Teva017520.1
Basic Information
- Insect
- Trichogramma evanescens
- Gene Symbol
- TFIP11
- Assembly
- GCA_902732785.1
- Location
- CACVKI010139174.1:27601-28779[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.26 1.7e+03 -1.6 0.1 3 69 39 105 37 116 0.70 2 2 5.7e-42 3.6e-38 131.8 9.7 1 210 150 357 150 368 0.90
Sequence Information
- Coding Sequence
- ATGGCtcataaaaaagtagaagTTTCAGCAGTTGGGTTTGGTGACAATGACAGTGATGATTTATTAACAAAGCCATCCTGCAAAAGGCAACGGTTAAAATTAGAAGAAGTTGGAAGTGtagctaaaaaatttaaagactGTACCGAAGCAACAAAGTCATCATACCAAAGGCAACAATTACAACCAGAAAATCGTTCATCAATTTTGTATTATAGTGACGATGATAGCGATTCAGCTGAATCATTTGAAGACTGTACCGAAGCAACAAAGAGTTATTATCAGTATGAAAATGCTCTTGAAAAGCAACAAGAACTTGATGATAAAGCTGTATCTGATGATGAAACAATTATAGCTTCAACTTGCAAAGAATCACAGCAATGTGCACaatcgaataaaatatttgaagatTTTATTAAAGTAACAAATTTAAATAGTAAAGGATTGAATTTAAAGAAAGTGGTGGAAGCCTTGAagtatttaaaagaaaaatactgTATCGAATACAACATGTTCGGAATAGGAGAAATAGCATGTACGTTTATCGCATCAAAGTTAGAAGATTATCTTTACCTTTGGAACCCTTTGTGTCAGCCCACCTTACCACTCTCTTTATTTGAAGAATGGaaagaaattttagaaaatgaaGCCTTTTACAATGATAAACTATGTACGACTTTGTACGATAAATTGGTTTGGGATTCTTGGATGCTATCTGTAGAAATTGCTATACAAAAATGGATGTGTTACCAACCAGAAAGGTTAGTTCATCTGATGAAGCTTTGGAAAAACATATTACCCTCCCggattttagaaaatattttagaaataatatttcaaaaattgaaatctaCAGTAGAACAAGAATGGAGTCCAATTACAGATAAACTACCCATACGTACATGGATTCATCCATGGTTACGATTCACACATACGATGCACGAGAAAATAATTGCTGAAATATTTCcaataattcatgaaaaactTGGAAATATTGTTGTATATTGGGATTCCTCAGTTTCCAAAGAGGATATTGATAACTGCTATAGCGAATGGTATAATTTGTGTAATGATAAACAACTTGCTCAGTCCGTAATCAAAGAGCCTCCGTTCAAAATAGTATTTTATCACAGTCAAGAAGAAGATTCTGAAGGATCGGAAATGTCTCGATTTGAAGAATGA
- Protein Sequence
- MAHKKVEVSAVGFGDNDSDDLLTKPSCKRQRLKLEEVGSVAKKFKDCTEATKSSYQRQQLQPENRSSILYYSDDDSDSAESFEDCTEATKSYYQYENALEKQQELDDKAVSDDETIIASTCKESQQCAQSNKIFEDFIKVTNLNSKGLNLKKVVEALKYLKEKYCIEYNMFGIGEIACTFIASKLEDYLYLWNPLCQPTLPLSLFEEWKEILENEAFYNDKLCTTLYDKLVWDSWMLSVEIAIQKWMCYQPERLVHLMKLWKNILPSRILENILEIIFQKLKSTVEQEWSPITDKLPIRTWIHPWLRFTHTMHEKIIAEIFPIIHEKLGNIVVYWDSSVSKEDIDNCYSEWYNLCNDKQLAQSVIKEPPFKIVFYHSQEEDSEGSEMSRFEE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -