Basic Information

Insect: Trichogramma dendrolimi
Gene Symbol: -
Assembly: GCA_034770305.1
Location: JAPMIB010000004.1:1445124-1447155[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 5.1 1e+03 0.6 0.2 19 43 170 191 154 192 0.82

2 16 0.18 34 5.3 0.4 19 39 198 215 193 220 0.77

3 16 0.14 27 5.7 3.5 15 44 222 248 209 248 0.83

4 16 0.015 3 8.7 0.4 15 38 251 271 249 277 0.71

5 16 0.026 5.1 8.0 0.1 19 44 283 305 280 305 0.93

6 16 0.0011 0.21 12.4 0.6 15 44 308 334 306 334 0.89

7 16 0.016 3.2 8.6 0.4 19 44 340 362 338 366 0.89

8 16 1.8 3.5e+02 2.1 1.7 18 43 367 389 362 390 0.86

9 16 0.0073 1.4 9.7 1.5 18 43 395 417 388 418 0.87

10 16 0.89 1.8e+02 3.1 5.0 18 44 423 446 414 446 0.88

11 16 0.073 14 6.5 0.8 15 31 449 465 446 475 0.75

12 16 0.0024 0.48 11.3 0.1 19 44 481 503 478 503 0.94

13 16 8.7 1.7e+03 -0.1 0.6 18 29 508 519 504 530 0.83

14 16 0.022 4.3 8.2 1.7 15 43 532 557 519 558 0.75

15 16 1.2 2.4e+02 2.6 5.7 17 44 562 586 552 586 0.86

16 16 0.022 4.3 8.2 0.5 15 33 589 609 587 615 0.75

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	5.1	1e+03	0.6	0.2	19	43	170	191	154	192	0.82
2	16	0.18	34	5.3	0.4	19	39	198	215	193	220	0.77
3	16	0.14	27	5.7	3.5	15	44	222	248	209	248	0.83
4	16	0.015	3	8.7	0.4	15	38	251	271	249	277	0.71
5	16	0.026	5.1	8.0	0.1	19	44	283	305	280	305	0.93
6	16	0.0011	0.21	12.4	0.6	15	44	308	334	306	334	0.89
7	16	0.016	3.2	8.6	0.4	19	44	340	362	338	366	0.89
8	16	1.8	3.5e+02	2.1	1.7	18	43	367	389	362	390	0.86
9	16	0.0073	1.4	9.7	1.5	18	43	395	417	388	418	0.87
10	16	0.89	1.8e+02	3.1	5.0	18	44	423	446	414	446	0.88
11	16	0.073	14	6.5	0.8	15	31	449	465	446	475	0.75
12	16	0.0024	0.48	11.3	0.1	19	44	481	503	478	503	0.94
13	16	8.7	1.7e+03	-0.1	0.6	18	29	508	519	504	530	0.83
14	16	0.022	4.3	8.2	1.7	15	43	532	557	519	558	0.75
15	16	1.2	2.4e+02	2.6	5.7	17	44	562	586	552	586	0.86
16	16	0.022	4.3	8.2	0.5	15	33	589	609	587	615	0.75

