggttctaaaatttttacaacttgA
Protein Sequence: MDGVVVEMSSSSSSTTTTVVRRTSAPGETTSPSSLDAQLAAVSNSTDGICRVCLADLVEQPAVHQLFHALAYENQSLADKAMSLANVKMLLGDGLPAQICVDCSNKLDMAYKFKIQVQQADAVLRERFLKADLFFENVNMTHATTDHVMTPANMFMNQETNHMHTHIIHNDCNGKSSVLHKHTSVAYQDDQQHIQNKNIDIQHQQQGHKIMQIAVSNDNHSFETQELQDFMFSEMNEQTRLAIHEHNYVMESQVCDFQHKDADFNSQVEIKLEQNELLNETTDNQMVIDAKMTETVSDQMCQNGRLIQSEGKEGCLQSNEEDYYEDLNLSLRLKKLQVKISDNIFFMCYVCDRHFKSKELLKEHMSSHEELRKTFDVAMKVQDIDDQNKPSNGKCQNKCPHCGKEYLYIISFKKHLKQHEEEGKFSGVPFEEDDGILNFSEYHQSINTDFDSDTNDNDQTLTKTHGKIECEICGDEQDSIESLNEHKSKHVLEGLIPKEDTNNSIEYILPENSDDQKYLTEKDFSENCNLKCPHCPQFFTQQKSLTKHLESHRYSCKICSQTFSRKDTLNKHLQEQHNMKGFGCNECGKIFGNELALRNHLIATNHKTTVHGKEYDPNKRLTRVAAKAAQKIINKLTDDLNQKGDEEGDEEEEEELKEKPMQNSIIKIEGSPPKKIHLTSKVYTCDVCNDKFPSKQSLAKHASFHSKNDKEVEMQASAEQEHLEQHEMNNVPKSRENLDDDDDDDNFNSGDWLMDIHECPTCKKRYSTKKSLLRHQLLHDEPNFECDICNVKFFRKDKLKAHYDKCSEKNPDQVRKCNLCGDTFESNEALKKHRVKHVVEGILTEEDLRDIENRTEDKKIEKMPRKRRTDIIGLKCHLCNKEYTSRKGLLRHLQVHEGKKYLCDMCPQKFSRREDLKLHVAKHNMIKPYKCPRCPKRFIKEEQLNNHITRHDRPAKKPKDADYPKRYLCEVCSKSFTQYTTLVAHLRAHNGIKPYVCQVCTRPFTTNAYLKMHMRTHTQERPYICQYCSRAFARADTLANHLTSHTGEAKYHCNECPKHFRRLKSLKEHIFIHTGQRPYACPTCDRTFNNNGSRYAHSKRCKQNLLQASSSRLMIQSQQQSEQHQVQEQEQHLDQLQDLQQSEQQHIIIGTALEEQTQQIIIEHDQEQRLQIIKPQNIITITKPDGTMSQQHLVSQEVLMPLLLPLSVTLTEVDEDAILPEGSKIFTT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01482884;
90% Identity: iTF_01485179; iTF_01482884;
80% Identity: -