Basic Information

Insect: Trichogramma dendrolimi
Gene Symbol: gtf3a_1
Assembly: GCA_034770305.1
Location: JAPMIB010000006.1:2330888-2334939[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 1.1 40 5.7 3.4 1 23 618 640 618 640 0.97

2 16 2.4 88 4.6 0.1 1 19 646 664 646 667 0.80

3 16 0.0011 0.04 15.1 1.5 3 23 703 724 702 724 0.97

4 16 0.031 1.1 10.6 4.6 1 23 731 754 731 754 0.97

5 16 0.00016 0.006 17.7 1.6 1 23 760 783 760 783 0.91

6 16 4.2 1.5e+02 3.9 1.5 2 23 791 811 790 811 0.95

7 16 2e-05 0.00075 20.6 1.3 3 23 818 838 816 838 0.97

8 16 1.6e-06 5.9e-05 24.1 0.2 1 23 844 866 844 866 0.99

9 16 0.003 0.11 13.8 2.5 2 23 878 900 877 900 0.95

10 16 0.077 2.8 9.3 1.2 1 23 906 929 906 929 0.96

11 16 0.22 8.2 7.9 1.5 3 23 953 974 952 974 0.94

12 16 0.0013 0.047 14.9 0.5 2 23 981 1003 980 1003 0.97

13 16 0.00078 0.028 15.6 0.6 2 23 1011 1032 1010 1032 0.96

14 16 0.046 1.7 10.0 1.1 1 23 1038 1061 1038 1061 0.94

15 16 4.6 1.7e+02 3.7 4.3 2 23 1068 1089 1067 1089 0.96

16 16 0.013 0.49 11.7 2.3 1 23 1095 1117 1095 1117 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	1.1	40	5.7	3.4	1	23	618	640	618	640	0.97
2	16	2.4	88	4.6	0.1	1	19	646	664	646	667	0.80
3	16	0.0011	0.04	15.1	1.5	3	23	703	724	702	724	0.97
4	16	0.031	1.1	10.6	4.6	1	23	731	754	731	754	0.97
5	16	0.00016	0.006	17.7	1.6	1	23	760	783	760	783	0.91
6	16	4.2	1.5e+02	3.9	1.5	2	23	791	811	790	811	0.95
7	16	2e-05	0.00075	20.6	1.3	3	23	818	838	816	838	0.97
8	16	1.6e-06	5.9e-05	24.1	0.2	1	23	844	866	844	866	0.99
9	16	0.003	0.11	13.8	2.5	2	23	878	900	877	900	0.95
10	16	0.077	2.8	9.3	1.2	1	23	906	929	906	929	0.96
11	16	0.22	8.2	7.9	1.5	3	23	953	974	952	974	0.94
12	16	0.0013	0.047	14.9	0.5	2	23	981	1003	980	1003	0.97
13	16	0.00078	0.028	15.6	0.6	2	23	1011	1032	1010	1032	0.96
14	16	0.046	1.7	10.0	1.1	1	23	1038	1061	1038	1061	0.94
15	16	4.6	1.7e+02	3.7	4.3	2	23	1068	1089	1067	1089	0.96
16	16	0.013	0.49	11.7	2.3	1	23	1095	1117	1095	1117	0.98