Sequence Information

Coding Sequence: ATGGAATCGAGTGAAATGTTTAACTGTGATAtaagAGTGAAAGAAGAGCCAATCGATGTGTTGCTCGGTGAAAATGATTATATTGTAATTGACAAGACACCAGAtgtcaacaattttcaattactcaGGCATCCGCAAGAAAATCGAATTCAAAAATCTGACGATAATCACGAAAGTGAACTTGACGACTTGGCGATTGAGTTAGAATGTAAAGAAATGAAGCCGAACGTGGATTTATTAGCAGttacgaaaattgaaaattggtcTGAAGATCACTTGGTGGCTATTGAAAATAGTAATGAATATAAAACtcaaaacataattaaattaGAAGCTTTAGatgcagtaaaaaaagaatcactAGTGAACGACGTAAATCAATTGAATATCAATTCCAACTGCAAAATCAGCGAGCCAAAGAACAGAAAAACAGTcatcaaaaagtttaattttaatcataaacTGAAAAGACACACTGATCCAGCACGTGGTAATATAACCCTTCCTTGTGATACTTGTGGAAAGGCATTCagacaacaaaaatttctcaaagcCCATATCGACTCGGTGCACCATAAAATCACTCATGCCTGTGACACATGCGGAAAGACGTTCTCTCGCAAGAGTGTTCTCAAAATACACATCGATGCGATACATAATGGTAAAACATATGCATGCGATATCTGCGGAAAGACGTGTACTCAAAAAAGTTCTCTCCAAACCCACATCAACTCGGTTCATAATAGTCAAAAAAGTTACGAATGTGACGTGTGTGGCAAGAAGTTCTCGCGAAAGGATGTTCTGAAAACTCATACCGATTCCATGCATAAAGGCATCACCTACCCATGTGATTTTTGCGGAAAGGCGTTCTCGCTCAAGGGTAATCTCCAAACCCACATCAACTCGGttcataataatcaaaaaaataacgaatgtGACGTGTGTGGCAAGAAGTTCTCACAAAAGGGTACTCTGAAAACTCATATCGATACgatgcataatggtatcaccTACCCATGCGATAGTtgcggaaagacattttcCCAAAAAGGTAATTTGAAATCTCATATCGATTCGACTCATAACAATATCAGACATGAATGTGATACATGTGAAAAGTCATTCTCACATAAAAGTTACCTCAAAACACATATTGAAGCGATACATAATGGTAAAACTCCCACATGCGATATCTGCGGAAAGAAGTTCTCTAAAAAGAGCAATCTTAAAATACACATCGATGCGATACATAATGGTAAAACATATGCATGCGATATCTGCGGAAAGACGTGTACTAAAAAGAGTCATCTCCAAACCCACATCAACTCGGTTCATAATAGTCAAAAAAGTTACGAATGTGACGTGTGTGGCAAGAAGTTCTCGCAAAAGGGTACTCTGAAAACTCATACTGATTCGATCCATAAAGGCATCACCTACCCATGCGATTTTtgcggaaagacattttcCCAAGAAAGGAATTTGAAATCTCATATCGATTCGACTCATAACAATATCAGGCATGAATGTGATACATGTGAAAAGTCATTCTCACATAAAAGTTACCTCAAACATATTGAAGCGATACATAATGGTAAAACTCCCACATGCGATATCTGCGGAAAGAAGTTCTCTAAAAAGAGCACTCTTAAAATACACATCGATGCGATACATAATGGTAAAACATATGCATGCGATATCTGCGGAAAGACGTGTACTCAAAAGAGTCATCTCCAAACCCACATCAACTCGGTTCATAATAGTCAAAAAAGTTACGAATGTGACGTGTGTGGCAAGAAGTTCTCGCGAAAGTATGTTCTGAAAACTCATACCGATTCCATGCATAAAGGCATCACCTACTCACGTGATTATGTGGAAAGCTATTAA
Protein Sequence: MESSEMFNCDIRVKEEPIDVLLGENDYIVIDKTPDVNNFQLLRHPQENRIQKSDDNHESELDDLAIELECKEMKPNVDLLAVTKIENWSEDHLVAIENSNEYKTQNIIKLEALDAVKKESLVNDVNQLNINSNCKISEPKNRKTVIKKFNFNHKLKRHTDPARGNITLPCDTCGKAFRQQKFLKAHIDSVHHKITHACDTCGKTFSRKSVLKIHIDAIHNGKTYACDICGKTCTQKSSLQTHINSVHNSQKSYECDVCGKKFSRKDVLKTHTDSMHKGITYPCDFCGKAFSLKGNLQTHINSVHNNQKNNECDVCGKKFSQKGTLKTHIDTMHNGITYPCDSCGKTFSQKGNLKSHIDSTHNNIRHECDTCEKSFSHKSYLKTHIEAIHNGKTPTCDICGKKFSKKSNLKIHIDAIHNGKTYACDICGKTCTKKSHLQTHINSVHNSQKSYECDVCGKKFSQKGTLKTHTDSIHKGITYPCDFCGKTFSQERNLKSHIDSTHNNIRHECDTCEKSFSHKSYLKHIEAIHNGKTPTCDICGKKFSKKSTLKIHIDAIHNGKTYACDICGKTCTQKSHLQTHINSVHNSQKSYECDVCGKKFSRKYVLKTHTDSMHKGITYSRDYVESY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01482793;
90% Identity: iTF_01482793;
80% Identity: iTF_01482793;