Tden017301.1
Basic Information
- Insect
- Trichogramma dendrolimi
- Gene Symbol
- -
- Assembly
- GCA_034770305.1
- Location
- JAPMIB010000080.1:199773-201262[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.0022 0.43 11.4 1.5 18 44 116 139 112 139 0.88 2 12 0.15 29 5.5 1.1 17 44 143 167 140 167 0.90 3 12 0.027 5.2 7.9 2.8 19 44 173 195 170 195 0.92 4 12 0.023 4.5 8.1 2.7 15 44 197 223 195 223 0.91 5 12 0.054 11 6.9 0.6 17 29 227 239 225 255 0.84 6 12 0.044 8.6 7.2 1.5 19 43 257 278 251 279 0.90 7 12 0.028 5.6 7.9 1.7 19 33 285 306 283 312 0.68 8 12 0.61 1.2e+02 3.6 3.1 18 29 312 323 296 339 0.75 9 12 0.002 0.4 11.5 0.5 19 44 341 363 338 363 0.94 10 12 0.083 16 6.4 1.4 19 29 369 379 367 395 0.75 11 12 0.033 6.5 7.6 0.5 19 43 397 418 394 419 0.87 12 12 0.00063 0.12 13.2 2.2 2 43 409 446 408 447 0.80
Sequence Information
- Coding Sequence
- atgaatagagttAAAAACTTTCATCTCTTACCAATTACGGCAGAAAATTCTacCCATACCCTTCGAACTTCTAACGTAAATTATGATGACGAAGTGGAAATAGTCGTTGAATGTGAAGACGTCAAGCCtgacattaatttattaacaGTTAAGAAAATTGGAGAAGATTCTCAGAATTTCTTGCAAAGCATAAAAGATGTCAATGGTGACATAactcaaaacaaaatgaaaaaagaagtctTAGAAAAAAGTCTAACCATGatcatggaaaaaaaacaccGATTCATACGTTGCATAGTAGAAGCATCCACACGTGTGACGCATATGCACAATGGTATCACTCatgaatgtaatatttgcgGTAAGACATTCACATCGAAAGGTTATCTTAAAACTCACATCAATACAGTGCACAATAGTGTCAGCAACACATGCGCTACGTGCGGAAAGTCATTTACACATAAGAGAAATCTGAAAGTTCACGTCGATACGGTGCACAATGGTATCATACATtcatgtgatatatgcggaaaaaaatgtttaactaAGAGTAATCTGAAATACCACCTGGATACATCACACAATGGCACCAaacatgcatgtgataaatgtggcaaattattttcacataaGTCTACTCTTAAAAATCACATCGATAcagtgcacaatggtgtcaaatatgtatgtgatatttgcggaaagaaattgtCAACAAAAGGATATCTTCAAATGCACATTGATACAGTGTACAATGGTATCACACATTCATGTGATATATGCagaaaatcattttcacaTAGATCCAATCTCAAAACGCACATCGATGATATCCACAATGGTATCACACATCCGTgtaatatttgcggaaagaaattgtCAACAAAACAGTATCTTCAAATGCACATTGATACAGTGCATAATCATATCACACattcatgtgatatttgcggaaagaaattgtCAACAAAAGGGTATCTTCAAATGCACATTGATACAGTACACAATGGTATCACACattcatgtgatatttgcggaaagaaattctcaaCCAAGAGTAATCTGAAAATCCACGTCGAGGCAATGCATAATGACATCACACACCCGTGTAAaatttgcggaaagaaattgtCAACAAAAGGGTATCTTCAAATACACATTGATACGATGCACAATGGTATCACACattcatgtgatatttgcggaaagaaattctcaaCCAAGAGTCGTATCAAAAAACACGTAGATGCAGCACATACAGGCATCACTCAAGCTTGTGGTatttgtgaaaagaaatttacacagaAGATAAATCTCAAAGCCCACCTTAATTCAGTTCATCATTCTCGCATTACAActcaatga
- Protein Sequence
- MNRVKNFHLLPITAENSTHTLRTSNVNYDDEVEIVVECEDVKPDINLLTVKKIGEDSQNFLQSIKDVNGDITQNKMKKEVLEKSLTMIMEKKHRFIRCIVEASTRVTHMHNGITHECNICGKTFTSKGYLKTHINTVHNSVSNTCATCGKSFTHKRNLKVHVDTVHNGIIHSCDICGKKCLTKSNLKYHLDTSHNGTKHACDKCGKLFSHKSTLKNHIDTVHNGVKYVCDICGKKLSTKGYLQMHIDTVYNGITHSCDICRKSFSHRSNLKTHIDDIHNGITHPCNICGKKLSTKQYLQMHIDTVHNHITHSCDICGKKLSTKGYLQMHIDTVHNGITHSCDICGKKFSTKSNLKIHVEAMHNDITHPCKICGKKLSTKGYLQIHIDTMHNGITHSCDICGKKFSTKSRIKKHVDAAHTGITQACGICEKKFTQKINLKAHLNSVHHSRITTQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01482857;
- 90% Identity
- iTF_01482857;
- 80% Identity
- iTF_01482857;