Sequence Information

Coding Sequence: atgtctgaaaacAAATGTAAAGATGGAAAATCTGCAAAATTCTCCTCTCCAAGTAAAGTAAAGAAGAAAGCCATTATGTCACCAAaaaaagaaaattcaccaaaattatttaaatttcaaaatattaaagatGAATTGACGATAGAAGCAGATCAAGAAATTagcaattataatatttttaaaaatgaattgattCAAAGTGCTGAAGAGCAATCTGATAATCATATTAGCgattctaaaatttcaaatgatctAGAATATATTGgtttagaaattaaaaatttaaatgatttaaaaaaagttactccTCAAATTAAATTGTCATCATCCAAAATGTCATCGCCTTCTACTTTATCGTCATCGTACATATTGAATGATTCGCAAAAGAAACTACATAATTATTGCAGAACATGTGCTGAATTAAAACTTCCTTTAATAGATATATTTAGTGACGAAGGAACAGAAATGCAGTTAAACGAACAATTGCAGTATTTTGAAGAGATTGATGAATTTAGTTTATCTACAAAAATGTGTATCGAATGTATTAAGAATTTGGAAACAAGTTATAAGTTTTtgatgcaaataaaaaatgcagaaGTTAAACTTCAATCTATATGGGAATCTTGTCCAGAATCTCAACTTAATGAGTTGGAAGAAGATTATTCGGAGCATTACctaaatgaagaaaatgagagctctgaatctttttttgacCAAACTGAAACATTTGaagaatcaaatgaaaatattacataTGATGAATGTGAACCAGATGATTCAAACGATATTGATCAAAGCTTACAATCAAATTATGATAACAGTGAAACTGAAAATTGTGAGTATAACTTTGATGAAAGTCAAAGAACAGATGACAATCAAACTAACATAAAGAATGAATCAGAGGAAATATtggataatgaaaaaaacaactctatgaaaaatacaattcCACCTTCACAAATATTTTGCgatgtaaaagaaaatatagaaaaagatGAGAGCTTTGCCAATGCAGATAatggcaatgaaaaaaataaattaatactagctttaaaagaaatgaaaattccaaaattgaACTTTGATGACGTGATCAATGTAGAGGAGGGTGAAAATGGAATAATGTATGTCACTACTAAAGGATCGAAACCTAATGAGCTGCTTCTgttgaaagttaaaaaaatggaaaagtcGACTAAAAAGGacgaaaagggaaaaaagtcCTCTAAAACCCATTCACAAAATAAAGCACAGCATCTCAGACCTTCAAATTTACCAGGAAATAATATCGACGATGAAATCgagaagtataaaaaaaaacgcgttgAAATTTTAGGAGAAGGGGCCGATATGATCGTCGAAGAGGAACCCAGTGAAGTAATAGACAATAGAGGTTTCGCCGGTAACTTGGGTGATACCGGATGTACAGAGAACACGAAAACCATCAAAGAAGAACCCGAAGATGCAGACGATCCGCTTTTTCTAGCCGCAAGTACATCCACAAGTTCATCCGCGAGTACGATCGCGGTATCGAAAAGTTCGAGTTCTATGGACGAGTTACGCGAAAAGTACAACGCAATTAGAAAGCAGAACGACTTTTTCGAGAGAGAATTATCGATCGAATTCAAGGACAGATTGAAGAGAATACTTCGACAGAAAAACGAATACATCGAGGACTTCGTGAAGTACTTGAATCAGCGAAAAATCGTGGCGTCGAGATTGAAAACGGAAGACATCATACTGTTGTACGAGAAGAAGAACAACGTGAAAATCGACAGATCGGCGATCGAGGACGAGGGCCCCCCCCTGGAGGAGGTCGCGGAGGAAAAACTGGACGAGGACAAGGAGGCGTACGACTGCGACTTCTGCTTCAGATTCTTCTACTCCGTGGACATGCTGCACGAGCACTCGAAGATGCACGACGTGCGCATCCAGTATCTGTGCAGCGACTGCGGCGTCGAGTTCTCCACGGGCAAGGCGCGCCGCGAGCACAACGCCACCTGCGTGCAGAAGCTCATCTGCAAGGGCTGCGGCGAGCTGCAGGAGTCCAAGGGCAAGAAGCGCCAGCACGAGCAGAAGCACTGCGACGAGAGCTACGGCCAGCTCTGCGACACCTGCGGCGAGAAGTTCAAGCACCAGGGCACCCTCGACCAGCACATCAAGGTGAAGCACATGGAGCTGGGCAAGGTGCACAAGTGCCCCGAGTGCTCCAAGGAGTTCACCTTCAAGACCAAGATGACGTTCCACATGAAGACGGTGCACACGACGGTGCGCGCCTTCCTCTGCGAGGACTGCGGCAAGGACTTCAAGAATCCGGCGAGTCTGCGCCATCACAAGGTGCGCAAGCACCTCGAGCCCAACAGCCGCAAGGAGTGCAAGATCTGCAAGAAGATGATACCGGCCTACGGCATGTCCAAGCACATGCACACCCACAAGGCCTACACGATCGCCTGCACGCGCTGCGACAAGATGTTCAAGAACACCTCGACCCTCAAGCAGCACCTGCGCATCCACGAGGACCAGCGACCGTACAAGTGCAACGAGTGCGGCGTGGGCTTCAACAGGCGCGACGGCCTCAGGCTGCACATGCGCGTCCACCAGAAGAGCAACTCGCGCGGTCTGCGCGAGTGCATCTGCCAGGTCTGCGGCGAGAAGTTTCCCAATCACTCGACCCTCGTCATACATCGCAATCGCACGCACAAGGACGGACGCACCTTCACCTGCCACCTGTGCAATCGCTCGATGATCTCGCAGCGCTCGCTCGACTGGCACCTGTCCAGCATACACAACGAGGTGCTGCCCGAGCGACCCGAGAAGGAGGAATCGGCCGTGGACACCGAGACGAAGCGCGTCGCCTGTCTCAAGTGCAGCAAGACCTTCAAGACCGAGACGATACTGCGCACCCACGTGAAGAACAGCCACACGGAGAAGAAGCCCCAAAAGTGCCCGGACTGCGACGTCATCTTCACCTCGGACGTGCGCCTCAAGCATCACATGATGGTCGAGCACGAGCGCCTCGAGGGCACCCAGAAGTGTCCCTTCTGTCCCAAGCGCTTCGTCAATCAGCTCCGACTCAAGACCCACATGATCGCGCACTCGGAGGAGCGTCCGTTCGCCTGCGACCAGTGCGACTTCATGCTCAAGACGCGCATACAGCTGATCAAGCACAAGCAGAATCGGCACAGCGACGAGAGGCCGCTGCAGTGCCGCTATTGCACCTGGCGGTGCAAGCAGGTCAGCGCCCTGGTCTGTCACGAGCGCACCCACACGAACGAGCGCCCCTACAGCTGCAGCGTCTGCCAGCAGCGCTTCAAGTATCTCGGCGACAAGAACAAGCACGAGCGCAGGCACGAGAGTCTGGGCGGCAGCGGCTTCAAGCGCATCGCCATCGGCAAGAGCGGCGtcggcagtggcagcagtgGCGAGAAGACCGAGGACCAGAGCGGCTTCGATTCGGACGCGGACGCGGTCGAGACGCACGACGAGAAGCAGGACGGCACCGTTTACAACTTGAACGACGAGATCGACACCTTCGACGAGTCCAGAATCATCAAATTCGAAACTGGTGAAATCGTGGCCGAGTCCGAGGCAACGTTCGAGCCTATGTACGTCGAGGAAGCTGAACACGACAATAACTCTGGCACGGTCGTAGTTGGCTTCGAAGACGCCACAGTTTACACGGAAGAAGTCACTACAGTACCCATGGAAACAGAGATAATAACGAGCGATATGATAGATCAGCAGATTTTGCAACCAGGCACAGTCGTCCATCTTCAACAGCAGGATAGCAATGGAAAGATCCAGGTCATTCCAGTCATGCTGTCCTTGCCGGATCTAGGCGATCCCGGGGAAGTCAGTTTAGCTGCCACTTCCATCATGTACAAAGAATAA
Protein Sequence: MSENKCKDGKSAKFSSPSKVKKKAIMSPKKENSPKLFKFQNIKDELTIEADQEISNYNIFKNELIQSAEEQSDNHISDSKISNDLEYIGLEIKNLNDLKKVTPQIKLSSSKMSSPSTLSSSYILNDSQKKLHNYCRTCAELKLPLIDIFSDEGTEMQLNEQLQYFEEIDEFSLSTKMCIECIKNLETSYKFLMQIKNAEVKLQSIWESCPESQLNELEEDYSEHYLNEENESSESFFDQTETFEESNENITYDECEPDDSNDIDQSLQSNYDNSETENCEYNFDESQRTDDNQTNIKNESEEILDNEKNNSMKNTIPPSQIFCDVKENIEKDESFANADNGNEKNKLILALKEMKIPKLNFDDVINVEEGENGIMYVTTKGSKPNELLLLKVKKMEKSTKKDEKGKKSSKTHSQNKAQHLRPSNLPGNNIDDEIEKYKKKRVEILGEGADMIVEEEPSEVIDNRGFAGNLGDTGCTENTKTIKEEPEDADDPLFLAASTSTSSSASTIAVSKSSSSMDELREKYNAIRKQNDFFERELSIEFKDRLKRILRQKNEYIEDFVKYLNQRKIVASRLKTEDIILLYEKKNNVKIDRSAIEDEGPPLEEVAEEKLDEDKEAYDCDFCFRFFYSVDMLHEHSKMHDVRIQYLCSDCGVEFSTGKARREHNATCVQKLICKGCGELQESKGKKRQHEQKHCDESYGQLCDTCGEKFKHQGTLDQHIKVKHMELGKVHKCPECSKEFTFKTKMTFHMKTVHTTVRAFLCEDCGKDFKNPASLRHHKVRKHLEPNSRKECKICKKMIPAYGMSKHMHTHKAYTIACTRCDKMFKNTSTLKQHLRIHEDQRPYKCNECGVGFNRRDGLRLHMRVHQKSNSRGLRECICQVCGEKFPNHSTLVIHRNRTHKDGRTFTCHLCNRSMISQRSLDWHLSSIHNEVLPERPEKEESAVDTETKRVACLKCSKTFKTETILRTHVKNSHTEKKPQKCPDCDVIFTSDVRLKHHMMVEHERLEGTQKCPFCPKRFVNQLRLKTHMIAHSEERPFACDQCDFMLKTRIQLIKHKQNRHSDERPLQCRYCTWRCKQVSALVCHERTHTNERPYSCSVCQQRFKYLGDKNKHERRHESLGGSGFKRIAIGKSGVGSGSSGEKTEDQSGFDSDADAVETHDEKQDGTVYNLNDEIDTFDESRIIKFETGEIVAESEATFEPMYVEEAEHDNNSGTVVVGFEDATVYTEEVTTVPMETEIITSDMIDQQILQPGTVVHLQQQDSNGKIQVIPVMLSLPDLGDPGEVSLAATSIMYKE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01485510; iTF_01484128; iTF_01481853;
90% Identity: iTF_01485510;
80% Identity: -