Tden005702.1
Basic Information
- Insect
- Trichogramma dendrolimi
- Gene Symbol
- -
- Assembly
- GCA_034770305.1
- Location
- JAPMIB010000013.1:1666702-1668063[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 9 0.05 9.9 7.1 4.7 14 43 133 159 127 164 0.86 2 9 0.4 78 4.2 2.7 14 38 161 182 156 188 0.72 3 9 0.013 2.5 9.0 0.4 19 43 194 215 190 216 0.93 4 9 0.56 1.1e+02 3.7 0.8 19 43 222 243 219 244 0.78 5 9 2.2e-05 0.0044 17.8 1.6 1 44 233 272 233 272 0.87 6 9 0.0007 0.14 13.0 1.0 19 44 278 300 275 300 0.93 7 9 0.081 16 6.4 0.5 18 43 305 328 303 329 0.79 8 9 0.38 75 4.2 0.9 13 29 329 345 321 357 0.71 9 9 0.5 99 3.9 2.4 18 44 362 385 351 385 0.88
Sequence Information
- Coding Sequence
- ATGGAATCAAGCGATATGTTCAATTGTCTTGTCAGGGTGAAAGAGGAGCCCAGTGATGTGTCGCCCAGTGGgaataattatgaaatgatTGACGAGAAACCCGATCTGATAAACTTCCAACTGTTATCATTTACGCCGGAAAATGCACGGATCCATAACCTTCGAAAATGTGACGGAAATCATAAAAGTAAAGTcaataacgacttgaaaatAGTATTTGAGTGTGAAGATGTGAAACCcaatattaatttatcaatagtTAAGAAAATTGACGAATTGCAGAATGAAAAAGATGGCAACGGTTGTAATACTCAAAACATAAGTAAAATAGACCCCGTAGGAGAAGTGAAACAGGAGATTTTTGCCGAAGTAATTGCAAAAAGTGTTGTGCATAATGAAAAAACCCACGAATGTAAAGTATGTAGAAAGAAATTCTCAAGTAAGAGTTATCTGAAAACGCACATTGATACGATTCATAATGGTACACGCCACGTATGTGATAGTTGcggaaagtcattttcacgAAAAGGTCATCTCAAAATCCATATCAATGCGGTGCATAACGATGTTACTCATGCATGCGAtatttgcgaaaagaaattctcacTGAAGAATGTTCTCAAGACACACATCAAGTCGGTGCATGATAAAATCACTCATGCGTGTGATATGTGCGAAAAGAAGTTCTCTCATAAGAGCGCTgtcaaaaaacacatcgatgcagtgcataataaaatcattcatgaatgtgatatttgcggaaagaagtACTCGCAGAAGAGTGATCTCAAAAGACACATTGATGCagcgcacaatggtgtcacacataattgtgatatttgcggaaagaagtACTCGCAGAAGACGGATCTCAAAAGACACATTGATGCAGCGCACAATAGTGTCACACGTACTTGTGAtatatgcaaaaagaaattctcCAGTATCGGCAATCTAAAAAAACAGCACATCGATTCCGTGCATGATAAAATTGTacatgaatgtgatatttgcggcaAGTCATTTACTCAAAGAGTAagtctcaaaattcacattgaCGCAGTGCACAATGGAGTCATACATACATGTGGAAACTGCAGGAAAGAATTCACAACTAAGGGTAATCTCCAAGTTCACATCAGGGCGAATCATAATGGTATCAGTCATGCATGCAATGTATGCAGCAgaacattttacaaaaaagtaaactaA
- Protein Sequence
- MESSDMFNCLVRVKEEPSDVSPSGNNYEMIDEKPDLINFQLLSFTPENARIHNLRKCDGNHKSKVNNDLKIVFECEDVKPNINLSIVKKIDELQNEKDGNGCNTQNISKIDPVGEVKQEIFAEVIAKSVVHNEKTHECKVCRKKFSSKSYLKTHIDTIHNGTRHVCDSCGKSFSRKGHLKIHINAVHNDVTHACDICEKKFSLKNVLKTHIKSVHDKITHACDMCEKKFSHKSAVKKHIDAVHNKIIHECDICGKKYSQKSDLKRHIDAAHNGVTHNCDICGKKYSQKTDLKRHIDAAHNSVTRTCDICKKKFSSIGNLKKQHIDSVHDKIVHECDICGKSFTQRVSLKIHIDAVHNGVIHTCGNCRKEFTTKGNLQVHIRANHNGISHACNVCSRTFYKKVN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01482963;
- 90% Identity
- iTF_01482963;
- 80% Identity
- iTF_01482963;