Tden015813.1
Basic Information
- Insect
- Trichogramma dendrolimi
- Gene Symbol
- -
- Assembly
- GCA_034770305.1
- Location
- JAPMIB010000069.1:922733-924223[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 9 0.38 75 4.2 0.3 3 31 153 180 151 189 0.76 2 9 0.0077 1.5 9.7 0.3 19 44 196 218 185 218 0.93 3 9 0.23 45 4.9 0.9 19 43 224 245 221 246 0.82 4 9 0.3 58 4.6 0.3 18 43 251 273 248 279 0.76 5 9 0.00085 0.17 12.7 0.7 19 44 280 302 275 302 0.95 6 9 0.075 15 6.5 2.2 19 43 308 329 305 330 0.91 7 9 1.3 2.5e+02 2.5 0.1 19 29 336 346 334 349 0.88 8 9 0.0032 0.63 10.9 0.7 18 43 351 373 346 374 0.88 9 9 0.00072 0.14 13.0 3.4 1 44 363 402 363 402 0.93
Sequence Information
- Coding Sequence
- ATGGAATCTGGCGATTTGTTCAACCGTACCCtcagAGTGAAAGTTGAGCCTTGTGATGTTTCGTTTACcgaaaatgattataaaaccATCGACGAGATACCCGTAACCGAAAATGTCAAGTACGAAaagtttcttcaagaaaactcgacCCAAGAGCTTCAAAAATATGacgaaaatcaagaaaatgaCGACTTGCAAATCGATTTGGAATGTACAAACATGAAGCCCAATTTATTGACAGTGTCGAAAATTGAAGATTACTATTTAAATCACAGGCAAGATATAGCGAAATATAGCGATGATTATAAAGCTGAACGACCAATTAAATTAGAAGCTGTGTGGACGGTGAAGAAAGAATTTTGTGGCGAAGAAGATACTGAGTCGAATTTCGGACGTGGACTCAGCAAGCAAAATGAAAGAGgaagtatttcaaaaaagtcGAACTATAAAATGAATCTCAAAGCACACGTGGGTATGGTGCAAAGTGGTATCAACAATACATGCGATACATGCCAAAAGACGTTCGCAACGAAAGGTAATCTTAAAACCCAAATCGAATCAGTGCATCATAAAATTACGCATCCATGTGATGTATGCCAAAAGACAATCTCAGACAAGAGTAATATCAGAAATCACATCGATTCTGTGCATAATGGTGACAGACATGCGTGCGATATTTGCCAAAAGACGTTCACACAAAAAGGTAGTCTCAAAATACATATCGAATCGGTGCATAATGGTGCCAGTTATGCATGCgatatttgcaaaaatgattttaaacgaAAAGGCGATCTCAAAACTCACGTCGATTCGGTGCATCGTAAAATAAGGCATccatgtgatatatgccaaaagacattctcagACAAGAGTAATCTAAATAAACACATAAATTCGGTGCATAATAGTGTCAGACACGCATGCGAcatttgcggaaagaaattcgtaaaaaaaggtaatctcaaaatccacatcgagtCAGTACATCATGAAATCACGCATCCATGcgatatatgccaaaagacattctcaaCCAAGGGTATCATCTACGCATGTGATTACTGTGGAAAAACATACAAACAATTCTCTAATCTCCTAAAACACGTCCAATTGTCGCATATTAATACCACCTATACTTGCGACACATGCGGAAAGACATTCCGGTATAAACAAAATCTCAAAGCCCATGTGAAAATGGCGCATCGCCCACGCATCGTGACTTAA
- Protein Sequence
- MESGDLFNRTLRVKVEPCDVSFTENDYKTIDEIPVTENVKYEKFLQENSTQELQKYDENQENDDLQIDLECTNMKPNLLTVSKIEDYYLNHRQDIAKYSDDYKAERPIKLEAVWTVKKEFCGEEDTESNFGRGLSKQNERGSISKKSNYKMNLKAHVGMVQSGINNTCDTCQKTFATKGNLKTQIESVHHKITHPCDVCQKTISDKSNIRNHIDSVHNGDRHACDICQKTFTQKGSLKIHIESVHNGASYACDICKNDFKRKGDLKTHVDSVHRKIRHPCDICQKTFSDKSNLNKHINSVHNSVRHACDICGKKFVKKGNLKIHIESVHHEITHPCDICQKTFSTKGIIYACDYCGKTYKQFSNLLKHVQLSHINTTYTCDTCGKTFRYKQNLKAHVKMAHRPRIVT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01483002;
- 90% Identity
- iTF_01483002;
- 80% Identity
- iTF_01483002;