Basic Information

Insect: Trichogramma dendrolimi
Gene Symbol: -
Assembly: GCA_034770305.1
Location: JAPMIB010000006.1:2502290-2504167[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.028 5.5 7.9 1.5 15 43 156 181 143 182 0.77

2 14 0.0035 0.68 10.8 1.0 19 44 188 210 185 210 0.93

3 14 0.081 16 6.4 2.0 18 43 215 237 213 238 0.87

4 14 0.046 9.1 7.2 1.3 18 43 243 265 241 266 0.93

5 14 0.032 6.2 7.7 2.4 18 43 271 293 269 294 0.81

6 14 0.21 41 5.1 1.6 18 43 299 321 297 322 0.93

7 14 0.1 20 6.1 1.3 18 43 327 349 325 350 0.83

8 14 0.43 84 4.1 2.2 18 38 355 372 351 382 0.71

9 14 0.084 17 6.3 0.4 18 44 383 406 378 406 0.91

10 14 0.25 50 4.8 0.4 19 38 412 428 410 434 0.70

11 14 0.0021 0.41 11.5 2.6 18 43 439 461 425 462 0.89

12 14 0.089 17 6.3 1.3 19 44 468 490 465 490 0.88

13 14 0.02 4 8.3 2.5 19 44 496 518 494 518 0.92

14 14 0.00077 0.15 12.9 1.4 3 44 537 574 535 574 0.82

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.028	5.5	7.9	1.5	15	43	156	181	143	182	0.77
2	14	0.0035	0.68	10.8	1.0	19	44	188	210	185	210	0.93
3	14	0.081	16	6.4	2.0	18	43	215	237	213	238	0.87
4	14	0.046	9.1	7.2	1.3	18	43	243	265	241	266	0.93
5	14	0.032	6.2	7.7	2.4	18	43	271	293	269	294	0.81
6	14	0.21	41	5.1	1.6	18	43	299	321	297	322	0.93
7	14	0.1	20	6.1	1.3	18	43	327	349	325	350	0.83
8	14	0.43	84	4.1	2.2	18	38	355	372	351	382	0.71
9	14	0.084	17	6.3	0.4	18	44	383	406	378	406	0.91
10	14	0.25	50	4.8	0.4	19	38	412	428	410	434	0.70
11	14	0.0021	0.41	11.5	2.6	18	43	439	461	425	462	0.89
12	14	0.089	17	6.3	1.3	19	44	468	490	465	490	0.88
13	14	0.02	4	8.3	2.5	19	44	496	518	494	518	0.92
14	14	0.00077	0.15	12.9	1.4	3	44	537	574	535	574	0.82

Sequence Information

Coding Sequence: ATGGATCCTAGTAGTACATTTGACTCTGCTATCagaataaaaaaggaaCCCGTTGATACATCGCTCATTGAATATGATAACAATGTGATTGACAAGCATCCTGatgttgataattttcaattctcaAGGCTTCTGCAAGGATATTCGACGCTTCAAGAATGTAAACAAAATCATGATAATGGACTTGACGAGATCAAAGTTGAAATCGAATGTAGGGACGTGAAGCCCGAATTTAACTTATTAGCAGTTACGAAAATTGAGGATTGTACTCAACATCGATTGCAGCATATGAAATATAACGACGAATACACAAGTCAAAACATCATAAAAACAGAAACTGTGAGTAAAATAAAGGAAGAAATTAATTCGAATTTCGATCTTGAACTTGACGAGAGAAACGAAAAGAGCAAAAAGCTCAACAATATCGATAGAGTCAAAACCCACATTGGTACGTTGAATAGCGGGGCAGTCCATGTATGCAAAACATGCGGAAAGACGTTTAAACAAAAGAGTCATCTGAATAATCATGTTGAATCAACGCATGATGGTGTCACTCactcatgtgatatttgcgaaAAGACGTTTTCCAAAAAAggtaatctcaaaactcacatcgatactgtgcacaatggtgtcacacatACGTGCAATACGTGTGGAAAGTCATTTACTCAAAAAAGTAGTCTCAAAACTCATATGGATAttgtgcacaatggtgtcacacatACGTGCAATACGTGTGGAAAATCATTCACTCAAAAAAGttatctcaaaactcacatcggTACTGCGCACGATGGTGTCACACATACGTGCAATACgtgtggaaagacattcaaACGAAAAGATATTCTCAAAACCCACATCGGTActgtgcacaatggtgtcaggCAAACATGTATGACATGTGGAATGACGTTTCAACGCAAGAGTCATCTGGATAGGCATGTTAAATCAACGCATGATGGTgtcacacatacatgcaatacgtgtggaaagacattcactcaaaATAGTAgcctcaaaatccacatcgatacGTTACATAATGGGGTCAAATGTGCATGTGACatatgcggaaaaaaatttacgagtaAGGgttatctcaaaatccacatcgattcggtgcacaaCGGTGTTAAACATTCATGTGATATCTGCGGAAAGTTatttactcaaaaaattaatctccAAACTCACATCGATTCGATGCACAACGGTGTCACTCATGCATGTGACatatgcggaaaaaaatttacgagtaAGGgttatctcaaaatccacatcgattcggtgcacaatggtgtcgCCACTACTTGTGATATATGCAGAAAGAAATTCTCAACGAAAGGCAATCTCAAACAACATATAGATTCGATGCATCATAAAGTCActcatgcatgtgatatttgcggaaagtcattttctaaaaaaattagtctcaaaactcacatcgatTCGATGCACAACGGTGTCACTCATGCATGTGACATGTGCGGAAAGACATTCAACCGAAAATATAATCTCAAACATCACATTGATGCGGTGCATAATGGAATCATCCACGCATGCGATAGGTGTGATATGACTTTTAAACGTAAGGACAAGCTGAAgatccacatcgattcggttgATCGTTGTTCAACTCACGCTTGTGGAGTATGCGGAAAAAATttcggacgaaaaaaaaatctcattgcCCACATGGATATGGCTCATCGCTCATGTGCAACGACCCAATAA
Protein Sequence: MDPSSTFDSAIRIKKEPVDTSLIEYDNNVIDKHPDVDNFQFSRLLQGYSTLQECKQNHDNGLDEIKVEIECRDVKPEFNLLAVTKIEDCTQHRLQHMKYNDEYTSQNIIKTETVSKIKEEINSNFDLELDERNEKSKKLNNIDRVKTHIGTLNSGAVHVCKTCGKTFKQKSHLNNHVESTHDGVTHSCDICEKTFSKKGNLKTHIDTVHNGVTHTCNTCGKSFTQKSSLKTHMDIVHNGVTHTCNTCGKSFTQKSYLKTHIGTAHDGVTHTCNTCGKTFKRKDILKTHIGTVHNGVRQTCMTCGMTFQRKSHLDRHVKSTHDGVTHTCNTCGKTFTQNSSLKIHIDTLHNGVKCACDICGKKFTSKGYLKIHIDSVHNGVKHSCDICGKLFTQKINLQTHIDSMHNGVTHACDICGKKFTSKGYLKIHIDSVHNGVATTCDICRKKFSTKGNLKQHIDSMHHKVTHACDICGKSFSKKISLKTHIDSMHNGVTHACDMCGKTFNRKYNLKHHIDAVHNGIIHACDRCDMTFKRKDKLKIHIDSVDRCSTHACGVCGKNFGRKKNLIAHMDMAHRSCATTQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01482693;
90% Identity: iTF_01482802;
80% Identity: iTF_01482802;